Tableau information
Concept source: d1o7xc_ amino acid (a.a.) range (GLN77)(SER160)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN77) (LEU85) H1
(ILE93) (GLY140) H2
(SER151) (SER160) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -38.4° H2
H3 -48.0° -38.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1ecca1 : (LEU253) (LEU293) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Glutamine PRPP amidotransferase, C-terminal domain |Escherichia coli [TaxId: 562]
d1ayxa_ : (LEU18) (GLY47) [view usage] : a.102.1.1 |alpha/alpha toroid |Six-hairpin glycosidases |Glucoamylase |Glucoamylase |Yeast (Saccharomycopsis fibuligera) [TaxId: 4944]
d1u00a1 : (ASP577) (GLY610) [view usage] : a.8.4.1 |immunoglobulin/albumin-binding domain-like |Heat shock protein 70kD (HSP70), C-terminal subdomain |Heat shock protein 70kD (HSP70), C-terminal subdomain |Chaperone protein hscA (Hsc66) |Escherichia coli [TaxId: 562]
d4asia1 : (LEU1619) (ALA1657) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1zs4d_ : (ILE40) (THR79) [view usage] : a.35.1.9 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |Bacteriophage CII protein |Regulatory protein cII |Bacteriophage lambda [TaxId: 10710]
d1epwa4 : (GLU585) (ILE644) [view usage] : h.4.2.1 |Antiparallel coiled-coil |Clostridium neurotoxins, "coiled-coil" domain |Clostridium neurotoxins, "coiled-coil" domain |Botulinum neurotoxin |Clostridium botulinum, serotype B [TaxId: 1491]
d4en4a_ : (SER285) (ASP302) [view usage] : c.72.1.5 |Ribokinase-like |Ribokinase-like |PfkB-like kinase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ytub1 : (TYR360) (ARG406) [view usage] : c.55.3.10 |Ribonuclease H-like motif |Ribonuclease H-like |PIWI domain |Hypothetical protein AF1318 |Archaeoglobus fulgidus [TaxId: 2234]
d3b0ha3 : (LYS410) (ASN425) [view usage] : d.58.36.0 |Ferredoxin-like |Nitrite/Sulfite reductase N-terminal domain-like |automated matches |automated matches |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d2bvja_ : (VAL107) (ALA137) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces venezuelae [TaxId: 54571]
d3h3xr_ : (SER420) (ASP453) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |automated matches |Desulfovibrio fructosovorans [TaxId: 878]
d1vdha_ : (GLN152) (GLN180) [view usage] : d.58.4.10 |Ferredoxin-like |Dimeric alpha+beta barrel |Chlorite dismutase-like |Polyketide synthase CurD homologue TTHA1714/TTC1352 |Thermus thermophilus [TaxId: 274]
d1tqqa_ : (LEU3) (LEU39) [view usage] : f.5.1.1 |Outer membrane efflux proteins (OEP) |Outer membrane efflux proteins (OEP) |Outer membrane efflux proteins (OEP) |Integral outer membrane protein TolC, efflux pump component |Escherichia coli [TaxId: 562]
d2wc1a_ : (GLN157) (GLY177) [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |automated matches |Rhodobacter capsulatus [TaxId: 1061]
d1ecfb1 : (LEU253) (LEU293) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Glutamine PRPP amidotransferase, C-terminal domain |Escherichia coli [TaxId: 562]
d2zs7a_ : (ARG227) (ALA248) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d2rj6a_ : (TRP181) (GLU203) [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |Glycosyltransferase A catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d1ljra1 : (ASP88) (GLY124) [view usage] : a.45.1.1 |GST C-terminal domain-like |GST C-terminal domain-like |Glutathione S-transferase (GST), C-terminal domain |Class theta GST |Human (Homo sapiens) [TaxId: 9606]
d1r5aa1 : (ASP88) (LEU120) [view usage] : a.45.1.1 |GST C-terminal domain-like |GST C-terminal domain-like |Glutathione S-transferase (GST), C-terminal domain |Class delta GST |Mosquito (Anopheles dirus b), isozyme 1-5 [TaxId: 123217]
d4k3wb_ : (GLU84) (GLU106) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Marinobacter aquaeolei [TaxId: 351348]
d4iqgd_ : (LEU102) (GLY132) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Polaromonas sp. [TaxId: 296591]
