Tableau information
Concept source: d3v93b_ amino acid (a.a.) range (SER565)(GLY611)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER565) (PHE576) H1
(VAL578) (LEU588) H2
(GLU594) (GLY611) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -38.9° H2
H3 -144.7° -157.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1rc9a2 : (PHE189) (ASN209) [view usage] : g.19.1.2 |Crisp domain-like |Crisp domain-like |Crisp domain |Cysteine-rich secretory protein (SteCRISP) |Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]
d1ayxa_ : (SER423) (ALA492) [view usage] : a.102.1.1 |alpha/alpha toroid |Six-hairpin glycosidases |Glucoamylase |Glucoamylase |Yeast (Saccharomycopsis fibuligera) [TaxId: 4944]
d4nefa_ : (GLY175) (VAL222) [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3d7ca_ : (ARG790) (GLY833) [view usage] : a.29.2.1 |Bromodomain-like |Bromodomain |Bromodomain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4di0a_ : (THR78) (LEU138) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Burkholderia pseudomallei [TaxId: 320372]
d1nnqa1 : (THR69) (GLY131) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Rubrerythrin, N-terminal domain |Pyrococcus furiosus [TaxId: 2261]
d4nefc_ : (GLY175) (LEU223) [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1nxca_ : (ILE348) (LEU385) [view usage] : a.102.2.1 |alpha/alpha toroid |Seven-hairpin glycosidases |Class I alpha-1;2-mannosidase, catalytic domain |Class I alpha-1;2-mannosidase, catalytic domain |Mouse (Mus musculus) [TaxId: 10090]
d2awia2 : (GLU74) (ARG103) [view usage] : a.118.8.4 |alpha-alpha superhelix |TPR-like |PrgX C-terminal domain-like |PrgX |Enterococcus faecalis [TaxId: 1351]
d1q9mc_ : (SER364) (ILE410) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |Catalytic domain of cyclic nucleotide phosphodiesterase pde4d |Human (Homo sapiens) [TaxId: 9606]
d3gd8a_ : (ALA204) (VAL251) [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4kxra_ : (GLU9) (ALA90) [view usage] : a.25.4.1 |Ferritin-like |PE/PPE dimer-like |PE |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d4w4la_ : (GLU9) (ALA90) [view usage] : a.25.4.1 |Ferritin-like |PE/PPE dimer-like |PE |automated matches |Mycobacterium tuberculosis [TaxId: 652616]
d2rfra1 : (ASP3) (LEU42) [view usage] : d.17.4.28 |Cystatin-like |NTF2-like |BaiE/LinA-like |Uncharacterized protein Saro3722 |Novosphingobium aromaticivorans [TaxId: 48935]
d3bula1 : (CYS690) (SER739) [view usage] : a.46.1.1 |Methionine synthase domain-like |Methionine synthase domain |Methionine synthase domain |Methionine synthase domain |Escherichia coli [TaxId: 562]
d1hcua_ : (SER56) (ILE84) [view usage] : a.102.2.1 |alpha/alpha toroid |Seven-hairpin glycosidases |Class I alpha-1;2-mannosidase, catalytic domain |Class I alpha-1;2-mannosidase, catalytic domain |Trichoderma reesei [TaxId: 51453]
d3cm0a_ : (THR47) (GLU75) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Adenylate kinase |Thermus thermophilus [TaxId: 274]
d3awma_ : (ALA158) (ALA202) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Sphingomonas paucimobilis [TaxId: 13689]
d2pf4a_ : (GLY43) (GLY81) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Mouse (Mus musculus) [TaxId: 10090]
d1e2xa2 : (GLY79) (ARG118) [view usage] : a.78.1.1 |GntR ligand-binding domain-like |GntR ligand-binding domain-like |GntR ligand-binding domain-like |Fatty acid responsive transcription factor FadR, C-terminal domain |Escherichia coli [TaxId: 562]
d3eh8a1 : (ASP73) (GLY108) [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Emericella nidulans [TaxId: 162425]
d3awpa_ : (ALA158) (GLY203) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Sphingomonas paucimobilis [TaxId: 13689]
d1ac5a_ : (ASP216) (ALA258) [view usage] : c.69.1.5 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Serine carboxypeptidase-like |Serine carboxypeptidase II |Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
d1e0pa_ : (THR5) (GLY63) [view usage] : f.13.1.1 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |Bacteriorhodopsin-like |Bacteriorhodopsin |Halobacterium salinarum [TaxId: 2242]
d4di0b_ : (THR78) (GLY137) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Burkholderia pseudomallei [TaxId: 320372]
d3jwqd_ : (ARG810) (GLN859) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3b84a_ : (SER89) (SER113) [view usage] : d.42.1.0 |POZ domain |POZ domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ab5b1 : (ASN337) (ASP372) [view usage] : d.95.2.0 |Homing endonuclease-like |Homing endonucleases |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4i5na_ : (ASP552) (SER587) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Human (Homo sapiens) [TaxId: 9606]
d1hcuc_ : (SER56) (ILE84) [view usage] : a.102.2.1 |alpha/alpha toroid |Seven-hairpin glycosidases |Class I alpha-1;2-mannosidase, catalytic domain |Class I alpha-1;2-mannosidase, catalytic domain |Trichoderma reesei [TaxId: 51453]
d3bimb_ : (ARG98) (SER128) [view usage] : d.42.1.1 |POZ domain |POZ domain |BTB/POZ domain |B-cell lymphoma 6 (Bcl6) protein BTB domain |Human (Homo sapiens) [TaxId: 9606]
d2pf4c_ : (GLY43) (PHE76) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Mouse (Mus musculus) [TaxId: 10090]
