Tableau information
Concept source: d1z2ba2 amino acid (a.a.) range (THR381)(GLU434)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR381) (ALA400) H1
(HIS406) (GLY412) H2
(GLY416) (GLU434) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -84.8° H2
H3 -152.6° 119.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1sa0a2 : (THR381) (GLU434) [view usage] : d.79.2.1 |Bacillus chorismate mutase-like |Tubulin C-terminal domain-like |Tubulin, C-terminal domain |Tubulin alpha-subunit |Cow (Bos taurus) [TaxId: 9913]
d1jjua1 : (THR2) (GLY68) [view usage] : a.3.1.7 |Cytochrome c |Cytochrome c |Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 |Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 |Paracoccus denitrificans [TaxId: 266]
d1v15b_ : (GLY19) (ASP64) [view usage] : d.4.1.1 |His-Me finger endonucleases |His-Me finger endonucleases |HNH-motif |DNase domain of colicin E9 |Escherichia coli [TaxId: 562]
d1z2ba2 : (THR381) (GLU434) [view usage] : d.79.2.1 |Bacillus chorismate mutase-like |Tubulin C-terminal domain-like |Tubulin, C-terminal domain |Tubulin alpha-subunit |Cow (Bos taurus) [TaxId: 9913]
d1oizb1 : (GLY11) (ASP60) [view usage] : a.5.3.1 |RuvA C-terminal domain-like |CRAL/TRIO N-terminal domain |CRAL/TRIO N-terminal domain |Alpha-tocopherol transfer protein |Human (Homo sapiens) [TaxId: 9606]
d3g0ma_ : (THR93) (THR136) [view usage] : d.224.1.1 |SufE/NifU |SufE/NifU |SufE-like |automated matches |Salmonella typhimurium [TaxId: 99287]
d2jo0a_ : (GLU36) (ALA73) [view usage] : a.28.3.1 |Acyl carrier protein-like |Retrovirus capsid dimerization domain-like |Retrovirus capsid protein C-terminal domain |HIV capsid protein, dimerisation domain |Human immunodeficiency virus type 1 [TaxId: 11676]
d1iola_ : (ALA191) (ALA230) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Human estrogenic 17beta-hydroxysteroid dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
d2g7ga2 : (PRO128) (GLY205) [view usage] : a.121.1.1 |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Putative transcriptional regulator Rha04620 |Rhodococcus sp. RHA1 [TaxId: 101510]
d4ppya_ : (ASP190) (ARG235) [view usage] : c.23.10.0 |Flavodoxin-like |SGNH hydrolase |automated matches |automated matches |Bacteroides fragilis [TaxId: 272559]
d1kf6b1 : (SER197) (LYS241) [view usage] : a.1.2.1 |Globin-like |alpha-helical ferredoxin |Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain |Fumarate reductase |Escherichia coli [TaxId: 562]
d1v14b_ : (GLY19) (ASP64) [view usage] : d.4.1.1 |His-Me finger endonucleases |His-Me finger endonucleases |HNH-motif |DNase domain of colicin E9 |Escherichia coli [TaxId: 562]
d1n4pb_ : (ARG22) (ASP62) [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2bxba1 : (ALA306) (HIS338) [view usage] : a.126.1.1 |Serum albumin-like |Serum albumin-like |Serum albumin-like |Serum albumin |Human (Homo sapiens) [TaxId: 9606]
d1fsjb_ : (TRP22) (ASP64) [view usage] : d.4.1.1 |His-Me finger endonucleases |His-Me finger endonucleases |HNH-motif |DNase domain of colicin E9 |Escherichia coli [TaxId: 562]
d4k4xa_ : (LYS96) (LEU131) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Human coxsackievirus B3 [TaxId: 12072]
d1tbha1 : (ASP183) (TYR218) [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Arginase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1du5a_ : (ASP127) (CYS177) [view usage] : b.25.1.1 |Osmotin, thaumatin-like protein |Osmotin, thaumatin-like protein |Osmotin, thaumatin-like protein |Zeamatin |Maize (Zea mays) [TaxId: 4577]
d3u43b_ : (TRP22) (ASP64) [view usage] : d.4.1.1 |His-Me finger endonucleases |His-Me finger endonucleases |HNH-motif |automated matches |Escherichia coli [TaxId: 562]
d4ppyb_ : (ASP190) (ARG235) [view usage] : c.23.10.0 |Flavodoxin-like |SGNH hydrolase |automated matches |automated matches |Bacteroides fragilis [TaxId: 272559]
