Tableau information
Concept source: d2ie3a_ amino acid (a.a.) range (LEU29)(SER49)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU29) (LEU35) H1
(LEU35) (ALA41) H2
(GLY43) (SER49) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -61.0° H2
H3 -129.9° 114.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1o7fa1 : (LEU294) (ARG321) [view usage] : a.4.5.31 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |DEP domain |Regulatory domain of epac2, domain 2 |Mouse (Mus musculus) [TaxId: 10090]
d1mx3a1 : (GLU126) (SER167) [view usage] : c.2.1.4 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Formate/glycerate dehydrogenases, NAD-domain |Transcription corepressor CtbP |Human (Homo sapiens), Ctbp1 [TaxId: 9606]
d1htoa2 : (SER291) (VAL323) [view usage] : d.128.1.1 |Glutamine synthetase/guanido kinase |Glutamine synthetase/guanido kinase |Glutamine synthetase catalytic domain |Glutamine synthetase, C-terminal domain |Mycobacterium tuberculosis [TaxId: 1773]
d3zsna_ : (ASP328) (LEU367) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Micromonospora griseorubida [TaxId: 28040]
d1w07a2 : (LYS473) (LEU515) [view usage] : a.29.3.2 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |acyl-CoA oxidase C-terminal domains |Acyl-coenzyme A oxidase 1, domains 3 and 4 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d3fe1a1 : (ASP154) (ARG190) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3uk0a_ : (THR245) (VAL264) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 316057]
d4pxhc_ : (ASP339) (TYR377) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces sp. [TaxId: 1001349]
d1p8za2 : (PHE352) (VAL370) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d3hbfa_ : (PRO149) (ASP172) [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Medicago truncatula [TaxId: 3880]
d2y5na_ : (ASP328) (LEU367) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Micromonospora griseorubida [TaxId: 28040]
d4e3ta_ : (PHE313) (SER359) [view usage] : c.1.9.3 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Phosphotriesterase-like |automated matches |Brevundimonas diminuta [TaxId: 293]
d1u7xa_ : (SER106) (ALA138) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Tyrosyl-tRNA synthetase (TyrRS) |Methanococcus jannaschii [TaxId: 2190]
d3rysa_ : (HIS21) (LYS53) [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Arthrobacter aurescens [TaxId: 290340]
d1b8pa2 : (ARG219) (GLY259) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Malate dehydrogenase |Aquaspirillum arcticum [TaxId: 87645]
d2gkpa1 : (SER69) (PHE105) [view usage] : d.351.1.1 |NMB0488-like |NMB0488-like |NMB0488-like |Hypothetical protein NMB0488 |Neisseria meningitidis [TaxId: 487]
d3zowp_ : (CYS10) (THR40) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Cytochrome c552 |Nitrosomonas europaea [TaxId: 915]
d1sk8a_ : (ASP339) (ASP370) [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) |Aspergillus fumigatus [TaxId: 5085]
d3sbpg1 : (GLY106) (PHE123) [view usage] : b.69.3.1 |7-bladed beta-propeller |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |automated matches |Pseudomonas stutzeri [TaxId: 316]
d3sbpa1 : (GLY106) (PHE123) [view usage] : b.69.3.1 |7-bladed beta-propeller |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |automated matches |Pseudomonas stutzeri [TaxId: 316]
d2e74b1 : (ASN122) (LEU157) [view usage] : f.32.1.1 |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Subunit IV of the cytochrome b6f complex |Mastigocladus laminosus [TaxId: 83541]
d2nyla1 : (TRP257) (THR281) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Human (Homo sapiens) [TaxId: 9606]
d2fonb3 : (GLN473) (GLU514) [view usage] : a.29.3.0 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |automated matches |automated matches |Solanum lycopersicum [TaxId: 4081]
d2vsga_ : (THR262) (LYS296) [view usage] : h.4.1.1 |Antiparallel coiled-coil |Variant surface glycoprotein (N-terminal domain) |Variant surface glycoprotein (N-terminal domain) |Variant surface glycoprotein (N-terminal domain) |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d4updb_ : (PHE464) (ALA502) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Ophiostoma piceae [TaxId: 61273]
d1by1a_ : (SER51) (LEU95) [view usage] : a.87.1.1 |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |beta-pix |Human (Homo sapiens) [TaxId: 9606]
