Tableau information
Concept source: d1e55a_ amino acid (a.a.) range (ALA42)(GLY91)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA42) (GLY47) H1
(SER51) (TYR80) H2
(TYR80) (GLY91) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 66.2° H2
H3 -119.0° -69.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2fw2e_ : (ARG218) (GLU254) [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Chromodomain protein CDY2A |Human (Homo sapiens) [TaxId: 9606]
d3vqsb_ : (LEU165) (GLY192) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Hepatitis C virus [TaxId: 11103]
d2o36a_ : (GLU250) (LYS286) [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |Neurolysin (endopeptidase 24.16, thimet oligopeptidase) |Human (Homo sapiens) [TaxId: 9606]
d1wq4a_ : (ASN134) (ARG163) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Tyrosyl-tRNA synthetase (TyrRS) |Escherichia coli [TaxId: 316407]
d2ht5a_ : (ASP142) (ARG156) [view usage] : b.68.1.0 |6-bladed beta-propeller |Sialidases |automated matches |automated matches |Influenza A virus [TaxId: 11320]
d1hvqa_ : (LYS257) (VAL273) [view usage] : c.1.8.5 |TIM beta/alpha-barrel |(Trans)glycosidases |Type II chitinase |Hevamine A (chitinase/lysozyme) |Rubber tree (Hevea brasiliensis) [TaxId: 3981]
d1rp4a_ : (GLY54) (PHE82) [view usage] : a.227.1.1 |ERO1-like |ERO1-like |ERO1-like |Endoplasmic oxidoreductin 1, Ero1p |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1u67a1 : (TRP75) (THR106) [view usage] : a.93.1.2 |Heme-dependent peroxidases |Heme-dependent peroxidases |Myeloperoxidase-like |Prostaglandin H2 synthase |Sheep (Ovis aries) [TaxId: 9940]
d1wq3a_ : (ASN134) (ASN162) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Tyrosyl-tRNA synthetase (TyrRS) |Escherichia coli [TaxId: 316407]
d1zt4c2 : (LEU139) (LYS183) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |CD1, alpha-1 and alpha-2 domains |Human (Homo sapiens), CD1a [TaxId: 9606]
d4h25b1 : (ARG55) (GLN92) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2a2od_ : (ALA34) (ALA64) [view usage] : a.132.1.3 |Heme oxygenase-like |Heme oxygenase-like |TENA/THI-4 |Hypothetical protein BT3146 |Bacteroides thetaiotaomicron [TaxId: 818]
d2fw2b_ : (ARG218) (ASN255) [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Chromodomain protein CDY2A |Human (Homo sapiens) [TaxId: 9606]
d1suva_ : (TYR123) (ARG155) [view usage] : i.21.1.1 |Transferrin receptor-transferrin complex |Transferrin receptor-transferrin complex |Transferrin receptor-transferrin complex |Transferrin receptor-transferrin complex |Human (Homo sapiens) [TaxId: 9606]
d1euga_ : (THR6) (SER33) [view usage] : c.18.1.1 |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase |Uracil-DNA glycosylase |Escherichia coli [TaxId: 562]
d2wnha_ : (PRO143) (VAL175) [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d2wu8a_ : (THR61) (LEU105) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d1wwrb_ : (GLY107) (ASN122) [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |tRNA adenosine deaminase TadA |Aquifex aeolicus [TaxId: 63363]
d4mjua_ : (ASP142) (ARG156) [view usage] : b.68.1.0 |6-bladed beta-propeller |Sialidases |automated matches |automated matches |Influenza a virus [TaxId: 385580]
d1sb0a_ : (TRP6) (ASP37) [view usage] : a.12.1.1 |Kix domain of CBP (creb binding protein) |Kix domain of CBP (creb binding protein) |Kix domain of CBP (creb binding protein) |Kix domain of CBP (creb binding protein) |Mouse (Mus musculus) [TaxId: 10090]
d3d31c1 : (PHE16) (LEU78) [view usage] : f.58.1.1 |MetI-like |MetI-like |MetI-like |Sulfate/molybdate ABC transporter, permease protein |Methanosarcina acetivorans [TaxId: 2214]
d2hq8a_ : (THR5) (GLY69) [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Renilla muelleri [TaxId: 37510]
d1ddxa1 : (PHE74) (ILE105) [view usage] : a.93.1.2 |Heme-dependent peroxidases |Heme-dependent peroxidases |Myeloperoxidase-like |Prostaglandin H2 synthase |Mouse (Mus musculus) [TaxId: 10090]
d2vv6a_ : (GLU194) (GLY219) [view usage] : d.110.3.2 |Profilin-like |PYP-like sensor domain (PAS domain) |Heme-binding PAS domain |Histidine kinase FixL heme domain |Bradyrhizobium japonicum [TaxId: 375]
d2z9aa_ : (PRO40) (HIS76) [view usage] : a.64.1.1 |Saposin-like |Saposin |NKL-like |Saposin C |Human (Homo sapiens) [TaxId: 9606]
d1sg4b_ : (ARG217) (GLY260) [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) |Human (Homo sapiens) [TaxId: 9606]