d1qbeb_ : (THR101) (LEU128) [view usage] : d.85.1.1 |RNA bacteriophage capsid protein |RNA bacteriophage capsid protein |RNA bacteriophage capsid protein |Qbeta coat protein |Bacteriophage Qbeta [TaxId: 39803]
d1rpaa_ : (PRO130) (LYS153) [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |Prostatic acid phosphatase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1z9ca_ : (GLN13) (LEU36) [view usage] : a.4.5.28 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |MarR-like transcriptional regulators |Organic hydroperoxide resistance transcriptional regulator OhrR |Bacillus subtilis [TaxId: 1423]
d1r46a2 : (GLU59) (GLY85) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Melibiase |Human (Homo sapiens) [TaxId: 9606]
d3maka2 : (CYS87) (LYS120) [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2riza_ : (TRP181) (GLU203) [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |Glycosyltransferase A catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d1fura_ : (ASN394) (ILE416) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Fumarase |Escherichia coli [TaxId: 562]
d4mm0a_ : (LEU97) (GLY128) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces griseoviridis [TaxId: 45398]
d1wl2a_ : (LYS156) (GLN176) [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |automated matches |Thermotoga maritima [TaxId: 243274]
d4uaxa_ : (VAL93) (VAL120) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d1sk8a_ : (CYS192) (LEU224) [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) |Aspergillus fumigatus [TaxId: 5085]
d2akja1 : (GLU410) (GLU425) [view usage] : d.58.36.1 |Ferredoxin-like |Nitrite/Sulfite reductase N-terminal domain-like |Duplicated SiR/NiR-like domains 1 and 3 |Ferredoxin--nitrite reductase, NIR |Spinach (Spinacia oleracea) [TaxId: 3562]
d2c3qa2 : (LEU89) (GLY125) [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3wc9b_ : (PRO195) (GLY227) [view usage] : a.128.1.2 |Terpenoid synthases |Terpenoid synthases |Squalene synthase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ndfa1 : (SER296) (ASN320) [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Carnitine acetyltransferase |Mouse (Mus musculus) [TaxId: 10090]
d3h3xq_ : (SER420) (ASP453) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |automated matches |Desulfovibrio fructosovorans [TaxId: 878]
d2z6pa_ : (GLY133) (GLY157) [view usage] : d.20.1.4 |UBC-like |UBC-like |UFC1-like |Ufm1-conjugating enzyme 1, UFC1 |Human (Homo sapiens) [TaxId: 9606]
d1gh6b2 : (SER646) (SER671) [view usage] : a.74.1.3 |Cyclin-like |Cyclin-like |Retinoblastoma tumor suppressor domains |Retinoblastoma tumor suppressor domains |Human (Homo sapiens) [TaxId: 9606]
d1otwb_ : (GLU170) (ALA201) [view usage] : a.132.1.4 |Heme oxygenase-like |Heme oxygenase-like |PqqC-like |Coenzyme PQQ synthesis protein C, PqqC |Klebsiella pneumoniae [TaxId: 573]
d1iawa_ : (ASP226) (GLY245) [view usage] : c.52.1.9 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease NaeI |Restriction endonuclease NaeI |Nocardia aerocolonigenes [TaxId: 68170]
d4m1ha_ : (SER174) (ASN211) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Chlamydia trachomatis [TaxId: 813]
d3kpaa_ : (GLY132) (GLY156) [view usage] : d.20.1.4 |UBC-like |UBC-like |UFC1-like |automated matches |Leishmania major [TaxId: 5664]
d1rsrb_ : (PRO133) (GLY171) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Escherichia coli [TaxId: 562]
d2w5ua_ : (GLN144) (ALA164) [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |automated matches |Helicobacter pylori [TaxId: 210]
d1jkmb_ : (HIS278) (ARG295) [view usage] : c.69.1.2 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase |Carboxylesterase |Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
d2z6oa_ : (GLY133) (GLY157) [view usage] : d.20.1.4 |UBC-like |UBC-like |UFC1-like |Ufm1-conjugating enzyme 1, UFC1 |Human (Homo sapiens) [TaxId: 9606]
d3m02a2 : (THR528) (ASP544) [view usage] : a.128.1.3 |Terpenoid synthases |Terpenoid synthases |Terpenoid cyclase C-terminal domain |automated matches |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d1t0rb_ : (GLY184) (ALA212) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouE |Pseudomonas stutzeri [TaxId: 316]
