Tableau information
Concept source: d2ns1a_ amino acid (a.a.) range (GLY280)(ALA334)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY280) (ARG307) H1
(ASP313) (VAL317) H2
(GLY319) (ALA334) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 153.1° H2
H3 152.2° 2.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4bh2b_ : (GLU39) (LEU126) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |automated matches |Influenza virus [TaxId: 284218]
d3hila_ : (ALA940) (PHE964) [view usage] : a.60.1.0 |SAM domain-like |SAM/Pointed domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3kkaa_ : (ALA950) (PHE974) [view usage] : a.60.1.0 |SAM domain-like |SAM/Pointed domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2reqa1 : (HIS244) (VAL273) [view usage] : c.1.19.1 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Methylmalonyl-CoA mutase, N-terminal (CoA-binding) domain |Methylmalonyl-CoA mutase alpha subunit, domain 1 |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
d1vnea_ : (ALA479) (GLY567) [view usage] : a.111.1.3 |Acid phosphatase/Vanadium-dependent haloperoxidase |Acid phosphatase/Vanadium-dependent haloperoxidase |Chloroperoxidase |Chloroperoxidase |Curvularia inaequalis [TaxId: 38902]
d1ojhc_ : (SER8) (GLY57) [view usage] : a.214.1.1 |NblA-like |NblA-like |NblA-like |Phycobilisome degradation protein NblA |Nostoc sp. PCC 7120 [TaxId: 103690]
d2m03a_ : (TYR84) (GLU122) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3tuia_ : (GLY118) (LEU143) [view usage] : f.58.1.1 |MetI-like |MetI-like |MetI-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1pm2a_ : (LYS269) (VAL319) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Escherichia coli [TaxId: 562]
d3lzgd_ : (SER40) (LEU126) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |automated matches |Influenza A virus [TaxId: 641501]
d2goka2 : (ALA96) (LEU128) [view usage] : c.1.9.17 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Imidazolonepropionase-like |Imidazolonepropionase |Agrobacterium tumefaciens [TaxId: 358]
d3gaga_ : (ASP89) (PRO123) [view usage] : d.90.1.0 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |automated matches |automated matches |Streptococcus mutans [TaxId: 1309]
d2bxba1 : (VAL344) (LYS378) [view usage] : a.126.1.1 |Serum albumin-like |Serum albumin-like |Serum albumin-like |Serum albumin |Human (Homo sapiens) [TaxId: 9606]
d1jada_ : (GLN72) (VAL242) [view usage] : h.4.10.1 |Antiparallel coiled-coil |C-terminal domain of PLC-beta |C-terminal domain of PLC-beta |C-terminal domain of PLC-beta |Turkey (Meleagris gallopavo) [TaxId: 9103]
d1uptd_ : (THR2191) (ARG2219) [view usage] : a.193.1.1 |GRIP domain |GRIP domain |GRIP domain |Golgi autoantigen, golgin-245 |Human (Homo sapiens) [TaxId: 9606]
d3hada1 : (ASN208) (GLY241) [view usage] : a.100.1.3 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |HCDH C-domain-like |Short chain L-3-hydroxyacyl CoA dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
d1ysya1 : (LEU19) (LEU42) [view usage] : a.8.9.1 |immunoglobulin/albumin-binding domain-like |Coronavirus NSP7-like |Coronavirus NSP7-like |Nonstructural protein 7, NSP7 |SARS coronavirus [TaxId: 227859]
d1mhsa_ : (MET758) (THR812) [view usage] : i.18.1.1 |Membrane ion ATPase |Membrane ion ATPase |Membrane ion ATPase |Proton ATPase |Fungus (Neurospora crassa) [TaxId: 5141]
d1hjqa_ : (PRO260) (VAL287) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Beta-1,4-galactanase |Fungus (Humicola insolens) [TaxId: 34413]
d4loha_ : (PRO264) (ALA302) [view usage] : d.387.1.1 |STING C-terminal-like |STING, TM173 CTD-like |Tyrosinase cofactor MelC1 |Tyrosinase cofactor MelC1 |Human (Homo sapiens) [TaxId: 9606]
d1kpla_ : (THR31) (ALA101) [view usage] : f.20.1.1 |Clc chloride channel |Clc chloride channel |Clc chloride channel |Clc chloride channel |Salmonella typhimurium [TaxId: 90371]
