Tableau information
Concept source: d1xqrb_ amino acid (a.a.) range (PRO304)(SER350)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO304) (ARG311) H1
(LEU317) (LEU327) H2
(GLN335) (SER350) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 87.6° H2
H3 -92.2° -145.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1xqrb_ : (PRO304) (SER350) [view usage] : a.118.1.21 |alpha-alpha superhelix |ARM repeat |HspBP1 domain |Hsp70-binding protein 1 (HspBP1) |Human (Homo sapiens) [TaxId: 9606]
d1m5ns_ : (PRO440) (ALA485) [view usage] : a.118.1.1 |alpha-alpha superhelix |ARM repeat |Armadillo repeat |Importin beta |Human (Homo sapiens) [TaxId: 9606]
d3j39r_ : (LEU4) (GLY48) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Drosophila melanogaster [TaxId: 7227]
d3gg3b_ : (ARG780) (GLU826) [view usage] : a.29.2.1 |Bromodomain-like |Bromodomain |Bromodomain |P300/CAF histone acetyltransferase bromodomain |Human (Homo sapiens) [TaxId: 9606]
d1fafa_ : (ALA8) (ASN68) [view usage] : a.2.3.1 |Long alpha-hairpin |Chaperone J-domain |Chaperone J-domain |Large T antigen, the N-terminal J domain |Murine polyomavirus [TaxId: 10634]
d4a16a_ : (PRO446) (ARG485) [view usage] : c.69.1.1 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetylcholinesterase-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4f0zb_ : (ALA16) (ASN51) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calcineurin regulatory subunit (B-chain) |Human (Homo sapiens) [TaxId: 9606]
d1igla_ : (GLY10) (TYR59) [view usage] : g.1.1.1 |Insulin-like |Insulin-like |Insulin-like |Insulin-like growth factor |Human (Homo sapiens) [TaxId: 9606]
d1wyla_ : (GLN9) (LEU61) [view usage] : a.40.1.0 |CH domain-like |Calponin-homology domain, CH-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2afkh_ : (VAL216) (ASP249) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Nitrogenase iron protein |Azotobacter vinelandii [TaxId: 354]
d1s1ip_ : (LEU3) (GLY47) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3f46a2 : (MET305) (LYS341) [view usage] : a.100.1.11 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |HMD dimerization domain-like |5,10-methenyltetrahydromethanopterin hydrogenase, HMD |Methanocaldococcus jannaschii [TaxId: 2190]
d2r7ka1 : (GLY93) (SER123) [view usage] : c.30.1.8 |PreATP-grasp domain |PreATP-grasp domain |PurP N-terminal domain-like |5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP |Methanocaldococcus jannaschii [TaxId: 2190]
d2nxpb_ : (VAL198) (GLN255) [view usage] : d.379.1.1 |Taf5 N-terminal domain-like |Taf5 N-terminal domain-like |Taf5 N-terminal domain-like |TAF5 subunit of TFIID |Human (Homo sapiens) [TaxId: 9606]
d2p06a1 : (PHE4) (LYS84) [view usage] : a.204.1.3 |all-alpha NTP pyrophosphatases |all-alpha NTP pyrophosphatases |AF0060-like |Hypothetical protein AF0060 |Archaeoglobus fulgidus [TaxId: 2234]
d3u5er_ : (LEU4) (GLY48) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
d1sedb_ : (LYS70) (PHE112) [view usage] : a.219.1.1 |Hypothetical protein YhaI |Hypothetical protein YhaI |Hypothetical protein YhaI |Hypothetical protein YhaI |Bacillus subtilis [TaxId: 1423]
d3cdde2 : (THR97) (ARG164) [view usage] : b.106.1.1 |Phage tail proteins |Phage tail proteins |Baseplate protein-like |Baseplate protein gpP |Shewanella oneidensis [TaxId: 70863]
d3afha1 : (GLY98) (LYS123) [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d3gvma_ : (GLY0) (ILE95) [view usage] : a.25.3.0 |Ferritin-like |EsxAB dimer-like |automated matches |automated matches |Streptococcus agalactiae [TaxId: 208435]
d4jjfa2 : (MET307) (ARG342) [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Methanothermobacter marburgensis [TaxId: 79929]
d3ea0a_ : (GLU206) (LEU237) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Chlorobium tepidum [TaxId: 194439]
d1iona_ : (PRO201) (ALA237) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Cell division regulator MinD |Pyrococcus horikoshii [TaxId: 53953]
d1zeia_ : (ASN3) (CYS52) [view usage] : g.1.1.1 |Insulin-like |Insulin-like |Insulin-like |Insulin |Pig (Sus scrofa) [TaxId: 9823]
d4pu2a4 : (GLU637) (ASP690) [view usage] : a.118.1.27 |alpha-alpha superhelix |ARM repeat |Aminopeptidase N (APN) C-terminal-like |Aminopeptidase N (APN) C-terminal domain |Neisseria meningitidis [TaxId: 122586]
