Tableau information
Concept source: d3dbia_ amino acid (a.a.) range (SER193)(GLY240)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER193) (GLY211) H1
(ASN215) (ALA220) H2
(THR225) (GLY240) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 149.2° H2
H3 -36.4° 149.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3gw9a_ : (PHE142) (LEU192) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d1mmfa_ : (THR405) (PRO450) [view usage] : c.1.19.3 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Diol dehydratase, alpha subunit |Diol dehydratase, alpha subunit |Klebsiella pneumoniae [TaxId: 573]
d2o9da_ : (SER125) (ILE176) [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |Aquaporin Z |Escherichia coli [TaxId: 562]
d2i89d_ : (GLU44) (MET70) [view usage] : d.120.1.1 |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5 |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1frfl_ : (GLY51) (LYS92) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |Nickel-iron hydrogenase, large subunit |Desulfovibrio fructosovorans [TaxId: 878]
d2qvra_ : (THR3) (ASP81) [view usage] : e.7.1.0 |Carbohydrate phosphatase |Carbohydrate phosphatase |automated matches |automated matches |Escherichia coli [TaxId: 562]
d2m33a_ : (GLU48) (LEU75) [view usage] : d.120.1.1 |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5 |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d6cscb_ : (SER122) (LYS181) [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |Citrate synthase |Chicken (Gallus gallus) [TaxId: 9031]
d3nerb_ : (GLU44) (TYR75) [view usage] : d.120.1.1 |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5 |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1rp4a_ : (LYS194) (ARG260) [view usage] : a.227.1.1 |ERO1-like |ERO1-like |ERO1-like |Endoplasmic oxidoreductin 1, Ero1p |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1nuza_ : (THR1012) (SER1088) [view usage] : e.7.1.1 |Carbohydrate phosphatase |Carbohydrate phosphatase |Inositol monophosphatase/fructose-1,6-bisphosphatase-like |Fructose-1,6-bisphosphatase |Pig (Sus scrofa) [TaxId: 9823]
d1wq3a_ : (SER279) (ALA320) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Tyrosyl-tRNA synthetase (TyrRS) |Escherichia coli [TaxId: 316407]
d1l7va_ : (ASN114) (MSE180) [view usage] : f.22.1.1 |ABC transporter involved in vitamin B12 uptake, BtuC |ABC transporter involved in vitamin B12 uptake, BtuC |ABC transporter involved in vitamin B12 uptake, BtuC |ABC transporter involved in vitamin B12 uptake, BtuC |Escherichia coli [TaxId: 562]
d1m59a_ : (GLU44) (ILE75) [view usage] : d.120.1.1 |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5 |Cytochrome b5 |Cow (Bos taurus) [TaxId: 9913]
d1a6ja_ : (ASN15) (GLY61) [view usage] : d.112.1.1 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |IIA domain of mannitol-specific and ntr phosphotransferase EII |Nitrogen regulatory bacterial protein IIa-ntr |Escherichia coli [TaxId: 562]
d2nuud_ : (GLY163) (LEU252) [view usage] : f.44.1.0 |Ammonium transporter |Ammonium transporter |automated matches |automated matches |Escherichia coli [TaxId: 562]
d2gera2 : (LEU166) (SER232) [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1gzsd_ : (SER77) (GLY152) [view usage] : a.168.1.1 |SopE-like GEF domain |SopE-like GEF domain |SopE-like GEF domain |GEF domain of SopE toxin |Salmonella typhimurium [TaxId: 90371]
d2f3da_ : (THR12) (SER88) [view usage] : e.7.1.1 |Carbohydrate phosphatase |Carbohydrate phosphatase |Inositol monophosphatase/fructose-1,6-bisphosphatase-like |Fructose-1,6-bisphosphatase |Pig (Sus scrofa) [TaxId: 9823]
