Tableau information
Concept source: d1yf2a1 amino acid (a.a.) range (GLU126)(THR148)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU126) (ASN137) H1
(ASN137) (LYS143) H2
(LYS143) (THR148) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 58.6° H2
H3 43.4° -41.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2cchb1 : (HIS183) (GLN203) [view usage] : a.74.1.1 |Cyclin-like |Cyclin-like |Cyclin |Cyclin A |Human (Homo sapiens) [TaxId: 9606]
d3zlrb_ : (GLU179) (SER203) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1fq1a_ : (GLY176) (HIS199) [view usage] : c.45.1.1 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Dual specificity phosphatase-like |Kinase associated phosphatase (kap) |Human (Homo sapiens) [TaxId: 9606]
d4koqa_ : (THR216) (GLU250) [view usage] : d.18.1.2 |ssDNA-binding transcriptional regulator domain |ssDNA-binding transcriptional regulator domain |Plant transcriptional regulator PBF-2 |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d3b0ta_ : (PRO373) (VAL421) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Vitamin D nuclear receptor |Human (Homo sapiens) [TaxId: 9606]
d2axtv_ : (THR30) (HIS67) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |automated matches |Thermosynechococcus elongatus [TaxId: 32046]
d1k9xa_ : (TYR156) (GLU193) [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |Thermostable carboxypeptidase 1 |Pyrococcus furiosus [TaxId: 2261]
d2g7la1 : (TYR57) (VAL78) [view usage] : a.4.1.9 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |Tetracyclin repressor-like, N-terminal domain |Putative transcriptional regulator SCO7704 |Streptomyces coelicolor [TaxId: 1902]
d3hmua_ : (PRO327) (LYS360) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Silicibacter pomeroyi [TaxId: 89184]
d1ekeb_ : (PRO153) (GLN224) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |Class II ribonuclease H (RNase HII) |Methanococcus jannaschii [TaxId: 2190]
d4bcnd1 : (TYR178) (GLN203) [view usage] : a.74.1.1 |Cyclin-like |Cyclin-like |Cyclin |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1v5va2 : (LEU262) (ARG309) [view usage] : d.250.1.1 |Folate-binding domain |Folate-binding domain |Aminomethyltransferase folate-binding domain |Glycine cleavage system T protein, GcvT |Pyrococcus horikoshii [TaxId: 53953]
d2cmba_ : (ALA189) (GLY209) [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2h1og1 : (SER10) (GLY60) [view usage] : a.43.1.8 |Ribbon-helix-helix |Ribbon-helix-helix |Trafficking protein A-like |Trafficking protein A |Neisseria gonorrhoeae [TaxId: 485]
d1t93a_ : (PRO98) (ARG119) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Streptomyces coelicolor [TaxId: 100226]
d1uaxa_ : (GLU139) (ARG209) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |Class II ribonuclease H (RNase HII) |Pyrococcus horikoshii [TaxId: 53953]
d1s1qc_ : (LYS118) (GLU138) [view usage] : d.20.1.2 |UBC-like |UBC-like |UEV domain |Tumor susceptibility gene 101 (TSG101) |Human (Homo sapiens) [TaxId: 9606]
d3p3oa_ : (ALA96) (LEU132) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces thioluteus [TaxId: 66431]
d1zaxa1 : (THR124) (LYS176) [view usage] : d.58.62.1 |Ferredoxin-like |Ribosomal protein L10-like |Ribosomal protein L10-like |Ribosomal protein L10 |Thermotoga maritima [TaxId: 2336]
d4i3zb1 : (GLN179) (GLN203) [view usage] : a.74.1.1 |Cyclin-like |Cyclin-like |Cyclin |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1hdja_ : (ASP3) (LYS36) [view usage] : a.2.3.1 |Long alpha-hairpin |Chaperone J-domain |Chaperone J-domain |HSP40 |Human (Homo sapiens) [TaxId: 9606]
d1qdlb_ : (LYS60) (THR78) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |Anthranilate synthase GAT subunit, TrpG |Sulfolobus solfataricus [TaxId: 2287]
d3a04a_ : (ALA172) (GLY205) [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Aeropyrum pernix [TaxId: 56636]
d4bzsa_ : (LYS172) (ASN203) [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3zk5a_ : (PRO98) (ALA136) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces venezuelae [TaxId: 54571]
d2qi9a_ : (TRP188) (LEU216) [view usage] : f.22.1.1 |ABC transporter involved in vitamin B12 uptake, BtuC |ABC transporter involved in vitamin B12 uptake, BtuC |ABC transporter involved in vitamin B12 uptake, BtuC |ABC transporter involved in vitamin B12 uptake, BtuC |Escherichia coli [TaxId: 562]
d1kf6d_ : (GLU10) (GLY42) [view usage] : f.21.2.2 |Heme-binding four-helical bundle |Fumarate reductase respiratory complex transmembrane subunits |Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD) |Fumarate reductase subunit FrdD |Escherichia coli [TaxId: 562]
d1vlha_ : (SER119) (LYS157) [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |Phosphopantetheine adenylyltransferase |Thermotoga maritima [TaxId: 2336]
d1vina1 : (ILE182) (GLN203) [view usage] : a.74.1.1 |Cyclin-like |Cyclin-like |Cyclin |Cyclin A |Cow (Bos taurus) [TaxId: 9913]