d1iqra1 : (GLU179) (SER210) [view usage] : a.99.1.1 |Cryptochrome/photolyase FAD-binding domain |Cryptochrome/photolyase FAD-binding domain |Cryptochrome/photolyase FAD-binding domain |C-terminal domain of DNA photolyase |Thermus thermophilus [TaxId: 274]
d4a64a_ : (SER305) (GLN361) [view usage] : a.118.17.0 |alpha-alpha superhelix |Cullin repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1s72p_ : (LEU3) (GLY47) [view usage] : a.94.1.1 |Ribosomal protein L19 (L19e) |Ribosomal protein L19 (L19e) |Ribosomal protein L19 (L19e) |Ribosomal protein L19 (L19e) |Haloarcula marismortui [TaxId: 2238]
d1mx1b_ : (GLU2471) (ARG2505) [view usage] : c.69.1.1 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetylcholinesterase-like |Mammalian carboxylesterase (liver carboxylesterase I) |Human (Homo sapiens) [TaxId: 9606]
d1sjua_ : (GLY8) (ASN47) [view usage] : g.1.1.1 |Insulin-like |Insulin-like |Insulin-like |Insulin |Human (Homo sapiens) [TaxId: 9606]
d3nd2a_ : (VAL442) (ALA487) [view usage] : a.118.1.1 |alpha-alpha superhelix |ARM repeat |Armadillo repeat |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3dafa2 : (MET305) (LYS341) [view usage] : a.100.1.11 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |HMD dimerization domain-like |5,10-methenyltetrahydromethanopterin hydrogenase, HMD |Methanocaldococcus jannaschii [TaxId: 2190]
d1xqra1 : (PRO304) (SER350) [view usage] : a.118.1.21 |alpha-alpha superhelix |ARM repeat |HspBP1 domain |Hsp70-binding protein 1 (HspBP1) |Human (Homo sapiens) [TaxId: 9606]
d2pv7b1 : (ALA245) (ASP302) [view usage] : a.100.1.12 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |TyrA dimerization domain-like |Prephenate dehydrogenase TyrA |Haemophilus influenzae [TaxId: 727]
d1w2bo_ : (LEU3) (GLY47) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Prokaryotic (50S subunit) |Haloarcula marismortui [TaxId: 2238]
d4r1sa_ : (SER123) (LYS175) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Petunia x [TaxId: 4102]
d2qvja_ : (ALA226) (LEU263) [view usage] : a.260.1.1 |Rhabdovirus nucleoprotein-like |Rhabdovirus nucleoprotein-like |Rhabdovirus nucleocapsid protein |Nucleoprotein |Vesicular stomatitis indiana virus [TaxId: 11277]
d1aowa_ : (ASP278) (GLY315) [view usage] : a.65.1.1 |Annexin |Annexin |Annexin |Annexin IV |Cow (Bos taurus) [TaxId: 9913]
d3dssb_ : (ILE252) (GLY302) [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Rab geranylgeranyltransferase, beta subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2yhxa_ : (UNK281) (GLY344) [view usage] : i.12.1.1 |Proteins of incorrect, partial and unknown sequence |Proteins of incorrect, partial and unknown sequence |Proteins of incorrect, partial and unknown sequence |Hexokinase |Baker's yeast (Saccharomyces cerevisiae), BIII [TaxId: 4932]
d2afig_ : (VAL216) (ASP249) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Nitrogenase iron protein |Azotobacter vinelandii [TaxId: 354]
d1hkba2 : (TYR301) (GLY360) [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Mammalian type I hexokinase |Human (Homo sapiens) [TaxId: 9606]
d1myoa_ : (ALA59) (GLY91) [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |Myotrophin |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1myoa_ : (ASP93) (GLN118) [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |Myotrophin |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3pcoa_ : (ASP135) (GLN181) [view usage] : d.104.1.0 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |automated matches |automated matches |Escherichia coli [TaxId: 562]
d3kpha_ : (ASN127) (GLY196) [view usage] : a.202.1.1 |Superantigen MAM |Superantigen MAM |Superantigen MAM |automated matches |Mycoplasma arthritidis [TaxId: 2111]
d3ld6b_ : (LEU411) (VAL440) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2yazb_ : (GLY11) (THR94) [view usage] : a.204.1.0 |all-alpha NTP pyrophosphatases |all-alpha NTP pyrophosphatases |automated matches |automated matches |Leishmania major [TaxId: 5664]
d1jiia_ : (ARG125) (VAL144) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Tyrosyl-tRNA synthetase (TyrRS) |Staphylococcus aureus [TaxId: 1280]
d3gg3a_ : (ARG780) (GLY828) [view usage] : a.29.2.1 |Bromodomain-like |Bromodomain |Bromodomain |P300/CAF histone acetyltransferase bromodomain |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.69, a.104, c.2, i.1, a.118, c.26, a.102, a.65, c.37, d.104, c.55, d.211, a.25, a.100, a.39, i.12, c.30, a.29, a.40, a.99,
a.204, a.94, a.2, d.379, b.106, a.260, a.219, a.202, g.1