Tableau information
Concept source: d3vbae_ amino acid (a.a.) range (ASP17)(VAL39)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP17) (LEU22) H1
(ALA24) (TYR29) H2
(LYS31) (VAL39) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 54.5° H2
H3 106.0° 157.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2pg6b_ : (GLU122) (VAL186) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1l3pa_ : (PRO151) (GLY197) [view usage] : a.24.17.1 |Four-helical up-and-down bundle |Group V grass pollen allergen |Group V grass pollen allergen |Functional domain of pollen allergen Phl P 5b |Timothy grass (Phleum pratense) [TaxId: 15957]
d2xbka_ : (GLU92) (VAL157) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces natalensis [TaxId: 68242]
d1okca_ : (ASN73) (CYS128) [view usage] : f.42.1.1 |Mitochondrial carrier |Mitochondrial carrier |Mitochondrial carrier |ADP,ATP carrier protein |Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
d2naca1 : (ILE148) (VAL183) [view usage] : c.2.1.4 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Formate/glycerate dehydrogenases, NAD-domain |Formate dehydrogenase |Pseudomonas sp., strain 101 [TaxId: 306]
d2xfha_ : (PRO92) (GLY153) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Saccharopolyspora erythraea [TaxId: 1836]
d3kw4a_ : (GLY118) (GLY185) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Mammalian cytochrome p450 2b4 |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d2d62a1 : (THR100) (LEU130) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |automated matches |Pyrococcus horikoshii [TaxId: 53953]
d2kaxa_ : (THR3) (CYS43) [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1j78a3 : (GLY387) (PRO415) [view usage] : a.126.1.1 |Serum albumin-like |Serum albumin-like |Serum albumin-like |Vitamin D binding protein |Human (Homo sapiens) [TaxId: 9606]
d2awnb2 : (SER91) (LEU121) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Maltose transport protein MalK, N-terminal domain |Escherichia coli [TaxId: 562]
d4f7fa_ : (PRO75) (ASN113) [view usage] : a.39.2.0 |EF Hand-like |Insect pheromone/odorant-binding proteins |automated matches |automated matches |African malaria mosquito (Anopheles gambiae) [TaxId: 7165]
d3vbae_ : (ASP17) (VAL39) [view usage] : c.8.2.0 |The "swivelling" beta/beta/alpha domain |LeuD/IlvD-like |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 243232]
d1l9ya_ : (HIS263) (GLY311) [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Fluoribacter gormanii, (Legionella gormanii) FEZ-1 [TaxId: 464]
d4ne4a_ : (ASN240) (GLY283) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Agrobacterium fabrum [TaxId: 176299]
d3tnka_ : (THR113) (GLY162) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Streptomyces coelicolor [TaxId: 100226]
d4lw4c_ : (PRO10) (LYS42) [view usage] : d.224.1.1 |SufE/NifU |SufE/NifU |SufE-like |automated matches |Escherichia coli [TaxId: 714962]
d1suoa_ : (GLY118) (VAL183) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Mammalian cytochrome p450 2b4 |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d3o6oa_ : (ASN91) (GLY120) [view usage] : d.122.1.1 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |Heat shock protein 90, HSP90, N-terminal domain |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d2xd2a_ : (ILE377) (LYS419) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
d1v7la_ : (SER15) (ILE36) [view usage] : c.8.2.1 |The "swivelling" beta/beta/alpha domain |LeuD/IlvD-like |LeuD-like |Isopropylmalate isomerase LeuD |Pyrococcus horikoshii [TaxId: 53953]
d1of9a_ : (THR47) (HIS75) [view usage] : a.64.1.4 |Saposin-like |Saposin |Ameobapore A |Ameobapore A |Entamoeba (Entamoeba histolytica) [TaxId: 5759]
d3v2la_ : (PRO75) (ASN113) [view usage] : a.39.2.0 |EF Hand-like |Insect pheromone/odorant-binding proteins |automated matches |automated matches |African malaria mosquito (Anopheles gambiae) [TaxId: 7165]
d3tzoa_ : (THR113) (GLY162) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Streptomyces coelicolor [TaxId: 1902]
d3bsba_ : (THR874) (ASP895) [view usage] : a.118.1.8 |alpha-alpha superhelix |ARM repeat |Pumilio repeat |Pumilio 1 |Human (Homo sapiens) [TaxId: 9606]
d4nd9a_ : (ASN240) (GLY283) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Agrobacterium fabrum [TaxId: 176299]
d2z36b_ : (ALA101) (GLY165) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Nonomuraea recticatena [TaxId: 46178]
d3vbac_ : (ASP17) (VAL39) [view usage] : c.8.2.0 |The "swivelling" beta/beta/alpha domain |LeuD/IlvD-like |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 243232]
d2pkpa_ : (ASP15) (SER35) [view usage] : c.8.2.0 |The "swivelling" beta/beta/alpha domain |LeuD/IlvD-like |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 243232]
d3mjfa1 : (GLU73) (GLY103) [view usage] : c.30.1.0 |PreATP-grasp domain |PreATP-grasp domain |automated matches |automated matches |Yersinia pestis [TaxId: 214092]
d2onka1 : (SER86) (LYS113) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Molybdate/tungstate import ATP-binding protein WtpC (ModC) |Archaeoglobus fulgidus [TaxId: 2234]
d3lp8a1 : (GLU71) (SER101) [view usage] : c.30.1.0 |PreATP-grasp domain |PreATP-grasp domain |automated matches |automated matches |Ehrlichia chaffeensis [TaxId: 205920]
d2zbya_ : (PRO100) (LEU163) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces griseolus [TaxId: 1909]
d1g2912 : (THR97) (LEU127) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Maltose transport protein MalK, N-terminal domain |Thermococcus litoralis [TaxId: 2265]
d1pima_ : (ASP258) (GLY320) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Escherichia coli [TaxId: 562]
d1qx7a_ : (GLU82) (LEU116) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1t50a_ : (ASP5) (MET37) [view usage] : g.63.1.1 |Mollusk pheromone |Mollusk pheromone |Mollusk pheromone |Attractin |California sea hare (Aplysia californica) [TaxId: 6500]
d1f4ua_ : (PRO89) (ILE133) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cyp119 |Sulfolobus solfataricus [TaxId: 2287]
d1jt1a_ : (HIS263) (GLU309) [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Fluoribacter gormanii, (Legionella gormanii) FEZ-1 [TaxId: 464]
d2k5ga1 : (ARG139) (LEU183) [view usage] : d.129.3.5 |TBP-like |Bet v1-like |AHSA1 domain |Uncharacterized protein BPP1335 |Bordetella parapertussis [TaxId: 519]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94, a.104, c.2, a.118, d.157, d.129, d.122, c.37, a.126, a.25, c.8, a.39, c.30, a.24, d.224, a.64, f.42, g.63