Tableau information
Concept source: d4k4xa_ amino acid (a.a.) range (GLY426)(SER461)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY426) (SER439) H1
(VAL440) (LEU446) H2
(ALA450) (SER461) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -117.5° H2
H3 134.6° 51.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3h1ho1 : (PRO134) (ASN198) [view usage] : d.185.1.0 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d1fzia_ : (TYR383) (ASN412) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Methane monooxygenase hydrolase alpha subunit |Methylococcus capsulatus [TaxId: 414]
d4hz2a2 : (ILE156) (LEU204) [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Xanthobacter autotrophicus [TaxId: 78245]
d1o7ka_ : (PHE44) (ASP82) [view usage] : d.189.1.1 |PX domain |PX domain |PX domain |p47phox NADPH oxidase |Human (Homo sapiens) [TaxId: 9606]
d1ezvf_ : (PHE5) (ILE49) [view usage] : f.27.1.1 |14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1ezvf_ : (PRO54) (ASN122) [view usage] : f.27.1.1 |14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3vzqa_ : (THR188) (SER219) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Cupriavidus necator [TaxId: 381666]
d1yrec_ : (ILE30) (GLY66) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d1huxa_ : (GLY132) (GLY181) [view usage] : c.55.1.5 |Ribonuclease H-like motif |Actin-like ATPase domain |BadF/BadG/BcrA/BcrD-like |Hydroxyglutaryl-CoA dehydratase component A |Acidaminococcus fermentans [TaxId: 905]
d4oa5e_ : (GLU22) (GLY56) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Anaplasma phagocytophilum [TaxId: 212042]
d1m1qa_ : (ASP46) (LYS91) [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain |Shewanella oneidensis [TaxId: 70863]
d1tv2a_ : (ILE398) (LEU454) [view usage] : c.1.25.1 |TIM beta/alpha-barrel |Monomethylamine methyltransferase MtmB |Monomethylamine methyltransferase MtmB |Monomethylamine methyltransferase MtmB |Methanosarcina barkeri [TaxId: 2208]
d1l5ja1 : (LEU2) (GLU43) [view usage] : a.118.15.1 |alpha-alpha superhelix |Aconitase B, N-terminal domain |Aconitase B, N-terminal domain |Aconitase B, N-terminal domain |Escherichia coli [TaxId: 562]
d1v1ba_ : (PRO266) (LEU300) [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |2-keto-3-deoxygluconate kinase |Thermus thermophilus [TaxId: 274]
d3n38a_ : (ASP248) (SER287) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1r2fa_ : (ASN248) (SER287) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Salmonella typhimurium [TaxId: 90371]
d3iacc_ : (SER81) (ALA125) [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Salmonella typhimurium [TaxId: 90371]
d1w6va1 : (ARG36) (TYR89) [view usage] : d.324.1.1 |DUSP-like |DUSP-like |DUSP, domain in ubiquitin-specific proteases |Ubiquitin carboxyl-terminal hydrolase 15 |Human (Homo sapiens) [TaxId: 9606]
d2d8na_ : (LYS119) (GLY160) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1s7nc_ : (VAL21) (GLY65) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Salmonella typhimurium [TaxId: 99287]
d3iaca_ : (SER81) (ALA125) [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Salmonella typhimurium [TaxId: 90371]
d1we9a_ : (HIS33) (LYS58) [view usage] : g.50.1.2 |FYVE/PHD zinc finger |FYVE/PHD zinc finger |PHD domain |PHD finger protein At5g26210 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1j5sb_ : (VAL88) (ALA120) [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uronate isomerase TM0064 |Thermotoga maritima [TaxId: 2336]
d3ddua2 : (MET583) (TYR614) [view usage] : c.69.1.4 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Prolyl oligopeptidase, C-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1nslc_ : (GLU16) (ARG51) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Probable acetyltransferase YdaF |Bacillus subtilis [TaxId: 1423]
d1mn3a_ : (SER398) (LEU449) [view usage] : a.5.2.4 |RuvA C-terminal domain-like |UBA-like |CUE domain |Vacuolar protein sorting-associated protein vps9 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3ebsb_ : (ASP266) (HIS320) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2mhma_ : (ASP60) (GLU103) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Mitochondrial cytochrome c |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1r44a_ : (LYS73) (GLY119) [view usage] : d.65.1.4 |Hedgehog/DD-peptidase |Hedgehog/DD-peptidase |VanX-like |D-Ala-D-Ala dipeptidase VanX |Enterococcus faecium [TaxId: 1352]
d1fiua_ : (LEU246) (VAL286) [view usage] : c.52.1.10 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease NgoIV |Restriction endonuclease NgoIV |Neisseria gonorrhoeae [TaxId: 485]
d1ipea_ : (THR194) (ALA230) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Tropinone reductase |Jimsonweed (Datura stramonium), II [TaxId: 4076]
d1m1ra_ : (ASP46) (LYS91) [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain |Shewanella oneidensis [TaxId: 70863]
d1t77a1 : (THR2307) (ARG2352) [view usage] : a.169.1.1 |BEACH domain |BEACH domain |BEACH domain |Lipopolysaccharide-responsive and beige-like anchor protein LRBA |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.1, c.69, a.104, c.2, a.118, c.66, c.72, d.185, c.55, d.108, a.25, c.52, a.39, a.138, a.45, a.3, d.65, f.27, d.189,
a.5, a.169, d.324, g.50