Tableau information
Concept source: d3srza_ amino acid (a.a.) range (THR439)(SER468)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR439) (SER443) H1
(SER443) (GLN454) H2
(MET458) (SER468) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 51.3° H2
H3 127.3° -124.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1jr9a1 : (LEU15) (LYS52) [view usage] : a.2.11.1 |Long alpha-hairpin |Fe,Mn superoxide dismutase (SOD), N-terminal domain |Fe,Mn superoxide dismutase (SOD), N-terminal domain |Mn superoxide dismutase (MnSOD) |Bacillus halodenitrificans [TaxId: 1482]
d1gwta_ : (SER253) (ASN286) [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Plant peroxidase |Horseradish (Armoracia rusticana) [TaxId: 3704]
d1zt2b1 : (SER13) (GLY51) [view usage] : a.262.1.1 |PriB N-terminal domain-like |PriB N-terminal domain-like |PriB N-terminal domain-like |DNA primase large subunit PriB, N-terminal domain |Sulfolobus solfataricus [TaxId: 2287]
d1qgda2 : (SER288) (GLY331) [view usage] : c.36.1.10 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like PP module |Transketolase (TK), PP module |Escherichia coli [TaxId: 562]
d2iv7a1 : (ASP205) (THR229) [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |Lipopolysaccharide core biosynthesis protein RfaG |Escherichia coli [TaxId: 562]
d1fpxa2 : (THR140) (SER170) [view usage] : c.66.1.12 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Plant O-methyltransferase, C-terminal domain |Isoflavone O-methyltransferase |Alfalfa (Medicago sativa) [TaxId: 3879]
d1nr5b_ : (HIS230) (ASN268) [view usage] : e.22.1.1 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Dehydroquinate synthase, DHQS |Dehydroquinate synthase, DHQS |Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]
d1dpca_ : (ASP609) (LEU637) [view usage] : c.43.1.1 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |CAT-like |Dihydrolipoamide acetyltransferase |Azotobacter vinelandii [TaxId: 354]
d1tz7b_ : (GLU74) (HIS128) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Amylomaltase MalQ |Aquifex aeolicus [TaxId: 63363]
d3smpb2 : (LEU474) (ILE509) [view usage] : c.55.1.14 |Ribonuclease H-like motif |Actin-like ATPase domain |Fumble-like |Pantothenate kinase 1, PANK1 |Human (Homo sapiens) [TaxId: 9606]
d1yqya2 : (SER266) (GLN297) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Anthrax toxin lethal factor, middle domain |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d3ehma_ : (ASP83) (VAL137) [view usage] : a.118.8.0 |alpha-alpha superhelix |TPR-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
d4qgrb_ : (LEU6) (LEU47) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Brucella abortus [TaxId: 359391]
d3o0gd_ : (LYS254) (GLU292) [view usage] : a.74.1.1 |Cyclin-like |Cyclin-like |Cyclin |CDK5 activator 1 (NCK5a, p25) |Human (Homo sapiens) [TaxId: 9606]
d1hwwa1 : (GLY417) (HIS470) [view usage] : a.8.3.1 |immunoglobulin/albumin-binding domain-like |Families 57/38 glycoside transferase middle domain |alpha-mannosidase, domain 2 |Golgi alpha-mannosidase II |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2radb_ : (GLU178) (VAL199) [view usage] : c.150.1.3 |EreA/ChaN-like |EreA/ChaN-like |EreA-like |Succinoglycan biosynthesis protein BC3120 |Bacillus cereus [TaxId: 1396]
d3rnaa_ : (TRP365) (PRO390) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
d1unge_ : (CYS253) (ASP288) [view usage] : a.74.1.1 |Cyclin-like |Cyclin-like |Cyclin |CDK5 activator 1 (NCK5a, p25) |Human (Homo sapiens) [TaxId: 9606]
d1lnsa3 : (ASP411) (ASN448) [view usage] : c.69.1.21 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |PepX catalytic domain-like |X-Prolyl dipeptidyl aminopeptidase PepX, middle domain |Lactococcus lactis [TaxId: 1358]
d1kz7a1 : (PRO708) (ASP756) [view usage] : a.87.1.1 |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |Dbl's big sister, Dbs |Mouse (Mus musculus) [TaxId: 10090]
d1dpda_ : (ASP609) (LEU637) [view usage] : c.43.1.1 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |CAT-like |Dihydrolipoamide acetyltransferase |Azotobacter vinelandii [TaxId: 354]
d2os3a_ : (ALA3) (LEU65) [view usage] : d.167.1.1 |Peptide deformylase |Peptide deformylase |Peptide deformylase |Peptide deformylase |Streptococcus pyogenes [TaxId: 160490]