d3reta_ : (PRO51) (THR97) [view usage] : a.130.1.1 |Chorismate mutase II |Chorismate mutase II |Dimeric chorismate mutase |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d1idqa_ : (SER478) (GLY567) [view usage] : a.111.1.3 |Acid phosphatase/Vanadium-dependent haloperoxidase |Acid phosphatase/Vanadium-dependent haloperoxidase |Chloroperoxidase |Chloroperoxidase |Curvularia inaequalis [TaxId: 38902]
d1vnga_ : (ALA479) (GLY567) [view usage] : a.111.1.3 |Acid phosphatase/Vanadium-dependent haloperoxidase |Acid phosphatase/Vanadium-dependent haloperoxidase |Chloroperoxidase |Chloroperoxidase |Curvularia inaequalis [TaxId: 38902]
d1npca_ : (THR281) (GLY315) [view usage] : d.92.1.2 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Thermolysin-like |Neutral protease |Bacillus cereus, strain dsm 3101 [TaxId: 1396]
d1g3ua_ : (VAL97) (GLY129) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Thymidylate kinase |Mycobacterium tuberculosis [TaxId: 1773]
d1ntca_ : (TRP402) (ARG439) [view usage] : a.4.1.12 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |FIS-like |DNA-binding domain of NTRC |Salmonella typhimurium [TaxId: 90371]
d2ig3b_ : (PHE82) (LYS123) [view usage] : a.1.1.0 |Globin-like |Globin-like |automated matches |automated matches |Campylobacter jejuni [TaxId: 197]
d3hgxa_ : (ALA11) (MET57) [view usage] : a.130.1.1 |Chorismate mutase II |Chorismate mutase II |Dimeric chorismate mutase |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d3hilb_ : (ALA940) (PHE964) [view usage] : a.60.1.0 |SAM domain-like |SAM/Pointed domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1mbsa_ : (LYS102) (PHE151) [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Common seal (Phoca vitulina) [TaxId: 9720]
d2ht3b1 : (LEU33) (LYS99) [view usage] : f.20.1.1 |Clc chloride channel |Clc chloride channel |Clc chloride channel |Clc chloride channel |Escherichia coli [TaxId: 562]
d4fo8c_ : (GLU119) (GLY160) [view usage] : d.127.1.1 |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Creatinase/aminopeptidase |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d4dj6f_ : (SER40) (ARG127) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |automated matches |Influenza a virus (a/netherlands/219/2003(h7n7)) [TaxId: 680693]
d2k1da_ : (ARG164) (GLY195) [view usage] : d.6.1.1 |Prion-like |Prion-like |Prion-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1l1fa2 : (ASN12) (LYS57) [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Glutamate dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
d2oofa2 : (ARG81) (ALA114) [view usage] : c.1.9.17 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Imidazolonepropionase-like |Probable 4-imidazolone-5-propanoate amidohydrolase GOS_1928421 |Environmental samples
d2uund_ : (ASP3) (ALA34) [view usage] : a.1.1.3 |Globin-like |Globin-like |Phycocyanin-like phycobilisome proteins |automated matches |Leptolyngbya sp. [TaxId: 47254]
d4hr3a1 : (SER6) (GLY67) [view usage] : e.6.1.0 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
d4fqib_ : (SER54) (LEU126) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
d1vnfa_ : (ALA479) (GLY567) [view usage] : a.111.1.3 |Acid phosphatase/Vanadium-dependent haloperoxidase |Acid phosphatase/Vanadium-dependent haloperoxidase |Chloroperoxidase |Chloroperoxidase |Curvularia inaequalis [TaxId: 38902]
d2ht3a1 : (LEU33) (ALA101) [view usage] : f.20.1.1 |Clc chloride channel |Clc chloride channel |Clc chloride channel |Clc chloride channel |Escherichia coli [TaxId: 562]
d2nuua_ : (LEU198) (GLY254) [view usage] : f.44.1.0 |Ammonium transporter |Ammonium transporter |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1z82b2 : (ASP168) (GLY218) [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d1x6ia_ : (LYS6) (HIS30) [view usage] : a.218.1.0 |YgfY-like |YgfY-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, d.92, f.20, c.37, e.6, d.127, a.126, a.25, a.1, a.100, a.4, d.90, h.3, c.58, f.1, a.111, h.4, d.6, a.60, a.8,
a.130, f.58, f.44, a.218, d.387, i.18, a.193, a.214