Tableau information
Concept source: d1ofha_ amino acid (a.a.) range (THR370)(SER410)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR370) (THR388) H1
(GLY392) (LEU403) H2
(MET404) (SER410) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 122.3° H2
H3 -121.7° -49.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2fj1a2 : (ARG118) (ARG158) [view usage] : a.121.1.1 |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor (Tet-repressor, TetR) |Escherichia coli [TaxId: 562]
d1bg0a1 : (THR32) (ASN60) [view usage] : a.83.1.1 |Guanido kinase N-terminal domain |Guanido kinase N-terminal domain |Guanido kinase N-terminal domain |Arginine kinase, N-domain |Horseshoe crab (Limulus polyphemus) [TaxId: 6850]
d1yaaa_ : (TYR225) (GLU242) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]
d2itga_ : (MET154) (ASP207) [view usage] : c.55.3.2 |Ribonuclease H-like motif |Ribonuclease H-like |Retroviral integrase, catalytic domain |Retroviral integrase, catalytic domain |Human immunodeficiency virus type 1 [TaxId: 11676]
d3rihc_ : (THR205) (ILE223) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
d1yvyb2 : (ASP1489) (PHE1518) [view usage] : c.91.1.0 |PEP carboxykinase-like |PEP carboxykinase-like |automated matches |automated matches |Anaerobiospirillum succiniciproducens [TaxId: 13335]
d1lqgb_ : (TYR19) (THR51) [view usage] : c.18.1.1 |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase |Uracil-DNA glycosylase |Escherichia coli [TaxId: 562]
d3kksa_ : (PRO145) (LYS206) [view usage] : c.55.3.0 |Ribonuclease H-like motif |Ribonuclease H-like |automated matches |automated matches |Bovine immunodeficiency virus [TaxId: 417296]
d4ivec_ : (THR541) (HIS569) [view usage] : a.144.1.1 |PABP domain-like |PABC (PABP) domain |PABC (PABP) domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1gwxa_ : (ILE303) (VAL334) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Peroxisome proliferator-activated receptor delta, PPAR-DELTA |Human (Homo sapiens) [TaxId: 9606]
d3do6a_ : (GLU395) (GLU413) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d2acvb_ : (PRO81) (ILE110) [view usage] : c.87.1.10 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |UDPGT-like |Triterpene UDP-glucosyl transferase UGT71G1 |Medicago truncatula [TaxId: 3880]
d1je6a2 : (SER133) (ARG180) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class I MHC homolog |Human (Homo sapiens), Mic-b [TaxId: 9606]
d1uirb_ : (SER249) (VAL277) [view usage] : c.66.1.17 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Spermidine synthase |Spermidine synthase |Thermus thermophilus [TaxId: 274]
d2gf5a2 : (ASP2) (GLY32) [view usage] : a.77.1.4 |DEATH domain |DEATH domain |DEATH effector domain, DED |FADD (Mort1) |Human (Homo sapiens) [TaxId: 9606]
d1kkqa_ : (ILE294) (MET325) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Peroxisome proliferator activated receptor alpha, PPAR-alpha |Human (Homo sapiens) [TaxId: 9606]
d1xfha_ : (VAL12) (VAL58) [view usage] : f.49.1.1 |Proton glutamate symport protein |Proton glutamate symport protein |Proton glutamate symport protein |Proton glutamate symport protein |Pyrococcus horikoshii [TaxId: 53953]
d2a8ea1 : (GLN176) (GLN211) [view usage] : d.296.1.1 |YktB/PF0168-like |YktB/PF0168-like |YktB-like |Hypothetical protein YktB |Bacillus subtilis [TaxId: 1423]
d1d2ra_ : (SER252) (GLY323) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Tryptophanyl-tRNA synthetase (TrpRS) |Bacillus stearothermophilus [TaxId: 1422]
d3zmla2 : (PRO181) (ALA219) [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Anopheles funestus [TaxId: 62324]
d1p3ta_ : (ASP62) (GLY89) [view usage] : a.132.1.2 |Heme oxygenase-like |Heme oxygenase-like |Heme oxygenase HemO (PigA) |Heme oxygenase HemO (PigA) |Neisseria meningitidis [TaxId: 487]
d2bmoa2 : (PRO156) (SER175) [view usage] : d.129.3.3 |TBP-like |Bet v1-like |Ring hydroxylating alpha subunit catalytic domain |Nitrobenzene dioxygenase alpha subunit, NBDO-alpha |Comamonas sp. JS765 [TaxId: 58226]
