Tableau information
Concept source: d3ejzb_ amino acid (a.a.) range (TRP253)(PRO310)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(TRP253) (GLY285) H1
(ASN287) (GLY306) H2
(GLY306) (PRO310) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 136.5° H2
H3 165.0° -39.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2ps4b_ : (PRO197) (SER229) [view usage] : a.128.1.5 |Terpenoid synthases |Terpenoid synthases |Trichodiene synthase |Trichodiene synthase |Fusarium sporotrichioides [TaxId: 5514]
d1mhyb_ : (ASP176) (SER228) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Methane monooxygenase hydrolase beta subunit |Methylosinus trichosporium [TaxId: 426]
d4fa8f_ : (THR109) (GLU145) [view usage] : a.26.1.2 |4-helical cytokines |4-helical cytokines |Short-chain cytokines |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1jrkd_ : (ILE116) (LEU149) [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |Hypothetical protein PAE3301 |Pyrobaculum aerophilum [TaxId: 13773]
d3ucwb_ : (GLU31) (GLY59) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Human (Homo sapiens) [TaxId: 9606]
d2ilka_ : (LYS119) (ILE158) [view usage] : a.26.1.3 |4-helical cytokines |4-helical cytokines |Interferons/interleukin-10 (IL-10) |Interleukin-10 (cytokine synthesis inhibitory factor, CSIF) |Human (Homo sapiens) [TaxId: 9606]
d1y6kl_ : (SER118) (THR155) [view usage] : a.26.1.3 |4-helical cytokines |4-helical cytokines |Interferons/interleukin-10 (IL-10) |Interleukin-10 (cytokine synthesis inhibitory factor, CSIF) |Human (Homo sapiens) [TaxId: 9606]
d4koda3 : (GLY202) (PRO227) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4kode3 : (GLY202) (PRO227) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1j7vl_ : (SER118) (ARG159) [view usage] : a.26.1.3 |4-helical cytokines |4-helical cytokines |Interferons/interleukin-10 (IL-10) |Interleukin-10 (cytokine synthesis inhibitory factor, CSIF) |Human (Homo sapiens) [TaxId: 9606]
d1otva_ : (GLY93) (ARG134) [view usage] : a.132.1.4 |Heme oxygenase-like |Heme oxygenase-like |PqqC-like |Coenzyme PQQ synthesis protein C, PqqC |Klebsiella pneumoniae [TaxId: 573]
d1vs5c2 : (ASP111) (GLY144) [view usage] : d.53.1.1 |Ribosomal protein S3 C-terminal domain |Ribosomal protein S3 C-terminal domain |Ribosomal protein S3 C-terminal domain |Ribosomal protein S3 C-terminal domain |Escherichia coli [TaxId: 562]
d1xpja_ : (ASN50) (GLN77) [view usage] : c.108.1.18 |HAD-like |HAD-like |Hypothetical protein VC0232 |Hypothetical protein VC0232 |Vibrio cholerae [TaxId: 666]
d4loja_ : (PRO263) (VAL301) [view usage] : d.387.1.1 |STING C-terminal-like |STING, TM173 CTD-like |Tyrosinase cofactor MelC1 |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2igsg_ : (GLN12) (HIS47) [view usage] : d.2.1.11 |Lysozyme-like |Lysozyme-like |PA2222-like |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d1tugc1 : (GLN231) (VAL248) [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Escherichia coli [TaxId: 562]
d1v15d_ : (PRO106) (ILE119) [view usage] : d.4.1.1 |His-Me finger endonucleases |His-Me finger endonucleases |HNH-motif |DNase domain of colicin E9 |Escherichia coli [TaxId: 562]
d7ceib_ : (PRO548) (ILE561) [view usage] : d.4.1.1 |His-Me finger endonucleases |His-Me finger endonucleases |HNH-motif |DNase domain of colicin E7 |Escherichia coli [TaxId: 562]
d2igsc_ : (GLN12) (HIS47) [view usage] : d.2.1.11 |Lysozyme-like |Lysozyme-like |PA2222-like |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d3ejjb_ : (PRO110) (LYS145) [view usage] : a.26.1.2 |4-helical cytokines |4-helical cytokines |Short-chain cytokines |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1wp1a_ : (GLY39) (PRO86) [view usage] : f.5.1.1 |Outer membrane efflux proteins (OEP) |Outer membrane efflux proteins (OEP) |Outer membrane efflux proteins (OEP) |Outer membrane protein OprM |Pseudomonas aeruginosa [TaxId: 287]
d4bcea_ : (GLU164) (GLY210) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d3uf2c_ : (PRO110) (GLU145) [view usage] : a.26.1.2 |4-helical cytokines |4-helical cytokines |Short-chain cytokines |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1jk0a_ : (PRO163) (TRP220) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Baker's yeast (Saccharomyces cerevisiae), Y2 [TaxId: 4932]
