Tableau information
Concept source: d1y74a1 amino acid (a.a.) range (GLY18)(THR73)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY18) (GLY37) H1
(PRO41) (LEU51) H2
(SER53) (THR73) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -150.5° H2
H3 155.6° -47.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1n81a_ : (SER32) (TYR84) [view usage] : a.185.1.1 |Gametocyte protein Pfg27 |Gametocyte protein Pfg27 |Gametocyte protein Pfg27 |Gametocyte protein Pfg27 |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d3gzga_ : (VAL123) (LEU146) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Xanthomonas axonopodis [TaxId: 92829]
d1zcwa_ : (GLY131) (GLY156) [view usage] : d.313.1.1 |Antiparallel beta/alpha barrel (PT-barrel) |Prenyltransferase-like |Prenyltransferase-like |Aromatic prenyltransferase |Streptomyces sp. CL190 [TaxId: 93372]
d1rofa_ : (GLY14) (ALA47) [view usage] : d.58.1.4 |Ferredoxin-like |4Fe-4S ferredoxins |Single 4Fe-4S cluster ferredoxin |Ferredoxin A |Thermotoga maritima [TaxId: 2336]
d1khoa1 : (GLY9) (SER52) [view usage] : a.124.1.1 |Phospholipase C/P1 nuclease |Phospholipase C/P1 nuclease |Phospholipase C |Alpha-toxin, N-terminal domain |Clostridium perfringens, different strains [TaxId: 1502]
d1v0da_ : (ASN154) (VAL203) [view usage] : d.4.1.7 |His-Me finger endonucleases |His-Me finger endonucleases |Caspase-activated DNase, CAD (DffB, DFF40) |Caspase-activated DNase, CAD (DffB, DFF40) |Mouse (Mus musculus) [TaxId: 10090]
d2i9ca1 : (THR10) (THR81) [view usage] : a.118.1.25 |alpha-alpha superhelix |ARM repeat |RPA1889-like |Hypothetical protein RPA1889 |Rhodopseudomonas palustris [TaxId: 1076]
d2b2tc1 : (THR76) (LYS97) [view usage] : b.34.13.2 |SH3-like barrel |Chromo domain-like |Chromo domain |ATP-dependent helicase CHD1 (Chromo domain protein 1) |Human (Homo sapiens) [TaxId: 9606]
d1rsoa_ : (LYS8) (GLN56) [view usage] : a.194.1.1 |L27 domain |L27 domain |L27 domain |Presynaptic protein sap97 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1jowa2 : (LEU151) (ALA176) [view usage] : a.74.1.1 |Cyclin-like |Cyclin-like |Cyclin |Viral cyclin |Herpesvirus saimiri [TaxId: 10381]
d1xhxa2 : (GLY358) (SER395) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |phi29 DNA polymerase |Bacteriophage phi-29 [TaxId: 10756]
d1y74b_ : (VAL84) (VAL129) [view usage] : a.194.1.1 |L27 domain |L27 domain |L27 domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1ca1a1 : (GLY9) (THR53) [view usage] : a.124.1.1 |Phospholipase C/P1 nuclease |Phospholipase C/P1 nuclease |Phospholipase C |Alpha-toxin, N-terminal domain |Clostridium perfringens, different strains [TaxId: 1502]
d3g28a_ : (VAL165) (GLN195) [view usage] : a.28.3.1 |Acyl carrier protein-like |Retrovirus capsid dimerization domain-like |Retrovirus capsid protein C-terminal domain |automated matches |Rous sarcoma virus [TaxId: 11888]
d1ojhi_ : (SER8) (GLN55) [view usage] : a.214.1.1 |NblA-like |NblA-like |NblA-like |Phycobilisome degradation protein NblA |Nostoc sp. PCC 7120 [TaxId: 103690]
d1y74a1 : (GLY18) (THR73) [view usage] : a.194.1.1 |L27 domain |L27 domain |L27 domain |Lin-7 |Mouse (Mus musculus) [TaxId: 10090]
d3lupa_ : (ASN165) (ILE186) [view usage] : c.119.1.0 |DAK1/DegV-like |DAK1/DegV-like |automated matches |automated matches |Streptococcus agalactiae [TaxId: 208435]
d4ee8a_ : (VAL130) (GLY154) [view usage] : d.313.1.0 |Antiparallel beta/alpha barrel (PT-barrel) |Prenyltransferase-like |automated matches |automated matches |Streptomyces cinnamonensis [TaxId: 1900]
d1w1ua_ : (ASP269) (PRO292) [view usage] : e.51.1.1 |Urocanase |Urocanase |Urocanase |Urocanate hydratase HutU |Pseudomonas putida [TaxId: 303]
d1rp8a2 : (PHE248) (TRP279) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Plant alpha-amylase |Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]
d1jkwa2 : (TYR164) (THR201) [view usage] : a.74.1.1 |Cyclin-like |Cyclin-like |Cyclin |Cyclin H (mcs2) |Human (Homo sapiens) [TaxId: 9606]
d2h5yb_ : (VAL123) (LEU146) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Xanthomonas axonopodis [TaxId: 190486]
d1nlxa_ : (VAL461) (GLY500) [view usage] : a.24.17.1 |Four-helical up-and-down bundle |Group V grass pollen allergen |Group V grass pollen allergen |Pollen allergen Phl P 6 |Timothy grass (Phleum pratense) [TaxId: 15957]
d2pf4c_ : (VAL15) (LEU42) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Mouse (Mus musculus) [TaxId: 10090]
d1kzga1 : (GLU625) (PHE683) [view usage] : a.87.1.1 |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |Dbl's big sister, Dbs |Mouse (Mus musculus) [TaxId: 10090]
d1dj8a_ : (CYS18) (ASN40) [view usage] : a.57.1.1 |Protein HNS-dependent expression A; HdeA |Protein HNS-dependent expression A; HdeA |Protein HNS-dependent expression A; HdeA |Protein HNS-dependent expression A; HdeA |Escherichia coli [TaxId: 562]