d1ww9a2 : (ASP332) (GLU371) [view usage] : d.129.3.3 |TBP-like |Bet v1-like |Ring hydroxylating alpha subunit catalytic domain |Terminal oxygenase component of carbazole CarAa |Janthinobacterium sp. J3 [TaxId: 213804]
d1na6b2 : (PRO214) (GLY244) [view usage] : c.52.1.22 |Restriction endonuclease-like |Restriction endonuclease-like |Type II restriction endonuclease catalytic domain |Restriction endonuclease EcoRII, C-terminal domain |Escherichia coli [TaxId: 562]
d3d5ka_ : (LEU264) (PHE297) [view usage] : f.5.1.1 |Outer membrane efflux proteins (OEP) |Outer membrane efflux proteins (OEP) |Outer membrane efflux proteins (OEP) |Outer membrane protein OprM |Pseudomonas aeruginosa [TaxId: 287]
d1y67a1 : (PRO64) (ILE87) [view usage] : a.2.11.1 |Long alpha-hairpin |Fe,Mn superoxide dismutase (SOD), N-terminal domain |Fe,Mn superoxide dismutase (SOD), N-terminal domain |Mn superoxide dismutase (MnSOD) |Deinococcus radiodurans [TaxId: 1299]
d1l6la_ : (VAL7) (GLY71) [view usage] : h.6.1.1 |Apolipoprotein A-II |Apolipoprotein A-II |Apolipoprotein A-II |Apolipoprotein A-II |Human (Homo sapiens) [TaxId: 9606]
d3is9a1 : (TRP153) (ASN175) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
d4iqgb_ : (LEU102) (GLY132) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Polaromonas sp. [TaxId: 296591]
d2bc4b1 : (LYS65) (ARG93) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1rtwb_ : (PRO62) (LEU90) [view usage] : a.132.1.3 |Heme oxygenase-like |Heme oxygenase-like |TENA/THI-4 |Putative transcriptional activator PF1337 |Pyrococcus furiosus [TaxId: 2261]
d2abka_ : (LYS172) (ILE188) [view usage] : a.96.1.1 |DNA-glycosylase |DNA-glycosylase |Endonuclease III |Endonuclease III |Escherichia coli [TaxId: 562]
d2dy4c2 : (GLY469) (LYS529) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d2dy4c2 : (SER537) (ASN572) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d5eata2 : (PRO530) (ASP544) [view usage] : a.128.1.3 |Terpenoid synthases |Terpenoid synthases |Terpenoid cyclase C-terminal domain |5-Epi-aristolochene synthase |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d2evca_ : (THR7) (VAL32) [view usage] : d.127.1.1 |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Methionine aminopeptidase |Escherichia coli [TaxId: 562]
d2j3wa_ : (LYS27) (SER56) [view usage] : d.110.4.3 |Profilin-like |SNARE-like |Sedlin (SEDL) |Sedlin (SEDL) |Mouse (Mus musculus) [TaxId: 10090]
d2oara1 : (VAL86) (ARG118) [view usage] : f.16.1.1 |Gated mechanosensitive channel |Gated mechanosensitive channel |Gated mechanosensitive channel |Gated mechanosensitive channel |Mycobacterium tuberculosis [TaxId: 1773]
d3v0oa_ : (ARG180) (ASP205) [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3zvjd_ : (CYS48) (ASN66) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
d3vk9c2 : (ASP88) (GLY121) [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Silkworm (Bombyx mori) [TaxId: 7091]
d1gl9b2 : (THR284) (PHE299) [view usage] : c.37.1.16 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Helicase-like "domain" of reverse gyrase |Helicase-like "domain" of reverse gyrase |Archaeoglobus fulgidus [TaxId: 2234]
d3vk9a2 : (ASP88) (GLY121) [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Silkworm (Bombyx mori) [TaxId: 7091]
d2lsta_ : (CYS34) (ALA53) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Thermus thermophilus [TaxId: 262724]
d1v9db_ : (ARG917) (LYS952) [view usage] : a.207.1.1 |Formin homology 2 domain (FH2 domain) |Formin homology 2 domain (FH2 domain) |Formin homology 2 domain (FH2 domain) |Diaphanous protein homolog 1, dia1 |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.1, c.69, a.104, c.2, d.58, c.68, a.128, a.102, c.14, a.127, e.18, d.129, c.72, c.23, c.37, c.47, c.55, a.103, d.127,
c.60, a.96, a.132, d.20, d.110, c.43, a.25, d.19, c.61, c.52, a.4, d.85, a.45, a.74, h.4, a.8, a.35, a.2, a.207, f.5,
f.16, h.6