d2pf4c_ : (ASN553) (SER587) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Mouse (Mus musculus) [TaxId: 10090]
d3d9sa_ : (GLY176) (PHE226) [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4jc6c_ : (THR213) (ARG265) [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Spinach (Spinacia oleracea) [TaxId: 3562]
d1g8ma1 : (ASP148) (GLU197) [view usage] : c.24.1.3 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Inosicase |IMP cyclohydrolase domain of bifunctional purine biosynthesis enzyme ATIC |Chicken (Gallus gallus) [TaxId: 9031]
d1j30b_ : (THR80) (LEU137) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Hypothetical rubrerythrin |Sulfolobus tokodaii [TaxId: 111955]
d2ihr1_ : (TRP34) (ASN103) [view usage] : e.38.1.0 |Release factor |Release factor |automated matches |automated matches |Thermus thermophilus [TaxId: 274]
d1wdza1 : (GLU106) (GLN228) [view usage] : a.238.1.3 |BAR/IMD domain-like |BAR/IMD domain-like |IMD domain |BAP2/IRSp53 N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1sjja_ : (ILE542) (GLU660) [view usage] : i.15.1.1 |Muscle protein complexes |Muscle protein complexes |Muscle protein complexes |Actinin |Chicken (Gallus gallus) [TaxId: 9031]
d4w4kc_ : (ASN7) (GLY83) [view usage] : a.25.4.1 |Ferritin-like |PE/PPE dimer-like |PE |automated matches |Mycobacterium tuberculosis [TaxId: 652616]
d1l8aa3 : (SER833) (ASN875) [view usage] : c.48.1.1 |TK C-terminal domain-like |TK C-terminal domain-like |Transketolase C-terminal domain-like |Pyruvate dehydrogenase E1 component, C-domain |Escherichia coli [TaxId: 562]
d1p8kz1 : (ASP73) (GLY108) [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |DNA endonuclease I-AniI |Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]
d1b3ua_ : (GLY42) (GLY80) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Human (Homo sapiens) [TaxId: 9606]
d2ie3a_ : (ALA296) (ASP336) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Human (Homo sapiens) [TaxId: 9606]
d2ie3a_ : (ASN553) (SER587) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Human (Homo sapiens) [TaxId: 9606]
d3clla_ : (THR213) (ARG265) [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Spinach (Spinacia oleracea) [TaxId: 3562]
d3cn5a_ : (THR213) (ARG265) [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Spinach (Spinacia oleracea) [TaxId: 3562]
d1rsrb_ : (PRO91) (ASN128) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Escherichia coli [TaxId: 562]
d2idga1 : (GLU114) (TYR160) [view usage] : a.184.1.1 |TorD-like |TorD-like |TorD-like |Hypothetical protein AF0160 |Archaeoglobus fulgidus [TaxId: 2234]
d1r2ba_ : (ARG98) (ALA127) [view usage] : d.42.1.1 |POZ domain |POZ domain |BTB/POZ domain |B-cell lymphoma 6 (Bcl6) protein BTB domain |Human (Homo sapiens) [TaxId: 9606]
d1ja1a1 : (THR383) (MET405) [view usage] : b.43.4.1 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |NADPH-cytochrome p450 reductase FAD-binding domain-like |NADPH-cytochrome p450 reductase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3vtja_ : (ALA158) (GLY203) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Sphingomonas paucimobilis [TaxId: 13689]
d1au1a_ : (GLN51) (ARG165) [view usage] : a.26.1.3 |4-helical cytokines |4-helical cytokines |Interferons/interleukin-10 (IL-10) |Interferon-beta |Human (Homo sapiens) [TaxId: 9606]
d1k75a_ : (SER396) (GLN433) [view usage] : c.82.1.2 |ALDH-like |ALDH-like |L-histidinol dehydrogenase HisD |L-histidinol dehydrogenase HisD |Escherichia coli [TaxId: 562]
d1vpqa_ : (GLY75) (ILE99) [view usage] : c.1.32.1 |TIM beta/alpha-barrel |TM1631-like |TM1631-like |Hypothetical protein TM1631 |Thermotoga maritima [TaxId: 2336]
d1t9sa_ : (ILE813) (ALA857) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |cGMP-specific 3',5'-cyclic phosphodiesterase pde5a1-Ibmx |Human (Homo sapiens) [TaxId: 9606]
d1qdba_ : (ALA466) (ASP506) [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |Cytochrome c nitrite reductase |Sulfurospirillum deleyianum [TaxId: 65553]
d1j30a_ : (THR80) (GLY143) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Hypothetical rubrerythrin |Sulfolobus tokodaii [TaxId: 111955]
d1c4xa_ : (PRO145) (VAL170) [view usage] : c.69.1.10 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carbon-carbon bond hydrolase |2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) |Rhodococcus sp., strain rha1 [TaxId: 1831]
d4d08b_ : (PRO856) (ILE904) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1r7ma2 : (ASP201) (LEU224) [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |DNA endonuclease I-SceI |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3qe2b2 : (THR386) (SER410) [view usage] : b.43.4.1 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |NADPH-cytochrome p450 reductase FAD-binding domain-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4jc6d_ : (THR213) (ARG265) [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Spinach (Spinacia oleracea) [TaxId: 3562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.69, a.104, a.118, c.82, a.102, a.211, c.37, i.15, a.25, d.17, c.24, f.13, c.48, a.138, b.43, a.29, f.19, d.95, d.42,
a.26, e.38, a.184, a.238, a.46, a.78, g.19