Tableau information
Concept source: d3hi4a_ amino acid (a.a.) range (ARG151)(GLU200)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG151) (GLY164) H1
(GLN173) (LEU184) H2
(SER187) (GLU200) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 136.1° H2
H3 44.7° 100.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2ov9b_ : (VAL27) (ALA97) [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |Hypothetical protein RHA1_ro05818 |Rhodococcus sp. RHA1 [TaxId: 101510]
d3fe2a_ : (ASN95) (GLN123) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3exya_ : (CYS18) (ILE78) [view usage] : d.58.1.1 |Ferredoxin-like |4Fe-4S ferredoxins |Short-chain ferredoxins |automated matches |Allochromatium vinosum [TaxId: 1049]
d1tw8b_ : (GLY72) (ASN98) [view usage] : c.52.1.19 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease HincII |Restriction endonuclease HincII |Haemophilus influenzae [TaxId: 727]
d2v87a_ : (HIS455) (ILE484) [view usage] : g.50.1.2 |FYVE/PHD zinc finger |FYVE/PHD zinc finger |PHD domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1g5ja_ : (SER2) (TYR105) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Apoptosis regulator Bcl-xL |Human (Homo sapiens) [TaxId: 9606]
d1rk4a2 : (SER27) (LEU88) [view usage] : c.47.1.5 |Thioredoxin fold |Thioredoxin-like |Glutathione S-transferase (GST), N-terminal domain |Chloride intracellular channel 1 (clic1) |Human (Homo sapiens) [TaxId: 9606]
d2zu2b_ : (GLU244) (GLY298) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |Human coronavirus 229E [TaxId: 11137]
d1m6na1 : (SER230) (VAL298) [view usage] : a.162.1.1 |Pre-protein crosslinking domain of SecA |Pre-protein crosslinking domain of SecA |Pre-protein crosslinking domain of SecA |Pre-protein crosslinking domain of SecA |Bacillus subtilis [TaxId: 1423]
d2v85b_ : (HIS455) (ILE484) [view usage] : g.50.1.2 |FYVE/PHD zinc finger |FYVE/PHD zinc finger |PHD domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1m33a_ : (ASP135) (LYS184) [view usage] : c.69.1.26 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Biotin biosynthesis protein BioH |Biotin biosynthesis protein BioH |Escherichia coli [TaxId: 562]
d1zm5a_ : (LYS234) (GLY289) [view usage] : d.89.1.5 |Origin of replication-binding domain, RBD-like |Origin of replication-binding domain, RBD-like |Relaxase domain |automated matches |Escherichia coli [TaxId: 562]
d3m3ta_ : (GLY251) (SER301) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |SARS coronavirus [TaxId: 227859]
d2gzfb_ : (PRO106) (HIS131) [view usage] : d.4.1.1 |His-Me finger endonucleases |His-Me finger endonucleases |HNH-motif |DNase domain of colicin E9 |Escherichia coli [TaxId: 562]
d3l2fa1 : (THR63) (HIS110) [view usage] : a.83.1.0 |Guanido kinase N-terminal domain |Guanido kinase N-terminal domain |automated matches |automated matches |Namalycastis sp. [TaxId: 243920]
d1wema_ : (HIS41) (SER71) [view usage] : g.50.1.2 |FYVE/PHD zinc finger |FYVE/PHD zinc finger |PHD domain |Death associated transcription factor 1, Datf1 (DIO-1) |Mouse (Mus musculus) [TaxId: 10090]
d4etwa_ : (PHE136) (LYS184) [view usage] : c.69.1.26 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Biotin biosynthesis protein BioH |automated matches |Shigella flexneri [TaxId: 623]
d2c6fb_ : (PHE207) (PRO272) [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2h5nc_ : (ASP103) (LEU133) [view usage] : a.287.1.2 |TerB-like |TerB-like |PG1108-like |Hypothetical protein PG1108 |Porphyromonas gingivalis [TaxId: 837]
d2q6db_ : (SER249) (VAL304) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Infectious bronchitis virus [TaxId: 11120]
d1lvod_ : (SER248) (GLY298) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |Transmissible gastroenteritis virus [TaxId: 11149]
d1pt5a_ : (TRP277) (ILE305) [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |Hypothetical protein YfdW |Escherichia coli [TaxId: 562]
d2oqmd_ : (VAL63) (ASN109) [view usage] : a.213.1.3 |DinB/YfiT-like putative metalloenzymes |DinB/YfiT-like putative metalloenzymes |Sden0562-like |Hypothetical protein Sden0562 |Shewanella denitrificans [TaxId: 192073]
d3d23c_ : (LEU246) (GLY299) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |Human coronavirus [TaxId: 443239]
d1q0ub_ : (THR4) (ILE34) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Probable DEAD box RNA helicase YqfR |Bacillus stearothermophilus [TaxId: 1422]
d2gu0a1 : (PRO54) (THR104) [view usage] : d.216.1.0 |Rotavirus NSP2 fragment, N-terminal domain |Rotavirus NSP2 fragment, N-terminal domain |automated matches |automated matches |Rotavirus c [TaxId: 10943]
d1s7za_ : (THR6) (SER58) [view usage] : a.159.3.1 |Another 3-helical bundle |B-form DNA mimic Ocr |B-form DNA mimic Ocr |B-form DNA mimic Ocr |Bacteriophage T7 [TaxId: 10760]
d2i5ia1 : (VAL80) (GLY120) [view usage] : c.6.2.8 |7-stranded beta/alpha barrel |Glycoside hydrolase/deacetylase |YdjC-like |Uncharacterized protein EF3048 |Enterococcus faecalis [TaxId: 1351]
d2k3va_ : (ASP46) (ASP80) [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |automated matches |Shewanella frigidimarina [TaxId: 318167]
d2oqma1 : (VAL63) (ALA108) [view usage] : a.213.1.3 |DinB/YfiT-like putative metalloenzymes |DinB/YfiT-like putative metalloenzymes |Sden0562-like |Hypothetical protein Sden0562 |Shewanella denitrificans [TaxId: 192073]
d2jwoa1 : (HIS455) (ILE484) [view usage] : g.50.1.2 |FYVE/PHD zinc finger |FYVE/PHD zinc finger |PHD domain |V(D)J recombination-activating protein 2, Rag2 |Mouse (Mus musculus) [TaxId: 10090]
d2yb0e_ : (ASN171) (ASP223) [view usage] : a.204.1.0 |all-alpha NTP pyrophosphatases |all-alpha NTP pyrophosphatases |automated matches |automated matches |Leishmania major [TaxId: 5664]
d1q6ha_ : (ASN18) (GLU113) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |Peptidyl-prolyl cis-trans isomerase FkpA |Escherichia coli [TaxId: 562]
d1g6ha_ : (PRO91) (LYS121) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |MJ1267 |Methanococcus jannaschii [TaxId: 2190]
d2q6dc_ : (THR250) (ASN299) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Infectious bronchitis virus [TaxId: 11120]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.123, c.69, c.6, d.58, b.47, d.92, c.37, c.47, d.38, c.52, a.138, f.1, a.83, d.89, d.26, d.4, a.204, a.159, a.213, a.162,
a.287, g.50, d.216