Tableau information
Concept source: d3h49a_ amino acid (a.a.) range (ASN113)(GLN133)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN113) (LEU121) H1
(ASN122) (ASP127) H2
(ASP127) (GLN133) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -49.1° H2
H3 -51.4° 43.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2qpea_ : (ASN127) (ASN174) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial ba3 type cytochrome c oxidase subunit I |Thermus thermophilus [TaxId: 274]
d1mosa_ : (MET252) (SER272) [view usage] : c.80.1.1 |SIS domain |SIS domain |double-SIS domain |"Isomerase domain" of glucosamine 6-phosphate synthase (GLMS) |Escherichia coli [TaxId: 562]
d3exfb1 : (THR82) (GLY105) [view usage] : c.36.1.7 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase Pyr module |E1-beta subunit of pyruvate dehydrogenase, Pyr module |Human (Homo sapiens) [TaxId: 9606]
d3kkeb_ : (ASN73) (SER91) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d1h6ha_ : (PRO120) (GLN142) [view usage] : d.189.1.1 |PX domain |PX domain |PX domain |p40phox NADPH oxidase |Human (Homo sapiens) [TaxId: 9606]
d2v4ma_ : (SER341) (TYR367) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3rgwl_ : (ASN580) (THR602) [view usage] : e.18.1.0 |HydB/Nqo4-like |HydB/Nqo4-like |automated matches |automated matches |Ralstonia eutropha [TaxId: 381666]
d3wccc_ : (VAL187) (GLU218) [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 353153]
d4ajmd_ : (THR452) (LEU474) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1kjva2 : (MET52) (ASN86) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class I MHC, alpha-1 and alpha-2 domains |Norway rat (Rattus norvegicus), RT1-AA [TaxId: 10116]
d1g87a1 : (ASN415) (HIS439) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Endo/exocellulase:cellobiose E-4, N-terminal domain |Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]
d1mioa_ : (GLY492) (ALA522) [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, alpha chain |Clostridium pasteurianum [TaxId: 1501]
d3sn7a_ : (THR442) (LEU464) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ousa_ : (THR452) (LEU474) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1q2la2 : (LYS847) (GLY883) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Protease III |Escherichia coli [TaxId: 562]
d3oojf2 : (HIS250) (SER272) [view usage] : c.80.1.1 |SIS domain |SIS domain |double-SIS domain |automated matches |Escherichia coli [TaxId: 562]
d1ag9a_ : (GLN149) (ASN175) [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Flavodoxin |Escherichia coli [TaxId: 562]
d4doda_ : (ASN438) (LEU462) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |CelA cellulase |Caldicellulosiruptor bescii [TaxId: 31899]
d3om3c_ : (GLN403) (SER444) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |automated matches |Rhodobacter sphaeroides [TaxId: 272943]
d4uaxa_ : (THR48) (VAL93) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d4ajma_ : (THR452) (LEU474) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3dhwa1 : (MET6) (THR41) [view usage] : f.58.1.1 |MetI-like |MetI-like |MetI-like |D-methionine transport system permease protein MetI |Escherichia coli [TaxId: 562]
d4nmjf_ : (TRP154) (GLY172) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pyrobaculum sp. [TaxId: 1104324]
d2wk5a2 : (HIS283) (GLY318) [view usage] : c.27.1.1 |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ouna_ : (THR452) (LEU474) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3g68b_ : (THR2) (THR31) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d2me8a_ : (GLN163) (ASN200) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Apoptosis regulator Bcl-xL |Human (Homo sapiens) [TaxId: 9606]
d2df4a1 : (GLY412) (GLY435) [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Glutamyl-tRNA(Gln) amidotransferase subunit A |Staphylococcus aureus [TaxId: 1280]
d4gbpa_ : (ARG180) (GLU203) [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |Glycosyltransferase A catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d1qoza_ : (PRO184) (GLN205) [view usage] : c.69.1.30 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Cutinase-like |Acetylxylan esterase |Trichoderma reesei [TaxId: 51453]
d1k8ib2 : (GLN64) (HIS91) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Mouse (Mus musculus), H2-DM [TaxId: 10090]
d3cx5c2 : (TYR224) (PRO259) [view usage] : f.21.1.2 |Heme-binding four-helical bundle |Transmembrane di-heme cytochromes |Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |automated matches |Saccharomyces cerevisiae [TaxId: 764097]
d1s48a_ : (GLU291) (VAL311) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Bovine viral diarrhea virus [TaxId: 11099]
d1f24a_ : (THR106) (GLY132) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450-NOR, nitric reductase |Fungus (Fusarium oxysporum) [TaxId: 5507]
