Tableau information
Concept source: d1u45a1 amino acid (a.a.) range (LEU396)(ASN468)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU396) (ASP402) H1
(ASP409) (GLN418) H2
(GLU440) (ASN468) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 51.4° H2
H3 45.6° 48.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4pica_ : (THR102) (HIS150) [view usage] : c.44.1.0 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |automated matches |automated matches |Geobacillus stearothermophilus [TaxId: 1422]
d1hjra_ : (ALA102) (ASN155) [view usage] : c.55.3.6 |Ribonuclease H-like motif |Ribonuclease H-like |RuvC resolvase |RuvC resolvase |Escherichia coli [TaxId: 562]
d4kzoa_ : (LEU216) (LYS243) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4c9zb_ : (CYS98) (LEU120) [view usage] : b.8.1.2 |TRAF domain-like |TRAF domain-like |SIAH, seven in absentia homolog |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3m8ra1 : (PRO373) (GLU421) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of prokaryotic DNA polymerase |Thermus aquaticus [TaxId: 271]
d3wccc_ : (VAL81) (GLU115) [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 353153]
d1an4a_ : (HIS204) (GLN256) [view usage] : a.38.1.1 |HLH-like |HLH, helix-loop-helix DNA-binding domain |HLH, helix-loop-helix DNA-binding domain |Usf B/HLH domain |Human (Homo sapiens) [TaxId: 9606]
d2xy8a_ : (LEU131) (GLY180) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |automated matches |Escherichia coli [TaxId: 562]
d2d5ra1 : (VAL195) (MET244) [view usage] : c.55.3.9 |Ribonuclease H-like motif |Ribonuclease H-like |CAF1-like ribonuclease |CCR4-NOT transcription complex subunit 7, CAF1 |Human (Homo sapiens) [TaxId: 9606]
d1af8a_ : (THR6) (ILE38) [view usage] : a.28.1.1 |Acyl carrier protein-like |ACP-like |Acyl-carrier protein (ACP) |Actinorhodin polyketide synthase acyl carrier protein, ACT ACP |Streptomyces coelicolor, A3(2) [TaxId: 1902]
d4etna_ : (THR104) (LYS147) [view usage] : c.44.1.0 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d4etma1 : (ARG110) (GLN155) [view usage] : c.44.1.0 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1aa2a_ : (MET35) (MET109) [view usage] : a.40.1.1 |CH domain-like |Calponin-homology domain, CH-domain |Calponin-homology domain, CH-domain |beta-spectrin |Human (Homo sapiens) [TaxId: 9606]
d1af0a2 : (TYR169) (TYR246) [view usage] : d.92.1.6 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Serralysin-like metalloprotease, catalytic (N-terminal) domain |Metalloprotease |Serratia marcescens [TaxId: 615]
d1itla_ : (ALA70) (LYS126) [view usage] : a.26.1.2 |4-helical cytokines |4-helical cytokines |Short-chain cytokines |Interleukin-4 (IL-4) |Human (Homo sapiens) [TaxId: 9606]
d1jxea1 : (PRO373) (LEU420) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of prokaryotic DNA polymerase |Thermus aquaticus [TaxId: 271]
d2f96a1 : (ALA164) (GLY217) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Ribonuclease T |Pseudomonas aeruginosa [TaxId: 287]
d1bala_ : (SER13) (HIS47) [view usage] : a.9.1.1 |Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex |Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex |Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex |E3-binding domain of dihydrolipoamide succinyltransferase |Escherichia coli [TaxId: 562]
d1pzra_ : (ASP63) (ARG117) [view usage] : a.38.2.1 |HLH-like |Docking domain B of the erythromycin polyketide synthase (DEBS) |Docking domain B of the erythromycin polyketide synthase (DEBS) |Erythronolide synthase |Saccharopolyspora erythraea [TaxId: 1836]
d1j53a_ : (LEU131) (GLY180) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |N-terminal exonuclease domain of the epsilon subunit of DNA polymerase III |Escherichia coli [TaxId: 562]
