Tableau information
Concept source: d3p0cb_ amino acid (a.a.) range (ASN80)(LEU115)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN80) (VAL85) H1
(VAL85) (ALA102) H2
(ARG109) (LEU115) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -47.5° H2
H3 -111.6° -140.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4v19q_ : (ARG192) (LYS238) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, mitochondrial (54S or 39S subunit) |Pig (Sus scrofa) [TaxId: 9823]
d1mi6a_ : (GLU51) (PHE119) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |70S ribosome functional complex |Escherichia coli [TaxId: 562]
d1g8xa_ : (GLU264) (LEU296) [view usage] : k.1.1.1 |Hybrid and chimeric proteins |Hybrid and chimeric proteins |Hybrid and chimeric proteins |Genetically engineered molecular motor |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
d1tb5a_ : (ASP433) (MET483) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b |Human (Homo sapiens) [TaxId: 9606]
d3v4ea_ : (GLU3) (GLN55) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
d3nz2a_ : (SER4) (PHE53) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Vibrio cholerae [TaxId: 243277]
d3m52a_ : (SER85) (ALA115) [view usage] : d.42.1.0 |POZ domain |POZ domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3ftta_ : (GLU3) (GLN55) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
d3hj3a2 : (TRP316) (ARG333) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |Cryptosporidium hominis [TaxId: 237895]
d3nz2c_ : (SER4) (PHE53) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Vibrio cholerae [TaxId: 243277]
d4h81a1 : (SER55) (ASN89) [view usage] : a.29.5.0 |Bromodomain-like |alpha-ketoacid dehydrogenase kinase, N-terminal domain |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3tuia_ : (SER2) (ILE66) [view usage] : f.58.1.1 |MetI-like |MetI-like |MetI-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2g77a1 : (ASN300) (THR344) [view usage] : a.69.2.1 |Left-handed superhelix |Ypt/Rab-GAP domain of gyp1p |Ypt/Rab-GAP domain of gyp1p |Ypt/Rab-GAP domain of gyp1p |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1czan3 : (GLN466) (ALA507) [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Mammalian type I hexokinase |Human (Homo sapiens) [TaxId: 9606]
d1ux4a_ : (SER1537) (GLN1587) [view usage] : a.207.1.1 |Formin homology 2 domain (FH2 domain) |Formin homology 2 domain (FH2 domain) |Formin homology 2 domain (FH2 domain) |Bni1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1o7fa2 : (TYR150) (VAL164) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |Regulatory domain of Epac2, domains 1 and 3 |Mouse (Mus musculus) [TaxId: 10090]
d4hhha2 : (LEU437) (ILE465) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |automated matches |Pea (Pisum sativum) [TaxId: 3888]
d4e4ka_ : (GLN430) (TYR473) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Peroxisome proliferator activated receptor gamma, PPAR-gamma |Human (Homo sapiens) [TaxId: 9606]
d1f9oa_ : (GLY407) (LEU438) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Processive endocellulase CelF (Cel48F) |Clostridium cellulolyticum [TaxId: 1521]
d1z6aa3 : (ILE594) (GLY614) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |automated matches |Sulfolobus solfataricus [TaxId: 273057]
d3p0cb_ : (ASN80) (LEU115) [view usage] : d.189.1.0 |PX domain |PX domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3dcta_ : (ASP312) (SER355) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3dcta_ : (HIS429) (TRP469) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2qeta_ : (THR158) (ASN189) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |automated matches |Phytolacca dioica [TaxId: 29725]
d1f9da_ : (GLY407) (LEU438) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Processive endocellulase CelF (Cel48F) |Clostridium cellulolyticum [TaxId: 1521]
d1ldma2 : (LEU227) (ASN263) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Lactate dehydrogenase |Dogfish (Squalus acanthias) [TaxId: 7797]
d4k8va1 : (PRO147) (VAL192) [view usage] : d.218.1.15 |Nucleotidyltransferase |Nucleotidyltransferase |cGAMP synthase, cGAS N-terminal domain |cGAMP synthase, cGAS N-terminal domain |Mouse (Mus musculus) [TaxId: 10090]
d3ohue_ : (SER102) (SER124) [view usage] : d.42.1.0 |POZ domain |POZ domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3llrd_ : (ASP117) (GLU149) [view usage] : b.34.9.0 |SH3-like barrel |Tudor/PWWP/MBT |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3hjea1 : (VAL372) (GLU406) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d3fs1a_ : (ARG324) (GLY367) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1hbza_ : (ARG334) (ARG362) [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Micrococcus lysodeikticus [TaxId: 1270]
d3p88a_ : (ASP312) (SER355) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Bile acid receptor FXR |Human (Homo sapiens) [TaxId: 9606]
d3ir4a2 : (PRO84) (SER129) [view usage] : a.45.1.1 |GST C-terminal domain-like |GST C-terminal domain-like |Glutathione S-transferase (GST), C-terminal domain |automated matches |Salmonella enterica [TaxId: 99287]
d3eqaa_ : (SER388) (SER455) [view usage] : a.102.1.1 |alpha/alpha toroid |Six-hairpin glycosidases |Glucoamylase |automated matches |Aspergillus niger [TaxId: 5061]
d4h7qa1 : (SER55) (ASN89) [view usage] : a.29.5.0 |Bromodomain-like |alpha-ketoacid dehydrogenase kinase, N-terminal domain |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3u5em_ : (VAL90) (ALA138) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
d1ot7a_ : (ASP309) (ARG350) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Bile acid receptor FXR |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1j32a_ : (GLU203) (ARG228) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Phormidium lapideum [TaxId: 32060]
d1dgkn3 : (GLN466) (ALA507) [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Mammalian type I hexokinase |Human (Homo sapiens) [TaxId: 9606]
d2fgea1 : (ILE710) (LEU752) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Presequence protease 1, PREP1 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1ya7q_ : (ARG57) (GLY126) [view usage] : a.24.8.1 |Four-helical up-and-down bundle |Proteasome activator |Proteasome activator |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d1gwea_ : (ARG334) (ARG362) [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Micrococcus lysodeikticus [TaxId: 1270]
d1nija1 : (ASP131) (ALA152) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Hypothetical protein YjiA, N-terminal domain |Escherichia coli [TaxId: 562]
d4e01a1 : (HIS56) (ASN89) [view usage] : a.29.5.0 |Bromodomain-like |alpha-ketoacid dehydrogenase kinase, N-terminal domain |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.5, c.1, b.82, c.67, b.81, i.1, a.102, d.117, d.165, a.211, c.37, d.185, c.55, a.123, b.34, d.162, a.45, a.29, d.42, d.218,
a.24, f.58, a.69, d.189, k.1, a.207