Tableau information
Concept source: d4kk2a_ amino acid (a.a.) range (ASN10)(LYS67)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN10) (GLU31) H1
(ASP34) (TYR46) H2
(MET53) (LYS67) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 148.2° H2
H3 111.7° -75.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2h0ha1 : (GLU141) (GLY196) [view usage] : c.47.1.9 |Thioredoxin fold |Thioredoxin-like |DsbC/DsbG C-terminal domain-like |Thiol:disulfide interchange protein DsbG, C-terminal domain |Escherichia coli [TaxId: 562]
d2auwb2 : (GLY35) (GLY86) [view usage] : d.331.1.1 |NE0471 N-terminal domain-like |NE0471 N-terminal domain-like |NE0471 N-terminal domain-like |Hypothetical protein NE0471 N-terminal domain |Nitrosomonas europaea [TaxId: 915]
d3krfd_ : (PHE4) (GLY59) [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Mentha x [TaxId: 34256]
d4ilfa2 : (GLN131) (GLY178) [view usage] : c.47.1.9 |Thioredoxin fold |Thioredoxin-like |DsbC/DsbG C-terminal domain-like |automated matches |Salmonella typhimurium [TaxId: 99287]
d1d8ba_ : (ASN56) (ARG88) [view usage] : a.60.8.1 |SAM domain-like |HRDC-like |HRDC domain from helicases |HRDC domain from RecQ helicase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3etea2 : (PHE399) (HIS450) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |automated matches |Cow (Bos taurus) [TaxId: 9913]
d1vw4b_ : (ARG61) (LYS96) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, mitochondrial (54S or 39S subunit) |Saccharomyces cerevisiae [TaxId: 4932]
d2auwa2 : (GLY35) (GLY86) [view usage] : d.331.1.1 |NE0471 N-terminal domain-like |NE0471 N-terminal domain-like |NE0471 N-terminal domain-like |Hypothetical protein NE0471 N-terminal domain |Nitrosomonas europaea [TaxId: 915]
d1qo5e_ : (ARG303) (GLN354) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Human (Homo sapiens), liver isozyme [TaxId: 9606]
d1n71a_ : (THR118) (GLY151) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Aminoglycoside 6'-N-acetyltransferase |Enterococcus faecium [TaxId: 1352]
d3kmwa_ : (SER276) (ALA357) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1kdra_ : (ILE39) (THR93) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |CMP kinase |Escherichia coli [TaxId: 562]
d1sora_ : (ARG5) (GLY78) [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |Aquaporin-0 |Sheep (Ovis aries) [TaxId: 9940]
d1gbsa_ : (THR135) (HIS183) [view usage] : d.2.1.5 |Lysozyme-like |Lysozyme-like |G-type lysozyme |Lysozyme |Australian black swan (Cygnus atratus) [TaxId: 8868]
d1wira_ : (GLU53) (PRO91) [view usage] : g.37.1.5 |beta-beta-alpha zinc fingers |beta-beta-alpha zinc fingers |variant C2H2 finger |Protein arginine N-methyltransferase 3 |Mouse (Mus musculus) [TaxId: 10090]
d4g63a_ : (ASN32) (ILE69) [view usage] : c.108.1.23 |HAD-like |HAD-like |5' nucleotidase-like |Cytosolic IMP-GMP specific 5'-nucleotidase |Legionella pneumophila [TaxId: 272624]
d5r1ra1 : (ALA169) (GLY214) [view usage] : a.98.1.1 |R1 subunit of ribonucleotide reductase, N-terminal domain |R1 subunit of ribonucleotide reductase, N-terminal domain |R1 subunit of ribonucleotide reductase, N-terminal domain |R1 subunit of ribonucleotide reductase, N-terminal domain |Escherichia coli [TaxId: 562]
d3d9sc_ : (SER7) (ASN80) [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1b87a_ : (THR118) (GLY151) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Aminoglycoside 6'-N-acetyltransferase |Enterococcus faecium [TaxId: 1352]
d3j39k_ : (LYS126) (PRO163) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Drosophila melanogaster [TaxId: 7227]