d3uf2g_ : (THR109) (GLU145) [view usage] : a.26.1.2 |4-helical cytokines |4-helical cytokines |Short-chain cytokines |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4fyqa2 : (TRP403) (LEU449) [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ijca1 : (ALA49) (LEU98) [view usage] : a.152.1.3 |AhpD-like |AhpD-like |Atu0492-like |Hypothetical protein PA0269 |Pseudomonas aeruginosa [TaxId: 287]
d3ejja_ : (THR109) (LYS145) [view usage] : a.26.1.2 |4-helical cytokines |4-helical cytokines |Short-chain cytokines |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1otwb_ : (GLY92) (ARG134) [view usage] : a.132.1.4 |Heme oxygenase-like |Heme oxygenase-like |PqqC-like |Coenzyme PQQ synthesis protein C, PqqC |Klebsiella pneumoniae [TaxId: 573]
d3ftba_ : (GLU184) (SER205) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Clostridium acetobutylicum [TaxId: 1488]
d2gqra_ : (GLU134) (GLY170) [view usage] : d.143.1.0 |SAICAR synthase-like |SAICAR synthase-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1ilka_ : (LYS119) (ILE158) [view usage] : a.26.1.3 |4-helical cytokines |4-helical cytokines |Interferons/interleukin-10 (IL-10) |Interleukin-10 (cytokine synthesis inhibitory factor, CSIF) |Human (Homo sapiens) [TaxId: 9606]
d4fisa_ : (ASP29) (ARG71) [view usage] : a.4.1.12 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |FIS-like |FIS protein |Escherichia coli [TaxId: 562]
d1y6nl1 : (LYS119) (ILE156) [view usage] : a.26.1.3 |4-helical cytokines |4-helical cytokines |Interferons/interleukin-10 (IL-10) |Interleukin-10 (cytokine synthesis inhibitory factor, CSIF) |Epstein-Barr virus [TaxId: 10376]
d1a59a_ : (ALA190) (ILE235) [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |Citrate synthase |Antarctic bacterium DS2-3R [TaxId: 56673]
d4fa8e_ : (THR109) (GLU145) [view usage] : a.26.1.2 |4-helical cytokines |4-helical cytokines |Short-chain cytokines |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1rqja_ : (ALA75) (LEU107) [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |Farnesyl diphosphate synthase (geranyltranstransferase) |Escherichia coli [TaxId: 562]
d4ejgd_ : (PHE267) (HIS320) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1r5za_ : (LEU161) (GLY236) [view usage] : f.40.1.1 |V-type ATP synthase subunit C |V-type ATP synthase subunit C |V-type ATP synthase subunit C |V-type ATP synthase subunit C |Thermus thermophilus [TaxId: 274]
d1m4ra_ : (ASP138) (ILE179) [view usage] : a.26.1.3 |4-helical cytokines |4-helical cytokines |Interferons/interleukin-10 (IL-10) |Interleukin-22 (IL-22) |Human (Homo sapiens) [TaxId: 9606]
d1xcja_ : (ASN169) (ALA199) [view usage] : c.66.1.16 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Guanidinoacetate methyltransferase |Guanidinoacetate methyltransferase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1xpjb_ : (ASN50) (GLN77) [view usage] : c.108.1.18 |HAD-like |HAD-like |Hypothetical protein VC0232 |Hypothetical protein VC0232 |Vibrio cholerae [TaxId: 666]
d1vlka_ : (LYS119) (LYS157) [view usage] : a.26.1.3 |4-helical cytokines |4-helical cytokines |Interferons/interleukin-10 (IL-10) |Interleukin-10 (cytokine synthesis inhibitory factor, CSIF) |Epstein-Barr virus [TaxId: 10376]
d3dgcl_ : (LEU139) (ILE179) [view usage] : a.26.1.3 |4-helical cytokines |4-helical cytokines |Interferons/interleukin-10 (IL-10) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1fx8a_ : (PHE208) (LEU259) [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |Glycerol uptake facilitator protein GlpF |Escherichia coli [TaxId: 562]
d1m08a_ : (PRO548) (ILE561) [view usage] : d.4.1.1 |His-Me finger endonucleases |His-Me finger endonucleases |HNH-motif |DNase domain of colicin E7 |Escherichia coli [TaxId: 562]
d1al6a_ : (VAL243) (LEU288) [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |Citrate synthase |Chicken (Gallus gallus) [TaxId: 9031]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.67, a.104, c.108, a.128, c.66, d.92, f.20, c.37, a.103, d.2, a.132, c.78, d.143, a.25, a.152, a.4, a.39, f.19, d.113,
a.26, d.4, d.387, f.40, f.5, d.53