d4axhb1 : (THR392) (ARG414) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas sp. [TaxId: 1007495]
d3cqxa1 : (ASN151) (LYS188) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1ar1a_ : (THR213) (GLY261) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial aa3 type cytochrome c oxidase subunit I |Paracoccus denitrificans [TaxId: 266]
d3vpqa2 : (ASP171) (ALA199) [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Silkworm (Bombyx mori) [TaxId: 7091]
d3nvia_ : (ARG131) (PRO172) [view usage] : a.183.1.0 |Nop domain |Nop domain |automated matches |automated matches |Pyrococcus furiosus [TaxId: 186497]
d3r9sa_ : (ALA185) (GLY216) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium avium [TaxId: 243243]
d2y5nb_ : (ASP328) (LEU367) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Micromonospora griseorubida [TaxId: 28040]
d2qypa_ : (ASP2) (THR53) [view usage] : a.64.1.1 |Saposin-like |Saposin |NKL-like |Saposin C |Human (Homo sapiens) [TaxId: 9606]
d1n83a_ : (LEU304) (PHE372) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Orphan nuclear receptor ROR-alpha |Human (Homo sapiens) [TaxId: 9606]
d3zkka_ : (GLN328) (ALA378) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Bifidobacterium animalis [TaxId: 580050]
d2i6ea1 : (ALA217) (ASN258) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Hypothetical protein DR0370 |Deinococcus radiodurans [TaxId: 1299]
d1iz9a2 : (PHE218) (ILE249) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Malate dehydrogenase |Thermus thermophilus [TaxId: 274]
d4olqc_ : (ASP66) (SER97) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Hyphomonas neptunium [TaxId: 228405]
d3d2eb1 : (ASN151) (THR188) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Human (Homo sapiens) [TaxId: 9606]
d1uhna_ : (HIS115) (GLY156) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calcineurin B-like protein 2 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d3dvua_ : (SER6) (LYS65) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Bcl-2 homolog V-bcl-2 |Murid herpesvirus 4 [TaxId: 33708]
d4aw3a_ : (ASP328) (ARG366) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Micromonospora griseorubida [TaxId: 28040]
d3o8yb2 : (SER171) (ILE214) [view usage] : a.119.1.0 |Lipoxigenase |Lipoxigenase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4bgva1 : (THR125) (ILE147) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Picrophilus torridus [TaxId: 82076]
d1y37a_ : (PRO158) (ASP185) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Burkholderia sp. [TaxId: 384033]
d1bc9a_ : (LYS160) (GLN181) [view usage] : a.118.3.1 |alpha-alpha superhelix |Sec7 domain |Sec7 domain |Cytohesin-1/b2-1 |Human (Homo sapiens) [TaxId: 9606]
d1ii2a1 : (PRO469) (ALA515) [view usage] : c.91.1.1 |PEP carboxykinase-like |PEP carboxykinase-like |PEP carboxykinase C-terminal domain |Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) |Trypanosoma cruzi [TaxId: 5693]
d4jeia_ : (ASN270) (GLN291) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Yarrowia lipolytica [TaxId: 4952]
d1xtnb_ : (TYR98) (GLN119) [view usage] : d.189.1.1 |PX domain |PX domain |PX domain |Serine/threonine-protein kinase Sgk3, Cisk |Mouse (Mus musculus) [TaxId: 10090]
d3o8aa_ : (GLY350) (PHE417) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |automated matches |Plasmodium falciparum [TaxId: 36329]
d3sbpd1 : (GLY106) (PHE123) [view usage] : b.69.3.1 |7-bladed beta-propeller |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |automated matches |Pseudomonas stutzeri [TaxId: 316]
d4g6ub_ : (LEU68) (PHE104) [view usage] : d.351.1.0 |NMB0488-like |NMB0488-like |automated matches |automated matches |Escherichia coli [TaxId: 83334]
d1f1ha2 : (GLU292) (VAL323) [view usage] : d.128.1.1 |Glutamine synthetase/guanido kinase |Glutamine synthetase/guanido kinase |Glutamine synthetase catalytic domain |Glutamine synthetase, C-terminal domain |Salmonella typhimurium [TaxId: 90371]
d3hbja_ : (GLY148) (ASP172) [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Medicago truncatula [TaxId: 3880]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, a.119, c.69, c.94, a.104, c.2, b.69, a.118, c.26, d.157, c.93, c.14, c.55, c.87, c.60, a.123, f.24, a.4, a.39, d.162,
d.128, c.91, a.45, a.3, a.29, f.1, a.87, h.4, a.64, d.189, a.183, f.32, d.351