Tableau information
Concept source: d2bcva1 amino acid (a.a.) range (ASP272)(GLY320)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP272) (SER288) H1
(SER295) (SER301) H2
(LYS307) (GLY320) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 112.3° H2
H3 -58.9° 144.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3wyob_ : (LYS87) (GLY150) [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Horse (Equus caballus) [TaxId: 9796]
d4n09a_ : (ASP287) (GLN331) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Trypanosoma brucei [TaxId: 999953]
d3fk2c_ : (ASN1288) (LEU1328) [view usage] : a.116.1.0 |GTPase activation domain, GAP |GTPase activation domain, GAP |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2fgna_ : (ILE152) (GLY243) [view usage] : a.124.1.1 |Phospholipase C/P1 nuclease |Phospholipase C/P1 nuclease |Phospholipase C |Bacterial phosholipase C |Bacillus cereus [TaxId: 1396]
d3r7ka1 : (ARG59) (ALA108) [view usage] : e.6.1.0 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
d2d2md_ : (ARG82) (ILE141) [view usage] : a.1.1.0 |Globin-like |Globin-like |automated matches |automated matches |Oligobrachia mashikoi [TaxId: 55676]
d1j2na_ : (GLN26) (LYS77) [view usage] : a.165.1.1 |Myosin phosphatase inhibitor 17kDa protein, CPI-17 |Myosin phosphatase inhibitor 17kDa protein, CPI-17 |Myosin phosphatase inhibitor 17kDa protein, CPI-17 |Myosin phosphatase inhibitor 17kDa protein, CPI-17 |Pig (Sus scrofa) [TaxId: 9823]
d3jwqa_ : (GLU536) (ASN583) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3rrvb_ : (PRO136) (THR167) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium avium [TaxId: 1770]
d3otxb_ : (ASP287) (ARG332) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d1vgpa_ : (SER231) (LEU300) [view usage] : a.103.1.0 |Citrate synthase |Citrate synthase |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 111955]
d2cjea_ : (ASP69) (ALA151) [view usage] : a.204.1.0 |all-alpha NTP pyrophosphatases |all-alpha NTP pyrophosphatases |automated matches |automated matches |Leishmania major [TaxId: 5664]
d3l0lb_ : (CYS345) (ALA409) [view usage] : a.123.1.0 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1t95a2 : (ASN44) (ILE86) [view usage] : d.235.1.2 |FYSH domain |FYSH domain |Hypothetical protein AF0491, N-terminal domain |Hypothetical protein AF0491, N-terminal domain |Archaeoglobus fulgidus [TaxId: 2234]
d1unge_ : (SER170) (TYR236) [view usage] : a.74.1.1 |Cyclin-like |Cyclin-like |Cyclin |CDK5 activator 1 (NCK5a, p25) |Human (Homo sapiens) [TaxId: 9606]
d3l0ob2 : (SER350) (THR410) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d1pv2h_ : (ASN199) (GLY239) [view usage] : c.23.16.2 |Flavodoxin-like |Class I glutamine amidotransferase-like |DJ-1/PfpI |HSP31 (HchA; YedU) |Escherichia coli [TaxId: 562]
d4d08d1 : (ASP597) (ASN627) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4k89a_ : (GLN158) (SER226) [view usage] : d.92.1.2 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Thermolysin-like |Elastase |Pseudomonas aeruginosa [TaxId: 287]
d1zoya3 : (GLU448) (LEU507) [view usage] : a.7.3.1 |Spectrin repeat-like |Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |Succinate dehydogenase |Pig (Sus scrofa) [TaxId: 9823]
d2zfod_ : (ASN81) (ILE141) [view usage] : a.1.1.0 |Globin-like |Globin-like |automated matches |automated matches |Oligobrachia mashikoi [TaxId: 55676]
d1xu0a_ : (ASN143) (SER226) [view usage] : d.6.1.1 |Prion-like |Prion-like |Prion-like |Prion protein domain |African clawed frog (Xenopus laevis) [TaxId: 8355]
d4gvha_ : (GLN69) (ASP112) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Salmonella enterica [TaxId: 99287]
d1vlja_ : (GLU320) (ALA394) [view usage] : e.22.1.2 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Iron-containing alcohol dehydrogenase |NADH-dependent butanol dehydrogenase A (TM0820) |Thermotoga maritima [TaxId: 2336]
d2h42a_ : (GLU535) (ASN583) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |cGMP-specific 3',5'-cyclic phosphodiesterase pde5a1-Ibmx |Human (Homo sapiens) [TaxId: 9606]
d4i15a_ : (THR590) (GLY640) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d1syya_ : (GLY215) (ILE303) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Chlamydia trachomatis [TaxId: 813]
d1ffta_ : (TRP439) (ARG523) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome O ubiquinol oxidase, subunit I |Escherichia coli [TaxId: 562]
d1gxoa_ : (ASN336) (SER406) [view usage] : a.102.5.1 |alpha/alpha toroid |Family 10 polysaccharide lyase |Family 10 polysaccharide lyase |Polygalacturonic acid lyase (pectate lyase) |Cellvibrio cellulosa [TaxId: 155077]
d2prva1 : (MSE1) (GLY51) [view usage] : d.369.1.1 |SMI1/KNR4-like |SMI1/KNR4-like |SMI1/KNR4-like |Uncharacterized protein YobK |Bacillus subtilis [TaxId: 1423]
d1izya_ : (ASN199) (GLY239) [view usage] : c.23.16.2 |Flavodoxin-like |Class I glutamine amidotransferase-like |DJ-1/PfpI |HSP31 (HchA; YedU) |Escherichia coli [TaxId: 562]
d2df4b1 : (VAL348) (LYS396) [view usage] : a.182.1.2 |GatB/YqeY motif |GatB/YqeY motif |GatB/GatE C-terminal domain-like |Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, GatB, C-terminal domain |Staphylococcus aureus [TaxId: 1280]
d3wjaa1 : (GLY25) (PRO55) [view usage] : c.58.1.0 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1hdla_ : (HIS9) (GLN55) [view usage] : g.68.1.2 |Kazal-type serine protease inhibitors |Kazal-type serine protease inhibitors |Serine proteinase inhibitor lekti |Serine proteinase inhibitor lekti |Human (Homo sapiens) [TaxId: 9606]
d1p9qc2 : (ASN38) (GLY83) [view usage] : d.235.1.2 |FYSH domain |FYSH domain |Hypothetical protein AF0491, N-terminal domain |Hypothetical protein AF0491, N-terminal domain |Archaeoglobus fulgidus [TaxId: 2234]
d1ezma_ : (GLN158) (SER239) [view usage] : d.92.1.2 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Thermolysin-like |Elastase |Pseudomonas aeruginosa [TaxId: 287]
d4il6d_ : (SER57) (LEU107) [view usage] : f.26.1.1 |Bacterial photosystem II reaction centre, L and M subunits |Bacterial photosystem II reaction centre, L and M subunits |Bacterial photosystem II reaction centre, L and M subunits |automated matches |Thermosynechococcus vulcanus [TaxId: 32053]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, a.102, d.92, c.14, a.211, e.22, c.72, c.23, c.37, a.103, e.6, f.26, a.123, a.25, f.24, a.1, c.58, a.74, a.124, a.116,
d.6, a.60, a.7, a.204, g.68, d.369, a.165, a.182, d.235