d1cpoa1 : (GLY7) (GLY62) [view usage] : a.39.3.1 |EF Hand-like |Cloroperoxidase |Cloroperoxidase |Cloroperoxidase |Fungus (Caldariomyces fumago) [TaxId: 5474]
d1wjra_ : (GLY70) (PRO109) [view usage] : b.34.9.3 |SH3-like barrel |Tudor/PWWP/MBT |MBT repeat |Scm-like with four MBT domains protein 2, SFMBT2 (KIAA1617) |Human (Homo sapiens) [TaxId: 9606]
d1g1ub_ : (SER317) (GLN361) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Retinoid-X receptor alpha (RXR-alpha) |Human (Homo sapiens) [TaxId: 9606]
d3cdua_ : (LYS96) (LEU131) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Coxsackievirus b3 [TaxId: 103903]
d4k8va1 : (PRO319) (GLU343) [view usage] : d.218.1.15 |Nucleotidyltransferase |Nucleotidyltransferase |cGAMP synthase, cGAS N-terminal domain |cGAMP synthase, cGAS N-terminal domain |Mouse (Mus musculus) [TaxId: 10090]
d1itwc_ : (ASN694) (ALA738) [view usage] : c.77.1.2 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Monomeric isocitrate dehydrogenase |Monomeric isocitrate dehydrogenase |Azotobacter vinelandii [TaxId: 354]
d2d6ya2 : (ALA143) (ILE189) [view usage] : a.121.1.1 |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Putative regulator SCO4008 |Streptomyces coelicolor [TaxId: 1902]
d3lhrb_ : (PRO5) (HIS43) [view usage] : a.28.3.0 |Acyl carrier protein-like |Retrovirus capsid dimerization domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3ppha1 : (GLN68) (GLY98) [view usage] : c.1.22.0 |TIM beta/alpha-barrel |UROD/MetE-like |automated matches |automated matches |Yeast (Candida albicans) [TaxId: 5476]
d2kq3a_ : (VAL99) (LYS136) [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |automated matches |Staphylococcus aureus [TaxId: 1280]
d1mzga_ : (THR93) (SER138) [view usage] : d.224.1.1 |SufE/NifU |SufE/NifU |SufE-like |SufE (YhnA) |Escherichia coli [TaxId: 562]
d2edia_ : (LEU128) (ARG164) [view usage] : d.20.1.0 |UBC-like |UBC-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3ddka_ : (LYS96) (LEU131) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Human coxsackievirus [TaxId: 12072]
d1g8jc2 : (THR305) (THR341) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Arsenite oxidase large subunit |Alcaligenes faecalis [TaxId: 511]
d4jlza1 : (PRO308) (ARG331) [view usage] : d.218.1.15 |Nucleotidyltransferase |Nucleotidyltransferase |cGAMP synthase, cGAS N-terminal domain |cGAMP synthase, cGAS N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d1rjfa_ : (ASP9) (PHE55) [view usage] : c.66.1.37 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Leucine carboxy methyltransferase Ppm1 |Leucine carboxy methyltransferase Ppm1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3hi6a_ : (PRO281) (LYS304) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4jlxa2 : (LEU437) (ASN491) [view usage] : a.160.1.6 |PAP/OAS1 substrate-binding domain |PAP/OAS1 substrate-binding domain |cGAMP synthase, cGAS C-terminal domain |cGAMP synthase, cGAS C-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d1pprm2 : (LYS263) (GLN312) [view usage] : a.131.1.1 |Peridinin-chlorophyll protein |Peridinin-chlorophyll protein |Peridinin-chlorophyll protein |Peridinin-chlorophyll protein |Dinoflagellate (Amphidinium carterae) [TaxId: 2961]
d2f7ee_ : (SER262) (HIS294) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |cAMP-dependent PK, catalytic subunit |Cow (Bos taurus) [TaxId: 9913]
d2ehok1 : (TYR91) (GLN139) [view usage] : a.278.1.2 |GINS helical bundle-like |GINS helical bundle-like |PSF2 C-terminal domain-like |DNA replication complex GINS protein PSF2 |Human (Homo sapiens) [TaxId: 9606]
d1sa1a2 : (THR381) (GLU434) [view usage] : d.79.2.1 |Bacillus chorismate mutase-like |Tubulin C-terminal domain-like |Tubulin, C-terminal domain |Tubulin alpha-subunit |Cow (Bos taurus) [TaxId: 9913]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.1, c.81, c.2, a.102, c.66, c.77, c.42, c.23, d.144, b.40, c.62, a.123, d.20, a.126, d.79, b.25, a.1, b.34, a.39,
a.3, a.160, d.218, d.4, d.224, a.28, a.278, a.121, a.5, a.131