d2xfga_ : (ASN418) (LEU442) [view usage] : a.102.1.0 |alpha/alpha toroid |Six-hairpin glycosidases |automated matches |automated matches |Clostridium thermocellum [TaxId: 1515]
d2jj7b2 : (ILE118) (GLY140) [view usage] : a.121.1.1 |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |automated matches |Bacillus cereus [TaxId: 1396]
d1u8va1 : (ALA449) (GLN473) [view usage] : a.29.3.1 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |Medium chain acyl-CoA dehydrogenase-like, C-terminal domain |4-hydroxybutyryl-CoA dehydratase AbfD, C-terminal domain |Clostridium aminobutyricum [TaxId: 33953]
d3r9sa_ : (VAL222) (LYS255) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium avium [TaxId: 243243]
d1ga2a1 : (ASN415) (HIS439) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Endo/exocellulase:cellobiose E-4, N-terminal domain |Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]
d1g87b1 : (ASN415) (HIS439) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Endo/exocellulase:cellobiose E-4, N-terminal domain |Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]
d1wgza_ : (SER301) (VAL333) [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d3r7da2 : (SER219) (MET240) [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d4e3ya_ : (ASN1066) (LYS1084) [view usage] : d.4.1.2 |His-Me finger endonucleases |His-Me finger endonucleases |DNA/RNA non-specific endonuclease |Sm endonuclease |Serratia marcescens [TaxId: 615]
d2wmza_ : (ASN2) (LEU39) [view usage] : f.5.1.1 |Outer membrane efflux proteins (OEP) |Outer membrane efflux proteins (OEP) |Outer membrane efflux proteins (OEP) |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2j6ha1 : (HIS250) (SER272) [view usage] : c.80.1.1 |SIS domain |SIS domain |double-SIS domain |automated matches |Escherichia coli [TaxId: 562]
d1moqa_ : (HIS250) (SER272) [view usage] : c.80.1.1 |SIS domain |SIS domain |double-SIS domain |"Isomerase domain" of glucosamine 6-phosphate synthase (GLMS) |Escherichia coli [TaxId: 562]
d2ouqa_ : (THR452) (LEU474) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2d09a_ : (VAL108) (ALA138) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Streptomyces coelicolor [TaxId: 100226]
d2c3na2 : (ASP88) (GLY125) [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1yrqh_ : (SER420) (ASP453) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |automated matches |Desulfovibrio fructosovorans [TaxId: 878]
d4jgga_ : (ALA161) (LEU180) [view usage] : c.23.10.0 |Flavodoxin-like |SGNH hydrolase |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d3in1a_ : (GLY116) (GLN133) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1vsaf1 : (GLU58) (SER80) [view usage] : d.141.1.1 |Ribosomal protein L6 |Ribosomal protein L6 |Ribosomal protein L6 |Ribosomal protein L6 |Thermus thermophilus [TaxId: 274]
d1s4fa_ : (GLN407) (ALA441) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Bovine viral diarrhea virus [TaxId: 11099]
d2i0ba_ : (ARG228) (CYS257) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3d0ga_ : (SER218) (GLY286) [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |Angiotensin converting enzyme 2, ACE2 |Paguma larvata
d1qaea_ : (ASN66) (LYS84) [view usage] : d.4.1.2 |His-Me finger endonucleases |His-Me finger endonucleases |DNA/RNA non-specific endonuclease |Sm endonuclease |Serratia marcescens [TaxId: 615]
d3h49a_ : (ASN113) (GLN133) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4iucl_ : (ASN580) (THR602) [view usage] : e.18.1.0 |HydB/Nqo4-like |HydB/Nqo4-like |automated matches |automated matches |Ralstonia eutropha [TaxId: 381666]
d4aela_ : (THR452) (LEU474) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1c0ma2 : (PRO181) (PRO215) [view usage] : c.55.3.2 |Ribonuclease H-like motif |Ribonuclease H-like |Retroviral integrase, catalytic domain |Retroviral integrase, catalytic domain |Rous sarcoma virus RSV [TaxId: 11886]
d2vf4x_ : (HIS250) (GLY274) [view usage] : c.80.1.1 |SIS domain |SIS domain |double-SIS domain |automated matches |Escherichia coli [TaxId: 562]
d3qjqa_ : (ASN127) (ASN174) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial ba3 type cytochrome c oxidase subunit I |Thermus thermophilus [TaxId: 274]
d3wu2a_ : (TRP142) (GLU189) [view usage] : f.26.1.1 |Bacterial photosystem II reaction centre, L and M subunits |Bacterial photosystem II reaction centre, L and M subunits |Bacterial photosystem II reaction centre, L and M subunits |automated matches |Thermosynechococcus vulcanus [TaxId: 32053]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.69, c.94, a.104, c.68, c.82, a.128, c.92, c.117, a.102, c.80, d.92, c.93, c.14, a.211, e.18, c.72, c.23, c.36, d.185,
c.55, f.26, c.78, d.19, f.21, f.24, a.45, a.29, f.1, d.4, c.27, f.58, a.121, d.189, f.5, d.141