d2idoc_ : (LEU131) (GLY180) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |automated matches |Escherichia coli [TaxId: 562]
d4kk3a_ : (THR104) (ASP148) [view usage] : c.44.1.0 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |automated matches |automated matches |Bacillus subtilis [TaxId: 224308]
d3wfla_ : (ASP208) (VAL265) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Talaromyces trachyspermus [TaxId: 28566]
d1lbua1 : (GLU17) (GLN77) [view usage] : a.20.1.1 |PGBD-like |PGBD-like |Peptidoglycan binding domain, PGBD |Zn2+ DD-carboxypeptidase, N-terminal domain |Streptomyces albus G [TaxId: 1962]
d2y21j_ : (HIS276) (VAL328) [view usage] : a.274.1.1 |HAMP domain-like |HAMP domain-like |HAMP domain |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d2g9xb1 : (GLY171) (LYS194) [view usage] : a.74.1.1 |Cyclin-like |Cyclin-like |Cyclin |Cyclin A |Cow (Bos taurus) [TaxId: 9913]
d1ck7a6 : (THR45) (LYS99) [view usage] : a.20.1.2 |PGBD-like |PGBD-like |MMP N-terminal domain |Gelatinase A (MMP-2) |Human (Homo sapiens) [TaxId: 9606]
d1vs6q1 : (GLY6) (GLY72) [view usage] : a.144.2.1 |PABP domain-like |Ribosomal protein L20 |Ribosomal protein L20 |Ribosomal protein L20 |Escherichia coli [TaxId: 562]
d3ngya_ : (ALA152) (GLY205) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |automated matches |Escherichia coli [TaxId: 562]
d2fv5b_ : (LEU395) (SER464) [view usage] : d.92.1.10 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |TNF-alpha converting enzyme, TACE, catalytic domain |TNF-alpha converting enzyme, TACE, catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d4akza_ : (PRO135) (TYR155) [view usage] : d.17.4.26 |Cystatin-like |NTF2-like |VirB8-like |Type IV secretion system protein VirB8 |Brucella melitensis [TaxId: 29459]
d3l2fb1 : (THR63) (HIS110) [view usage] : a.83.1.0 |Guanido kinase N-terminal domain |Guanido kinase N-terminal domain |automated matches |automated matches |Namalycastis sp. [TaxId: 243920]
d1eaka1 : (THR45) (LYS99) [view usage] : a.20.1.2 |PGBD-like |PGBD-like |MMP N-terminal domain |Gelatinase A (MMP-2) |Human (Homo sapiens) [TaxId: 9606]
d4trib_ : (PRO84) (GLY124) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d1bgxt3 : (PRO373) (LEU420) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of prokaryotic DNA polymerase |Thermus aquaticus [TaxId: 271]
d1xtnb_ : (TYR45) (TYR98) [view usage] : d.189.1.1 |PX domain |PX domain |PX domain |Serine/threonine-protein kinase Sgk3, Cisk |Mouse (Mus musculus) [TaxId: 10090]
d3l2eb1 : (THR63) (HIS110) [view usage] : a.83.1.0 |Guanido kinase N-terminal domain |Guanido kinase N-terminal domain |automated matches |automated matches |Namalycastis sp. [TaxId: 243920]
d2oqmb_ : (VAL63) (ALA108) [view usage] : a.213.1.3 |DinB/YfiT-like putative metalloenzymes |DinB/YfiT-like putative metalloenzymes |Sden0562-like |Hypothetical protein Sden0562 |Shewanella denitrificans [TaxId: 192073]
d3ihoa_ : (GLY538) (ASN573) [view usage] : a.96.1.2 |DNA-glycosylase |DNA-glycosylase |Mismatch glycosylase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2guia_ : (LEU131) (GLY180) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |automated matches |Escherichia coli [TaxId: 562]
d2e7ua_ : (GLU239) (GLY256) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d1j5sa_ : (PRO96) (THR135) [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uronate isomerase TM0064 |Thermotoga maritima [TaxId: 2336]
d4nhff_ : (ALA130) (VAL149) [view usage] : d.17.4.0 |Cystatin-like |NTF2-like |automated matches |automated matches |Bartonella grahamii [TaxId: 634504]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.67, a.104, a.128, d.92, c.77, c.55, a.96, d.17, a.74, a.83, a.40, a.26, c.44, a.28, a.38, a.144, b.8, d.189, a.213,
a.20, a.9, a.274