Tableau information
Concept source: d2xwva_ amino acid (a.a.) range (ASN220)(GLY264)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN220) (LEU226) H1
(GLU228) (ASP255) H2
(LEU256) (GLY264) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 128.2° H2
H3 129.4° 53.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4r6ka_ : (PHE180) (GLN232) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Bacillus subtilis [TaxId: 224308]
d2ehob1 : (ASN100) (PRO142) [view usage] : a.278.1.1 |GINS helical bundle-like |GINS helical bundle-like |PSF1 N-terminal domain-like |DNA replication complex GINS protein PSF1 |Human (Homo sapiens) [TaxId: 9606]
d3j39r_ : (ASP116) (HIS203) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Drosophila melanogaster [TaxId: 7227]
d2e9xa1 : (PRO99) (MET140) [view usage] : a.278.1.1 |GINS helical bundle-like |GINS helical bundle-like |PSF1 N-terminal domain-like |DNA replication complex GINS protein PSF1 |Human (Homo sapiens) [TaxId: 9606]
d1vhxb_ : (MSE101) (LEU137) [view usage] : c.55.3.8 |Ribonuclease H-like motif |Ribonuclease H-like |Putative Holliday junction resolvase RuvX |Hypothetical protein YrrK (RuvX) |Bacillus subtilis [TaxId: 1423]
d2d27a1 : (SER5) (GLY47) [view usage] : d.52.10.1 |Alpha-lytic protease prodomain-like |EspE N-terminal domain-like |GSPII protein E N-terminal domain-like |Type II secretion ATPase XpsE |Xanthomonas campestris [TaxId: 339]
d1m56b1 : (SER163) (ALA193) [view usage] : b.6.1.2 |Cupredoxin-like |Cupredoxins |Periplasmic domain of cytochrome c oxidase subunit II |Cytochrome c oxidase |Rhodobacter sphaeroides [TaxId: 1063]
d3zbyb_ : (LEU204) (LEU242) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d3d8ca_ : (HIS313) (ASN349) [view usage] : b.82.2.6 |Double-stranded beta-helix |Clavaminate synthase-like |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Human (Homo sapiens) [TaxId: 9606]
d3c02a_ : (ILE182) (ALA249) [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Plasmodium falciparum
d1fjgb_ : (GLU126) (LYS156) [view usage] : c.23.15.1 |Flavodoxin-like |Ribosomal protein S2 |Ribosomal protein S2 |Ribosomal protein S2 |Thermus thermophilus [TaxId: 274]
d1xfha_ : (ALA364) (LYS414) [view usage] : f.49.1.1 |Proton glutamate symport protein |Proton glutamate symport protein |Proton glutamate symport protein |Proton glutamate symport protein |Pyrococcus horikoshii [TaxId: 53953]
d2e8aa2 : (GLY230) (THR278) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1g59a2 : (LEU253) (GLN291) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Glutamyl-tRNA synthetase (GluRS) |Thermus thermophilus [TaxId: 274]
d4gr6a_ : (ASP57) (MET113) [view usage] : a.280.1.0 |RbcX-like |RbcX-like |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1dtza2 : (PRO473) (CYS505) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Camel (Camelus dromedarius) [TaxId: 9838]
d2bw3b1 : (GLY114) (GLU157) [view usage] : a.270.1.1 |Hermes dimerisation domain |Hermes dimerisation domain |Hermes dimerisation domain |Transposase Hermes, dimerisation domain |House fly (Musca domestica) [TaxId: 7370]
d4fyra4 : (GLU912) (LYS967) [view usage] : a.118.1.0 |alpha-alpha superhelix |ARM repeat |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2yc0a_ : (HIS313) (ASN349) [view usage] : b.82.2.6 |Double-stranded beta-helix |Clavaminate synthase-like |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Human (Homo sapiens) [TaxId: 9606]
d1q5ea_ : (ALA150) (VAL188) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450epok |Sorangium cellulosum [TaxId: 56]
d2cfoa1 : (ILE258) (LYS297) [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Synechococcus elongatus [TaxId: 32046]
d4j2aa2 : (MET752) (ASN775) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d2pend_ : (MET60) (GLU107) [view usage] : a.280.1.1 |RbcX-like |RbcX-like |RbcX-like |RuBisCo chaperone RbcX |Synechococcus sp. pcc 7002 [TaxId: 32049]
d4evia2 : (MET134) (GLU167) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Linum nodiflorum [TaxId: 407264]
d2fonb3 : (GLY569) (ALA606) [view usage] : a.29.3.0 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |automated matches |automated matches |Solanum lycopersicum [TaxId: 4081]
d2gpba_ : (VAL21) (GLU76) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d2nwwa1 : (ALA360) (THR415) [view usage] : f.49.1.1 |Proton glutamate symport protein |Proton glutamate symport protein |Proton glutamate symport protein |Proton glutamate symport protein |Pyrococcus horikoshii [TaxId: 53953]
d2bjfa_ : (PRO225) (ARG267) [view usage] : d.153.1.0 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |automated matches |automated matches |Clostridium perfringens [TaxId: 1502]
d3iima_ : (VAL34) (GLY72) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3tnka_ : (ARG71) (THR113) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Streptomyces coelicolor [TaxId: 100226]