d2ij5a_ : (SER61) (GLY93) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cyp121 monooxygenase (P450 Mt2) |Mycobacterium tuberculosis [TaxId: 1773]
d3snga_ : (GLU187) (LEU221) [view usage] : a.124.1.0 |Phospholipase C/P1 nuclease |Phospholipase C/P1 nuclease |automated matches |automated matches |Solanum lycopersicum [TaxId: 4081]
d1by1a_ : (MET99) (THR130) [view usage] : a.87.1.1 |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |beta-pix |Human (Homo sapiens) [TaxId: 9606]
d3s9ya_ : (ASN196) (ASN234) [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Plasmodium falciparum [TaxId: 36329]
d1om0a_ : (ARG258) (ALA274) [view usage] : c.1.8.5 |TIM beta/alpha-barrel |(Trans)glycosidases |Type II chitinase |Xylanase inhibitor protein I, XIP-I |Wheat (Triticum aestivum) [TaxId: 4565]
d2wnia_ : (PRO143) (VAL175) [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d1k2db2 : (ASP57) (ARG92) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Mouse (Mus musculus), I-AU [TaxId: 10090]
d1diog_ : (HIS49) (ASN72) [view usage] : a.23.2.1 |Open three-helical up-and-down bundle |Diol dehydratase, gamma subunit |Diol dehydratase, gamma subunit |Diol dehydratase, gamma subunit |Klebsiella oxytoca [TaxId: 571]
d1cx2a1 : (PHE74) (PRO106) [view usage] : a.93.1.2 |Heme-dependent peroxidases |Heme-dependent peroxidases |Myeloperoxidase-like |Prostaglandin H2 synthase |Mouse (Mus musculus) [TaxId: 10090]
d1cqea1 : (ILE74) (THR106) [view usage] : a.93.1.2 |Heme-dependent peroxidases |Heme-dependent peroxidases |Myeloperoxidase-like |Prostaglandin H2 synthase |Sheep (Ovis aries) [TaxId: 9940]
d4lc3a_ : (THR236) (GLY277) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d1dbtb_ : (SER126) (ALA166) [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) |Bacillus subtilis [TaxId: 1423]
d3b9na_ : (SER141) (HIS197) [view usage] : c.1.16.0 |TIM beta/alpha-barrel |Bacterial luciferase-like |automated matches |automated matches |Geobacillus thermodenitrificans [TaxId: 33940]
d1rsva_ : (MET296) (TRP338) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Escherichia coli [TaxId: 562]
d1x8xa_ : (ASN134) (ASN162) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |automated matches |Escherichia coli [TaxId: 562]
d4qxra_ : (SER154) (ARG191) [view usage] : d.387.1.1 |STING C-terminal-like |STING, TM173 CTD-like |Tyrosinase cofactor MelC1 |Tyrosinase cofactor MelC1 |Human (Homo sapiens) [TaxId: 9606]
d2lkva_ : (TYR115) (ASP143) [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
d1vbna_ : (ASN134) (ARG163) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |automated matches |Escherichia coli [TaxId: 562]
d1cnsa_ : (SER1) (THR30) [view usage] : d.2.1.1 |Lysozyme-like |Lysozyme-like |Family 19 glycosidase |Plant class II chitinase |Barley (Hordeum vulgare) [TaxId: 4513]
d1prha1 : (ILE74) (THR106) [view usage] : a.93.1.2 |Heme-dependent peroxidases |Heme-dependent peroxidases |Myeloperoxidase-like |Prostaglandin H2 synthase |Sheep (Ovis aries) [TaxId: 9940]
d4m3ma_ : (ASP142) (ARG156) [view usage] : b.68.1.0 |6-bladed beta-propeller |Sialidases |automated matches |automated matches |Influenza a virus [TaxId: 385580]
d1tlqa_ : (THR7) (PRO42) [view usage] : a.195.1.1 |YutG-like |YutG-like |YutG-like |Hypothetical protein YpjQ |Bacillus subtilis [TaxId: 1423]
d2qypb_ : (PRO40) (HIS76) [view usage] : a.64.1.1 |Saposin-like |Saposin |NKL-like |Saposin C |Human (Homo sapiens) [TaxId: 9606]
d2pqea_ : (LYS116) (ASN144) [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
d2a2ma1 : (ALA34) (ALA64) [view usage] : a.132.1.3 |Heme oxygenase-like |Heme oxygenase-like |TENA/THI-4 |Hypothetical protein BT3146 |Bacteroides thetaiotaomicron [TaxId: 818]
d2wnib_ : (PRO143) (VAL175) [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d2ij5d_ : (SER61) (GLY93) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cyp121 monooxygenase (P450 Mt2) |Mycobacterium tuberculosis [TaxId: 1773]
d3ldva_ : (ALA125) (ALA162) [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Vibrio cholerae [TaxId: 243277]
d2wnhb_ : (PRO143) (VAL175) [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, e.8, c.1, c.67, a.104, c.26, c.80, d.92, c.14, a.93, b.40, c.18, d.2, c.60, a.132, c.97, d.110, a.25, d.19, a.39,
i.21, a.23, a.87, a.124, f.58, a.64, d.387, a.12, a.227, a.195