d2ga0a_ : (ASP154) (LEU201) [view usage] : a.24.12.0 |Four-helical up-and-down bundle |Outer surface protein C (OspC) |automated matches |automated matches |Borrelia turicatae [TaxId: 142]
d1yjgd_ : (LYS153) (ALA200) [view usage] : a.24.12.0 |Four-helical up-and-down bundle |Outer surface protein C (OspC) |automated matches |automated matches |Borrelia turicatae [TaxId: 142]
d1szva_ : (TYR37) (ASN61) [view usage] : d.110.7.1 |Profilin-like |Roadblock/LC7 domain |Roadblock/LC7 domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3dg6a1 : (ARG51) (ILE75) [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d2bsqg1 : (SER10) (GLY60) [view usage] : a.43.1.8 |Ribbon-helix-helix |Ribbon-helix-helix |Trafficking protein A-like |Trafficking protein A |Neisseria gonorrhoeae [TaxId: 485]
d1otwb_ : (TRP137) (PRO166) [view usage] : a.132.1.4 |Heme oxygenase-like |Heme oxygenase-like |PqqC-like |Coenzyme PQQ synthesis protein C, PqqC |Klebsiella pneumoniae [TaxId: 573]
d3tnwb1 : (HIS179) (GLN203) [view usage] : a.74.1.1 |Cyclin-like |Cyclin-like |Cyclin |automated matches |Cow (Bos taurus) [TaxId: 9913]
d2c6fb_ : (LYS172) (ASN203) [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3gw9b_ : (PRO99) (GLN140) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d1g1ub_ : (VAL232) (SER260) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Retinoid-X receptor alpha (RXR-alpha) |Human (Homo sapiens) [TaxId: 9606]
d3zv7a_ : (SER228) (ASN251) [view usage] : c.69.1.1 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetylcholinesterase-like |automated matches |Pacific electric ray (Torpedo californica) [TaxId: 7787]
d1se6b_ : (PRO98) (GLY139) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Streptomyces coelicolor [TaxId: 100226]
d3p83d_ : (GLU27) (LEU41) [view usage] : c.55.3.0 |Ribonuclease H-like motif |Ribonuclease H-like |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d4kood_ : (THR212) (HIS248) [view usage] : d.18.1.2 |ssDNA-binding transcriptional regulator domain |ssDNA-binding transcriptional regulator domain |Plant transcriptional regulator PBF-2 |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1y54a_ : (ALA151) (LYS183) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Enterobacter cloacae [TaxId: 550]
d4jvlb_ : (SER3) (PHE33) [view usage] : c.37.1.5 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |PAPS sulfotransferase |Estrogen sulfotransferase (STE, sult1e1) |Human (Homo sapiens) [TaxId: 9606]
d4a19u_ : (VAL166) (GLU203) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, cytoplasmic (60S subunit) |Tetrahymena thermophila [TaxId: 5911]
d1y6ia2 : (GLU173) (GLY232) [view usage] : a.261.1.1 |GUN4-like |GUN4-like |GUN4-like |Mg-chelatase cofactor Gun4 |Synechocystis sp. PCC 6803 [TaxId: 1148]
d1f8na1 : (HIS522) (THR556) [view usage] : a.119.1.1 |Lipoxigenase |Lipoxigenase |Plant lipoxigenases |Lipoxigenase, C-terminal domain |Soybean (Glycine max), isozyme L1 [TaxId: 3847]
d2iuka2 : (HIS548) (ASN574) [view usage] : a.119.1.1 |Lipoxigenase |Lipoxigenase |Plant lipoxigenases |automated matches |Soybean (Glycine max) [TaxId: 3847]
d4ca5a_ : (TYR197) (GLU225) [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |Angiotensin converting enzyme, ACE |Human (Homo sapiens) [TaxId: 9606]
d4jvmb_ : (SER3) (PHE33) [view usage] : c.37.1.5 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |PAPS sulfotransferase |Estrogen sulfotransferase (STE, sult1e1) |Human (Homo sapiens) [TaxId: 9606]
d1xrda1 : (PRO10) (VAL49) [view usage] : f.3.1.1 |Light-harvesting complex subunits |Light-harvesting complex subunits |Light-harvesting complex subunits |Light-harvesting complex subunits |Rhodospirillum rubrum [TaxId: 1085]
d2f7mf_ : (ASP184) (GLY218) [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2pg6c_ : (ASN281) (HIS320) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1u65a_ : (SER228) (ASN253) [view usage] : c.69.1.1 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetylcholinesterase-like |Acetylcholinesterase |Pacific electric ray (Torpedo californica) [TaxId: 7787]
d3v92b2 : (HIS390) (ASN425) [view usage] : a.119.1.0 |Lipoxigenase |Lipoxigenase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2iuja2 : (HIS536) (ASN562) [view usage] : a.119.1.1 |Lipoxigenase |Lipoxigenase |Plant lipoxigenases |automated matches |Soybean (Glycine max) [TaxId: 3847]
d1vlhb_ : (SER119) (GLU158) [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |Phosphopantetheine adenylyltransferase |Thermotoga maritima [TaxId: 2336]
d3ne4a_ : (ALA70) (GLN111) [view usage] : e.1.1.1 |Serpins |Serpins |Serpins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4bckd1 : (TYR178) (GLN203) [view usage] : a.74.1.1 |Cyclin-like |Cyclin-like |Cyclin |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.3, a.119, c.67, c.69, a.104, d.58, i.1, c.26, a.128, d.92, c.45, c.23, c.37, c.55, a.132, a.123, d.20, d.110, f.21, d.250,
e.1, a.4, d.287, a.3, f.1, a.74, d.54, a.24, f.22, a.2, d.18, a.43, a.261, f.3