d4hilb_ : (GLU44) (TYR75) [view usage] : d.120.1.1 |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5 |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1yyza_ : (THR12) (SER88) [view usage] : e.7.1.1 |Carbohydrate phosphatase |Carbohydrate phosphatase |Inositol monophosphatase/fructose-1,6-bisphosphatase-like |Fructose-1,6-bisphosphatase |Pig (Sus scrofa) [TaxId: 9823]
d1e2xa2 : (PRO121) (LYS169) [view usage] : a.78.1.1 |GntR ligand-binding domain-like |GntR ligand-binding domain-like |GntR ligand-binding domain-like |Fatty acid responsive transcription factor FadR, C-terminal domain |Escherichia coli [TaxId: 562]
d3tzlb_ : (SER203) (LYS254) [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d2ioga_ : (ARG412) (SER456) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Estrogen receptor alpha |Human (Homo sapiens) [TaxId: 9606]
d2pfma_ : (ILE56) (TRP89) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d3djnb_ : (PRO11) (CYS67) [view usage] : d.370.1.1 |BTG domain-like |BTG domain-like |BTG domain-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3eubb2 : (LYS468) (LEU527) [view usage] : d.87.2.0 |CO dehydrogenase flavoprotein C-domain-like |CO dehydrogenase flavoprotein C-terminal domain-like |automated matches |automated matches |Cow (Bos taurus) [TaxId: 9913]
d4r9ua_ : (TRP115) (GLY181) [view usage] : f.22.1.1 |ABC transporter involved in vitamin B12 uptake, BtuC |ABC transporter involved in vitamin B12 uptake, BtuC |ABC transporter involved in vitamin B12 uptake, BtuC |automated matches |Escherichia coli [TaxId: 83333]
d1grua_ : (ASP64) (SER135) [view usage] : i.16.1.1 |GroE chaperon |GroE chaperon |GroE chaperon |GroE chaperon |Escherichia coli [TaxId: 562]
d4oj7f_ : (ASP128) (LEU189) [view usage] : a.130.1.0 |Chorismate mutase II |Chorismate mutase II |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
d2nwwa1 : (ASP257) (ILE309) [view usage] : f.49.1.1 |Proton glutamate symport protein |Proton glutamate symport protein |Proton glutamate symport protein |Proton glutamate symport protein |Pyrococcus horikoshii [TaxId: 53953]
d1hw2a2 : (PRO121) (LYS169) [view usage] : a.78.1.1 |GntR ligand-binding domain-like |GntR ligand-binding domain-like |GntR ligand-binding domain-like |Fatty acid responsive transcription factor FadR, C-terminal domain |Escherichia coli [TaxId: 562]
d1nuwa_ : (THR1012) (SER1088) [view usage] : e.7.1.1 |Carbohydrate phosphatase |Carbohydrate phosphatase |Inositol monophosphatase/fructose-1,6-bisphosphatase-like |Fructose-1,6-bisphosphatase |Pig (Sus scrofa) [TaxId: 9823]
d4gjqb_ : (THR91) (ALA155) [view usage] : a.224.1.1 |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Human (Homo sapiens) [TaxId: 9606]
d3ilwb_ : (PRO171) (VAL223) [view usage] : e.11.1.0 |Type II DNA topoisomerase C-terminal domain-like |Type II DNA topoisomerase C-terminal domain-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d1n4ca_ : (ASP85) (VAL129) [view usage] : a.2.3.1 |Long alpha-hairpin |Chaperone J-domain |Chaperone J-domain |Auxilin J-domain |Cow (Bos taurus) [TaxId: 9913]
d3gw9b_ : (PHE142) (LEU192) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d3e11a1 : (ASN73) (GLY112) [view usage] : d.92.1.17 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |TTHA0227-like |Uncharacterized protein Acel_2062 |Acidothermus cellulolyticus [TaxId: 28049]
d1gsxa_ : (ALA44) (ALA67) [view usage] : d.110.3.1 |Profilin-like |PYP-like sensor domain (PAS domain) |PYP-like |Photoactive yellow protein, PYP |Methylophilus methylotrophus, strain w3a1 [TaxId: 17]
d1euea_ : (GLU44) (MET70) [view usage] : d.120.1.1 |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5 |Cytochrome b5 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2i89a_ : (GLU44) (TYR75) [view usage] : d.120.1.1 |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5 |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3p88a_ : (SER358) (LEU407) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Bile acid receptor FXR |Human (Homo sapiens) [TaxId: 9606]
