Tableau information
Concept source: d4kenb_ amino acid (a.a.) range (TRP93)(THR111)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(TRP93) (THR97) H1
(ALA98) (ILE104) H2
(THR105) (THR111) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -129.6° H2
H3 104.0° 95.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4pj0c_ : (GLY38) (GLY85) [view usage] : f.55.1.1 |Photosystem II antenna protein-like |Photosystem II antenna protein-like |Photosystem II antenna protein-like |automated matches |Thermosynechococcus elongatus [TaxId: 197221]
d4u0xa_ : (TRP93) (THR111) [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Acinetobacter baumannii [TaxId: 470]
d3cvua2 : (SER271) (ARG318) [view usage] : a.99.1.0 |Cryptochrome/photolyase FAD-binding domain |Cryptochrome/photolyase FAD-binding domain |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d3etea2 : (SER451) (ASN494) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |automated matches |Cow (Bos taurus) [TaxId: 9913]
d1fswa_ : (TRP93) (THR111) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Escherichia coli, cephalosporinase [TaxId: 562]
d1k9xa_ : (PHE444) (GLY482) [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |Thermostable carboxypeptidase 1 |Pyrococcus furiosus [TaxId: 2261]
d1s6ra_ : (TRP93) (THR111) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]
d4u0xb_ : (LYS94) (THR111) [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Acinetobacter baumannii [TaxId: 470]
d1ux4a_ : (SER1474) (SER1537) [view usage] : a.207.1.1 |Formin homology 2 domain (FH2 domain) |Formin homology 2 domain (FH2 domain) |Formin homology 2 domain (FH2 domain) |Bni1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4ahqa_ : (GLY214) (HIS261) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]
d2nvpa1 : (ILE134) (SER182) [view usage] : a.102.1.8 |alpha/alpha toroid |Six-hairpin glycosidases |CPF0428-like |Hypothetical protein CPF0428 |Clostridium perfringens [TaxId: 1502]
d1b8ra_ : (GLY34) (PHE66) [view usage] : a.39.1.4 |EF Hand-like |EF-hand |Parvalbumin |Parvalbumin |Carp (Cyprinus carpio) [TaxId: 7962]
d4hs9a_ : (GLU207) (ARG241) [view usage] : c.69.1.18 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Bacterial lipase |Lipase A |Proteus mirabilis [TaxId: 584]
d2dnsa_ : (THR126) (GLY182) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |D-Amino acid amidase DaaA |Ochrobactrum anthropi [TaxId: 529]
d1atja_ : (LEU131) (PHE172) [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Plant peroxidase |Horseradish (Armoracia rusticana) [TaxId: 3704]
d2es0a_ : (VAL380) (GLU423) [view usage] : a.91.1.0 |Regulator of G-protein signaling, RGS |Regulator of G-protein signaling, RGS |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3s4xa_ : (TRP93) (THR111) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]
d1nal1_ : (TRP215) (ASP263) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |N-acetylneuraminate lyase |Escherichia coli [TaxId: 562]
d1ux5a_ : (SER1474) (THR1536) [view usage] : a.207.1.1 |Formin homology 2 domain (FH2 domain) |Formin homology 2 domain (FH2 domain) |Formin homology 2 domain (FH2 domain) |Bni1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1tgoa1 : (TYR291) (SER347) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of family B DNA polymerases |Thermococcus gorgonarius [TaxId: 71997]
d1l0ea_ : (TRP93) (THR111) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Escherichia coli, cephalosporinase [TaxId: 562]
d1y54a_ : (TRP93) (THR111) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Enterobacter cloacae [TaxId: 550]
d4ahqd_ : (GLY214) (HIS261) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]
d2rada1 : (GLU178) (LEU219) [view usage] : c.150.1.3 |EreA/ChaN-like |EreA/ChaN-like |EreA-like |Succinoglycan biosynthesis protein BC3120 |Bacillus cereus [TaxId: 1396]
d1zc2a_ : (TRP93) (TYR112) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Klebsiella pneumoniae [TaxId: 573]
d1k02a_ : (ASP370) (GLY395) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Old yellow enzyme (OYE) |Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
d1w5cc_ : (ALA37) (GLY85) [view usage] : i.5.1.1 |Photosystems |Photosystems |Photosystems |Photosystem II |Thermosynechococcus vulcanus [TaxId: 32053]
d2c0lb_ : (SER22) (GLY52) [view usage] : d.106.1.1 |SCP-like |SCP-like |Sterol carrier protein, SCP |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1zc2b_ : (TRP93) (THR111) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Klebsiella pneumoniae [TaxId: 573]
d2gfnb2 : (ALA173) (ARG198) [view usage] : a.121.1.1 |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Probable transcriptional regulator RHA1_ro04631 |Rhodococcus sp. RHA1 [TaxId: 101510]
d3w53a_ : (PRO264) (SER289) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Micrococcus antarcticus [TaxId: 86171]
d2bida_ : (SER80) (GLU123) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Proapoptotic molecule Bid |Human (Homo sapiens) [TaxId: 9606]
d2blsa_ : (TRP93) (THR111) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Escherichia coli, cephalosporinase [TaxId: 562]
d4lcza_ : (GLY165) (ASP215) [view usage] : f.43.1.1 |Chlorophyll a-b binding protein |Chlorophyll a-b binding protein |Chlorophyll a-b binding protein |automated matches |Spinach (Spinacia oleracea) [TaxId: 3562]
d3hyba_ : (GLY52) (LEU105) [view usage] : a.280.1.1 |RbcX-like |RbcX-like |RbcX-like |RuBisCo chaperone RbcX |Anabaena sp. [TaxId: 1167]
d1rgya_ : (TRP93) (THR111) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Citrobacter freundii [TaxId: 546]
d2q0tb_ : (GLU157) (SER198) [view usage] : a.152.1.1 |AhpD-like |AhpD-like |AhpD |Hypothetical protein Bxeno_B2006 |Burkholderia xenovorans [TaxId: 36873]
d2wb2a2 : (SER271) (ARG318) [view usage] : a.99.1.0 |Cryptochrome/photolyase FAD-binding domain |Cryptochrome/photolyase FAD-binding domain |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.3, c.1, c.69, c.2, a.102, d.92, a.93, c.55, i.5, d.106, a.152, a.39, f.1, a.91, a.99, a.280, a.121, c.150, f.43, a.207,
f.55