d1q18a2 : (SER167) (ASP225) [view usage] : c.55.1.7 |Ribonuclease H-like motif |Actin-like ATPase domain |Glucokinase |Glucokinase Glk |Escherichia coli [TaxId: 562]
d3afha1 : (GLU265) (PHE303) [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d3tzoa_ : (ARG71) (THR113) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Streptomyces coelicolor [TaxId: 1902]
d1nr1a1 : (GLU449) (THR505) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Glutamate dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
d3r6qf_ : (SER434) (HIS461) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |L-aspartate ammonia lyase |Bacillus sp., ym55-1 [TaxId: 1409]
d1j09a2 : (LEU253) (GLN291) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Glutamyl-tRNA synthetase (GluRS) |Thermus thermophilus [TaxId: 274]
d2gtqa4 : (SER616) (GLN661) [view usage] : a.118.1.27 |alpha-alpha superhelix |ARM repeat |Aminopeptidase N (APN) C-terminal-like |Aminopeptidase N (APN) C-terminal domain |Neisseria meningitidis [TaxId: 122586]
d3iija_ : (VAL34) (GLY72) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2cb0b_ : (HIS137) (ASP184) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Pyrococcus furiosus [TaxId: 2261]
d2xuma_ : (HIS313) (ASN349) [view usage] : b.82.2.6 |Double-stranded beta-helix |Clavaminate synthase-like |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Human (Homo sapiens) [TaxId: 9606]
d2izza2 : (ILE167) (LEU218) [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3r6vd_ : (SER434) (HIS461) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |L-aspartate ammonia lyase |Bacillus sp., ym55-1 [TaxId: 1409]
d3p9ca2 : (LEU140) (ASP166) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Lolium perenne [TaxId: 4522]
d2pejf1 : (GLU52) (THR110) [view usage] : a.280.1.1 |RbcX-like |RbcX-like |RbcX-like |RuBisCo chaperone RbcX |Synechococcus sp. pcc 7002 [TaxId: 32049]
d4pyka_ : (THR54) (HIS107) [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |Catechol O-methyltransferase, COMT |Human (Homo sapiens) [TaxId: 9606]
d2ehof_ : (ASN100) (MSE140) [view usage] : a.278.1.1 |GINS helical bundle-like |GINS helical bundle-like |PSF1 N-terminal domain-like |DNA replication complex GINS protein PSF1 |Human (Homo sapiens) [TaxId: 9606]
d1s7za_ : (ASP67) (GLU107) [view usage] : a.159.3.1 |Another 3-helical bundle |B-form DNA mimic Ocr |B-form DNA mimic Ocr |B-form DNA mimic Ocr |Bacteriophage T7 [TaxId: 10760]
d2cb0a_ : (HIS137) (GLU183) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Pyrococcus furiosus [TaxId: 2261]
d1gvnb_ : (PRO147) (GLY196) [view usage] : c.37.1.21 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Plasmid maintenance system epsilon/zeta, toxin zeta subunit |Plasmid maintenance system epsilon/zeta, toxin zeta subunit |Streptococcus pyogenes [TaxId: 1314]
d2q9qc_ : (ASN100) (MET140) [view usage] : a.278.1.1 |GINS helical bundle-like |GINS helical bundle-like |PSF1 N-terminal domain-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2prob1 : (ASP5) (PHE44) [view usage] : d.52.1.1 |Alpha-lytic protease prodomain-like |Alpha-lytic protease prodomain |Alpha-lytic protease prodomain |Alpha-lytic protease prodomain |Lysobacter enzymogenes [TaxId: 69]
d4hr3a1 : (SER83) (GLY121) [view usage] : e.6.1.0 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
d2w0xa_ : (HIS313) (ASN349) [view usage] : b.82.2.6 |Double-stranded beta-helix |Clavaminate synthase-like |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Human (Homo sapiens) [TaxId: 9606]
d3jv1a_ : (ASP174) (SER227) [view usage] : d.25.1.0 |Mitochondrial glycoprotein MAM33-like |Mitochondrial glycoprotein MAM33-like |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d1l1fa1 : (GLU449) (THR505) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Glutamate dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
d2cxfa1 : (LYS204) (ILE236) [view usage] : a.256.1.1 |RUN domain-like |RUN domain-like |RUN domain |Rap2 interacting protein X (RUFY3) |Mouse (Mus musculus) [TaxId: 10090]
d2fona3 : (GLY569) (ALA606) [view usage] : a.29.3.0 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |automated matches |automated matches |Solanum lycopersicum [TaxId: 4081]
d2c7bb_ : (THR192) (ASP227) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Uncultured archaeon [TaxId: 115547]
d2deca_ : (HIS137) (SER184) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d3c9fa2 : (ASN302) (LYS336) [view usage] : d.159.1.2 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain |5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain |Yeast (Candida albicans) [TaxId: 5476]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, b.82, c.69, c.94, a.104, c.2, d.159, i.1, a.118, c.26, c.66, c.80, a.127, c.23, c.37, c.55, e.6, d.153, c.87, b.6,
a.100, a.29, f.19, a.278, d.52, d.25, a.280, f.49, a.159, a.256, a.270