d3oq3a_ : (GLY44) (ALA76) [view usage] : a.26.1.3 |4-helical cytokines |4-helical cytokines |Interferons/interleukin-10 (IL-10) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1lgha_ : (SER1) (LYS56) [view usage] : f.3.1.1 |Light-harvesting complex subunits |Light-harvesting complex subunits |Light-harvesting complex subunits |Light-harvesting complex subunits |Rhodospirillum molischianum [TaxId: 1083]
d1ccda_ : (ALA31) (GLN71) [view usage] : a.101.1.1 |Uteroglobin-like |Uteroglobin-like |Uteroglobin-like |Clara cell 17kDa protein |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3kqfa_ : (ILE216) (LYS254) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d3o8jh_ : (LEU324) (ASN365) [view usage] : a.103.1.0 |Citrate synthase |Citrate synthase |automated matches |automated matches |Salmonella enterica [TaxId: 90371]
d1puoa2 : (THR35) (CYS73) [view usage] : a.101.1.1 |Uteroglobin-like |Uteroglobin-like |Uteroglobin-like |Allergen Fel d I-B chain |Cat (Felis catus) [TaxId: 9685]
d1clqa1 : (LEU312) (LYS352) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of family B DNA polymerases |Bacteriophage RB69 [TaxId: 12353]
d3pnlb_ : (GLY177) (LYS209) [view usage] : a.208.1.0 |DhaL-like |DhaL-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3mdqa2 : (GLY162) (THR200) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Cytophaga hutchinsonii [TaxId: 269798]
d3msub_ : (ASN363) (ASP404) [view usage] : a.103.1.0 |Citrate synthase |Citrate synthase |automated matches |automated matches |Francisella tularensis [TaxId: 263]
d1krma_ : (THR39) (CYS72) [view usage] : c.1.9.1 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Adenosine/AMP deaminase |Adenosine deaminase (ADA) |Cow (Bos taurus) [TaxId: 9913]
d3s8ya_ : (PRO181) (ALA209) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Oleispira antarctica [TaxId: 188908]
d3n38a_ : (LEU178) (THR244) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2p6ra1 : (VAL411) (ASN447) [view usage] : a.4.5.43 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |RecQ helicase DNA-binding domain-like |Hel308 helicase |Archaeoglobus fulgidus [TaxId: 2234]
d4jjzb_ : (GLU410) (PRO434) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |automated matches |Moorella thermoacetica [TaxId: 1525]
d2imib2 : (PRO181) (ALA219) [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |African malaria mosquito (Anopheles gambiae) [TaxId: 7165]
d2bj1a1 : (SER12) (GLY50) [view usage] : a.43.1.3 |Ribbon-helix-helix |Ribbon-helix-helix |CopG-like |Nickel responsive regulator NikR, N-terminal domain |Pyrococcus horikoshii [TaxId: 53953]
d1wq1g_ : (LEU814) (LEU866) [view usage] : a.116.1.2 |GTPase activation domain, GAP |GTPase activation domain, GAP |p120GAP domain-like |p120GAP domain |Human (Homo sapiens) [TaxId: 9606]
d3i6ya_ : (PRO181) (ALA209) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Oleispira antarctica [TaxId: 188908]
d3snga_ : (LEU221) (LYS251) [view usage] : a.124.1.0 |Phospholipase C/P1 nuclease |Phospholipase C/P1 nuclease |automated matches |automated matches |Solanum lycopersicum [TaxId: 4081]
d4ffba1 : (ASP206) (PHE245) [view usage] : c.32.1.0 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d2hz2a_ : (THR3) (ALA36) [view usage] : a.1.1.1 |Globin-like |Globin-like |Truncated hemoglobin |Protozoan/bacterial hemoglobin |Synechocystis sp. PCC 6803 [TaxId: 1148]
d2a7kh_ : (LEU184) (HIS229) [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Carbapenem biosynthes protein CarB |Pectobacterium carotovorum [TaxId: 554]
d2a7kf_ : (LEU185) (LYS226) [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Carbapenem biosynthes protein CarB |Pectobacterium carotovorum [TaxId: 554]
d4jimb_ : (GLU410) (SER432) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |automated matches |Moorella thermoacetica [TaxId: 1525]