d1n71b_ : (THR118) (GLY151) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Aminoglycoside 6'-N-acetyltransferase |Enterococcus faecium [TaxId: 1352]
d1t3ba1 : (ASN130) (GLY178) [view usage] : c.47.1.9 |Thioredoxin fold |Thioredoxin-like |DsbC/DsbG C-terminal domain-like |Disulfide bond isomerase, DsbC, C-terminal domain |Haemophilus influenzae [TaxId: 727]
d1r1ra1 : (ALA169) (GLY214) [view usage] : a.98.1.1 |R1 subunit of ribonucleotide reductase, N-terminal domain |R1 subunit of ribonucleotide reductase, N-terminal domain |R1 subunit of ribonucleotide reductase, N-terminal domain |R1 subunit of ribonucleotide reductase, N-terminal domain |Escherichia coli [TaxId: 562]
d1bf5a2 : (LEU464) (THR510) [view usage] : b.2.5.5 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |STAT DNA-binding domain |STAT-1, DNA-binding domain |Human (Homo sapiens) [TaxId: 9606]
d1qn2a_ : (ASP58) (LYS97) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Cytochrome ch |Methylobacterium extorquens [TaxId: 408]
d2r1ra1 : (ALA169) (GLY214) [view usage] : a.98.1.1 |R1 subunit of ribonucleotide reductase, N-terminal domain |R1 subunit of ribonucleotide reductase, N-terminal domain |R1 subunit of ribonucleotide reductase, N-terminal domain |R1 subunit of ribonucleotide reductase, N-terminal domain |Escherichia coli [TaxId: 562]
d3srza_ : (THR200) (SER243) [view usage] : c.68.1.0 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d3orya2 : (THR226) (GLN289) [view usage] : a.60.7.0 |SAM domain-like |5' to 3' exonuclease, C-terminal subdomain |automated matches |automated matches |Desulfurococcus amylolyticus [TaxId: 94694]
d1v57a1 : (GLU141) (GLY196) [view usage] : c.47.1.9 |Thioredoxin fold |Thioredoxin-like |DsbC/DsbG C-terminal domain-like |Thiol:disulfide interchange protein DsbG, C-terminal domain |Escherichia coli [TaxId: 562]
d2r7ca2 : (ILE75) (ASN120) [view usage] : d.216.1.1 |Rotavirus NSP2 fragment, N-terminal domain |Rotavirus NSP2 fragment, N-terminal domain |Rotavirus NSP2 fragment, N-terminal domain |Rotavirus NSP2 fragment, N-terminal domain |Simian 11 rotavirus [TaxId: 10923]
d3wyha_ : (THR135) (GLY184) [view usage] : d.2.1.5 |Lysozyme-like |Lysozyme-like |G-type lysozyme |automated matches |Struthio camelus [TaxId: 8801]
d1kpgd_ : (HIS173) (GLY219) [view usage] : c.66.1.18 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Mycolic acid cyclopropane synthase |CmaA1 |Mycobacterium tuberculosis [TaxId: 1773]
d1rqja_ : (PHE24) (TYR74) [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |Farnesyl diphosphate synthase (geranyltranstransferase) |Escherichia coli [TaxId: 562]
d2cxba_ : (GLU73) (VAL120) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Cytochrome c2 |Rhodobacter sphaeroides [TaxId: 1063]
d1rc2a_ : (MET1) (GLY74) [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |Aquaporin Z |Escherichia coli [TaxId: 562]
d3vpea_ : (TRP222) (LYS261) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Serratia marcescens [TaxId: 615]
d4llsb_ : (SER0) (LEU49) [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Roseobacter denitrificans [TaxId: 375451]
d3nw5a_ : (ASP1056) (TYR1136) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Insulin-like growth factor 1 receptor |Human (Homo sapiens) [TaxId: 9606]
d2h0ia1 : (GLU141) (GLY196) [view usage] : c.47.1.9 |Thioredoxin fold |Thioredoxin-like |DsbC/DsbG C-terminal domain-like |Thiol:disulfide interchange protein DsbG, C-terminal domain |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.2, i.1, c.68, c.108, a.128, d.157, c.66, d.144, c.37, c.47, d.2, b.2, d.108, a.3, f.19, a.60, a.98, g.37, d.216,
d.331