d2q7ra1 : (ASP2) (ALA63) [view usage] : f.56.1.1 |MAPEG domain-like |MAPEG domain-like |MAPEG domain |Arachidonate 5-lipoxygenase-activating protein, FLAP |Human (Homo sapiens) [TaxId: 9606]
d2wnia_ : (PRO223) (LYS275) [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d2i7na2 : (LEU474) (ASP507) [view usage] : c.55.1.14 |Ribonuclease H-like motif |Actin-like ATPase domain |Fumble-like |Pantothenate kinase 1, PANK1 |Human (Homo sapiens) [TaxId: 9606]
d1y8ba_ : (PRO538) (THR578) [view usage] : c.1.13.1 |TIM beta/alpha-barrel |Malate synthase G |Malate synthase G |Malate synthase G |Escherichia coli [TaxId: 562]
d1t3wb_ : (TRP522) (GLU577) [view usage] : a.236.1.1 |DNA primase DnaG, C-terminal domain |DNA primase DnaG, C-terminal domain |DNA primase DnaG, C-terminal domain |DNA primase DnaG, C-terminal domain |Escherichia coli [TaxId: 562]
d1htya1 : (GLY417) (HIS470) [view usage] : a.8.3.1 |immunoglobulin/albumin-binding domain-like |Families 57/38 glycoside transferase middle domain |alpha-mannosidase, domain 2 |Golgi alpha-mannosidase II |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d4v1ai_ : (VAL116) (LEU163) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, mitochondrial (54S or 39S subunit) |Pig (Sus scrofa) [TaxId: 9823]
d1js1x1 : (CYS6) (ARG35) [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Transcarbamylase-like protein |Bacteroides fragilis [TaxId: 817]
d2yvxa3 : (GLY277) (PRO321) [view usage] : f.57.1.1 |MgtE membrane domain-like |MgtE membrane domain-like |MgtE membrane domain-like |Mg2+ transporter MgtE |Thermus thermophilus [TaxId: 274]
d1ungd_ : (ALA256) (ASN291) [view usage] : a.74.1.1 |Cyclin-like |Cyclin-like |Cyclin |CDK5 activator 1 (NCK5a, p25) |Human (Homo sapiens) [TaxId: 9606]
d3n1za_ : (TRP365) (PRO390) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
d1g7da_ : (SER233) (GLU258) [view usage] : a.71.1.1 |ERP29 C domain-like |ERP29 C domain-like |ERP29 C domain-like |Endoplasmic reticulum protein ERP29, C-terminal domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1fp2a2 : (THR140) (SER170) [view usage] : c.66.1.12 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Plant O-methyltransferase, C-terminal domain |Isoflavone O-methyltransferase |Alfalfa (Medicago sativa) [TaxId: 3879]
d1f5xa_ : (GLY95) (ASN149) [view usage] : a.87.1.1 |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |RhoGEF Vav |Mouse (Mus musculus) [TaxId: 10090]
d2q7ma1 : (ASP2) (TYR64) [view usage] : f.56.1.1 |MAPEG domain-like |MAPEG domain-like |MAPEG domain |Arachidonate 5-lipoxygenase-activating protein, FLAP |Human (Homo sapiens) [TaxId: 9606]
d1t3la2 : (ASP270) (GLU289) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Guanylate kinase-like domain of the L-type calcium channel |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d4pkqa1 : (SER266) (GLN297) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d2iw1a_ : (ASP205) (THR229) [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |Lipopolysaccharide core biosynthesis protein RfaG |Escherichia coli [TaxId: 562]
d1ay0a1 : (GLN291) (GLY336) [view usage] : c.36.1.10 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like PP module |Transketolase (TK), PP module |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2gnoa2 : (PHE173) (SER208) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |gamma subunit of DNA polymerase III, N-domain |Thermotoga maritima [TaxId: 2336]
d4pkva1 : (SER266) (ILE298) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1b5sa_ : (ASP397) (MET425) [view usage] : c.43.1.1 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |CAT-like |Dihydrolipoamide acetyltransferase |Bacillus stearothermophilus [TaxId: 1422]
d3rn9a_ : (TRP365) (PRO390) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
d1gpua1 : (GLN291) (SER335) [view usage] : c.36.1.10 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like PP module |Transketolase (TK), PP module |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1tz7a1 : (GLU74) (HIS128) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Amylomaltase MalQ |Aquifex aeolicus [TaxId: 63363]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.67, c.69, i.1, a.118, c.68, c.66, a.93, e.22, c.37, c.36, c.55, d.166, c.87, c.60, c.78, c.43, a.25, d.167, a.74,
a.87, a.71, a.8, f.57, a.2, f.56, c.150, a.236, a.262