d1vbna_ : (SER279) (ARG322) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |automated matches |Escherichia coli [TaxId: 562]
d3e11b_ : (ASN73) (GLY112) [view usage] : d.92.1.17 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |TTHA0227-like |Uncharacterized protein Acel_2062 |Acidothermus cellulolyticus [TaxId: 28049]
d1icca_ : (GLU43) (MET70) [view usage] : d.120.1.1 |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5 |Cytochrome b5 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1iwpa_ : (THR405) (PRO450) [view usage] : c.1.19.3 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Diol dehydratase, alpha subunit |Diol dehydratase, alpha subunit |Klebsiella pneumoniae [TaxId: 573]
d1eyxa_ : (HIS48) (ALA111) [view usage] : a.1.1.3 |Globin-like |Globin-like |Phycocyanin-like phycobilisome proteins |Phycoerythrin alpha subunit |Red algae (Gracilaria chilensis) [TaxId: 2775]
d4r8ea1 : (SER63) (ILE100) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Yersinia pestis [TaxId: 632]
d1cola_ : (VAL110) (GLY152) [view usage] : f.1.1.1 |Toxins' membrane translocation domains |Colicin |Colicin |Colicin A |Escherichia coli [TaxId: 562]
d3ozzb_ : (GLU44) (ILE75) [view usage] : d.120.1.1 |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5 |automated matches |Cow (Bos taurus) [TaxId: 9913]
d1r2fb_ : (LEU178) (PHE253) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Salmonella typhimurium [TaxId: 90371]
d1a52b_ : (ARG412) (LEU454) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Estrogen receptor alpha |Human (Homo sapiens) [TaxId: 9606]
d1kfxs_ : (ASN906) (SER968) [view usage] : a.39.1.8 |EF Hand-like |EF-hand |Penta-EF-hand proteins |Calpain small (regulatory) subunit (domain VI) |Human (Homo sapiens) [TaxId: 9606]
d3djub_ : (PRO11) (CYS67) [view usage] : d.370.1.1 |BTG domain-like |BTG domain-like |BTG domain-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ddfa_ : (LEU213) (ASN250) [view usage] : a.77.1.2 |DEATH domain |DEATH domain |DEATH domain, DD |Fas |Human (Homo sapiens) [TaxId: 9606]
d2o9ea_ : (ASN63) (GLY115) [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |Aquaporin Z |Escherichia coli [TaxId: 562]
d2o9ea_ : (SER125) (ILE176) [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |Aquaporin Z |Escherichia coli [TaxId: 562]
d1dlma_ : (THR8) (GLN69) [view usage] : b.3.6.1 |Prealbumin-like |Aromatic compound dioxygenase |Aromatic compound dioxygenase |Catechol 1,2-dioxygenase |Acinetobacter calcoaceticus [TaxId: 471]
d2o9db_ : (ASN63) (GLY115) [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |Aquaporin Z |Escherichia coli [TaxId: 562]
d2o9db_ : (SER125) (ILE176) [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |Aquaporin Z |Escherichia coli [TaxId: 562]
d3e9va1 : (PRO12) (CYS68) [view usage] : d.370.1.1 |BTG domain-like |BTG domain-like |BTG domain-like |NGF-inducible anti-proliferative protein PC3 (BTG2) |Human (Homo sapiens) [TaxId: 9606]
d4gxga_ : (THR91) (LEU152) [view usage] : a.224.1.1 |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Human (Homo sapiens) [TaxId: 9606]
d3reqb1 : (ASN239) (THR279) [view usage] : c.1.19.1 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Methylmalonyl-CoA mutase, N-terminal (CoA-binding) domain |Methylmalonyl-CoA mutase beta subunit, domain 1 |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, a.104, c.26, d.92, c.93, a.127, e.18, a.103, c.95, e.7, e.11, a.123, d.110, a.25, i.16, d.87, a.1, a.100, a.39, b.3,
a.224, f.1, f.19, a.77, d.120, d.112, a.130, f.44, f.22, a.2, f.49, a.227, a.168, d.370, a.78