d1tr4a_ : (THR174) (GLU225) [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |26S proteasome non-ATPase regulatory subunit 10, gankyrin |Human (Homo sapiens) [TaxId: 9606]
d2bt2b_ : (ARG113) (ALA147) [view usage] : a.91.1.0 |Regulator of G-protein signaling, RGS |Regulator of G-protein signaling, RGS |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1go4a_ : (THR12) (CYS79) [view usage] : d.135.1.1 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |Human (Homo sapiens) [TaxId: 9606]
d1jmko_ : (THR121) (ASN161) [view usage] : c.69.1.22 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Thioesterase domain of polypeptide, polyketide and fatty acid synthases |Surfactin synthetase, SrfA |Bacillus subtilis [TaxId: 1423]
d1ezvc2 : (LYS319) (ARG382) [view usage] : f.32.1.1 |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Mitochondrial cytochrome b subunit, C-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3voja_ : (VAL216) (GLU233) [view usage] : c.6.1.0 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |automated matches |automated matches |Inky cap fungus (Coprinopsis cinerea) [TaxId: 5346]
d1n4ca_ : (PRO131) (GLN178) [view usage] : a.2.3.1 |Long alpha-hairpin |Chaperone J-domain |Chaperone J-domain |Auxilin J-domain |Cow (Bos taurus) [TaxId: 9913]
d1b3ua_ : (LEU9) (LEU41) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Human (Homo sapiens) [TaxId: 9606]
d2ie3a_ : (ASP218) (VAL244) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Human (Homo sapiens) [TaxId: 9606]
d1olpa1 : (GLY9) (SER52) [view usage] : a.124.1.1 |Phospholipase C/P1 nuclease |Phospholipase C/P1 nuclease |Phospholipase C |Alpha-toxin, N-terminal domain |Clostridium absonum [TaxId: 29369]
d1qm6a1 : (GLY9) (SER52) [view usage] : a.124.1.1 |Phospholipase C/P1 nuclease |Phospholipase C/P1 nuclease |Phospholipase C |Alpha-toxin, N-terminal domain |Clostridium perfringens, different strains [TaxId: 1502]
d1fcba2 : (ASP48) (CYS94) [view usage] : d.120.1.1 |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5 |Flavocytochrome b2, N-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1t5oa_ : (ASN31) (ARG63) [view usage] : c.124.1.5 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |IF2B-like |Putative eIF-2B delta-subunit |Archaeoglobus fulgidus [TaxId: 2234]
d4i5ra_ : (VAL228) (ASN255) [view usage] : c.6.1.1 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |Glycosyl hydrolases family 6, cellulases |automated matches |Fungus (Humicola insolens) [TaxId: 34413]
d3g26a_ : (SER163) (GLN195) [view usage] : a.28.3.1 |Acyl carrier protein-like |Retrovirus capsid dimerization domain-like |Retrovirus capsid protein C-terminal domain |automated matches |Rous sarcoma virus [TaxId: 11888]
d1piya_ : (MET224) (ARG292) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Escherichia coli [TaxId: 562]
d1kwna_ : (ASP147) (CYS177) [view usage] : b.25.1.1 |Osmotin, thaumatin-like protein |Osmotin, thaumatin-like protein |Osmotin, thaumatin-like protein |Thaumatin |Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]
d3no6a_ : (PRO108) (ASP151) [view usage] : a.132.1.0 |Heme oxygenase-like |Heme oxygenase-like |automated matches |automated matches |Staphylococcus epidermidis [TaxId: 176280]
d1zl8a1 : (ASN4) (TYR53) [view usage] : a.194.1.1 |L27 domain |L27 domain |L27 domain |Lin-7 |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d2pf4b_ : (ASP218) (VAL244) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Mouse (Mus musculus) [TaxId: 10090]
d1bccc2 : (PRO320) (ASN379) [view usage] : f.32.1.1 |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Mitochondrial cytochrome b subunit, C-terminal domain |Chicken (Gallus gallus) [TaxId: 9031]
d2f2ea1 : (THR5) (GLY22) [view usage] : a.4.5.69 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |HxlR-like |Hypothetical protein PA1607 |Pseudomonas aeruginosa [TaxId: 287]
d2h5ya_ : (VAL123) (LEU146) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Xanthomonas axonopodis [TaxId: 190486]
d1be3c2 : (PRO319) (LYS378) [view usage] : f.32.1.1 |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Mitochondrial cytochrome b subunit, C-terminal domain |Cow (Bos taurus) [TaxId: 9913]
d4dc5a_ : (ASP147) (CYS177) [view usage] : b.25.1.1 |Osmotin, thaumatin-like protein |Osmotin, thaumatin-like protein |Osmotin, thaumatin-like protein |Thaumatin |Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.1, c.69, c.94, c.6, d.58, a.118, c.124, a.132, d.211, a.25, b.25, b.34, a.4, e.51, a.91, a.74, a.87, a.124, a.24,
d.4, d.120, c.119, a.28, a.2, a.185, a.57, d.313, a.194, f.32, d.135, a.214