d3tqga_ : (TYR310) (ASP347) [view usage] : a.103.1.0 |Citrate synthase |Citrate synthase |automated matches |automated matches |Coxiella burnetii [TaxId: 777]
d4dj4a_ : (LEU221) (LYS251) [view usage] : a.124.1.0 |Phospholipase C/P1 nuclease |Phospholipase C/P1 nuclease |automated matches |automated matches |Solanum lycopersicum [TaxId: 4081]
d2i6bb_ : (ALA168) (GLU188) [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |Adenosine kinase |Human (Homo sapiens) [TaxId: 9606]
d1h3ga3 : (ARG345) (GLU387) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Cyclomaltodextrinase, central domain |Flavobacterium sp. 92 [TaxId: 197856]
d3ls2a_ : (CYS179) (ALA209) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Pseudoalteromonas haloplanktis [TaxId: 326442]
d4gx6a_ : (LEU13) (GLY58) [view usage] : e.7.1.1 |Carbohydrate phosphatase |Carbohydrate phosphatase |Inositol monophosphatase/fructose-1,6-bisphosphatase-like |Fructose-1,6-bisphosphatase |Pig (Sus scrofa) [TaxId: 9823]
d1pn3a_ : (LEU129) (GLY161) [view usage] : c.87.1.5 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Gtf glycosyltransferase |TDP-epi-vancosaminyltransferase GtfA |Amycolatopsis orientalis [TaxId: 31958]
d1ioma_ : (ASN310) (GLU350) [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |Citrate synthase |Thermus thermophilus [TaxId: 274]
d1b3qb3 : (SER472) (THR493) [view usage] : d.122.1.3 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |Histidine kinase |Histidine kinase CheA |Thermotoga maritima [TaxId: 2336]
d2acva_ : (PRO81) (ILE110) [view usage] : c.87.1.10 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |UDPGT-like |Triterpene UDP-glucosyl transferase UGT71G1 |Medicago truncatula [TaxId: 3880]
d2r2fb_ : (LEU178) (GLY245) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Salmonella typhimurium [TaxId: 90371]
d3o8ja_ : (LEU324) (GLN363) [view usage] : a.103.1.0 |Citrate synthase |Citrate synthase |automated matches |automated matches |Salmonella enterica [TaxId: 90371]
d4by5b_ : (THR143) (LEU184) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1koob_ : (SER326) (PRO346) [view usage] : c.10.2.3 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |mRNA export factor tap |mRNA export factor tap |Human (Homo sapiens) [TaxId: 9606]
d1zwyd_ : (GLY147) (ASN176) [view usage] : c.51.4.0 |Anticodon-binding domain-like |ITPase-like |automated matches |automated matches |Vibrio cholerae [TaxId: 666]
d1w36c3 : (ILE1088) (PHE1119) [view usage] : c.52.1.25 |Restriction endonuclease-like |Restriction endonuclease-like |Exodeoxyribonuclease V beta chain (RecC), C-terminal domain |Exodeoxyribonuclease V beta chain (RecC), C-terminal domain |Escherichia coli [TaxId: 562]
d1j77a_ : (ASP62) (GLY89) [view usage] : a.132.1.2 |Heme oxygenase-like |Heme oxygenase-like |Heme oxygenase HemO (PigA) |Heme oxygenase HemO (PigA) |Neisseria meningitidis [TaxId: 487]
d3riha_ : (THR205) (ILE223) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
d1sg7a1 : (PRO30) (ARG62) [view usage] : a.239.1.1 |ChaB-like |ChaB-like |ChaB-like |Putative cation transport regulator ChaB |Escherichia coli [TaxId: 562]
d2ez6a1 : (ASN101) (GLY146) [view usage] : a.149.1.1 |RNase III domain-like |RNase III domain-like |RNase III catalytic domain-like |RNase III endonuclease catalytic domain |Aquifex aeolicus [TaxId: 63363]
d1eyja_ : (LEU13) (GLY58) [view usage] : e.7.1.1 |Carbohydrate phosphatase |Carbohydrate phosphatase |Inositol monophosphatase/fructose-1,6-bisphosphatase-like |Fructose-1,6-bisphosphatase |Pig (Sus scrofa) [TaxId: 9823]
d1q9ya1 : (LEU315) (LYS355) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of family B DNA polymerases |Bacteriophage RB69 [TaxId: 12353]
d2y3ia_ : (GLY372) (LEU413) [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ofha_ : (THR370) (SER410) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |HslU |Haemophilus influenzae [TaxId: 727]
d3tqgb_ : (LEU307) (ASP347) [view usage] : a.103.1.0 |Citrate synthase |Citrate synthase |automated matches |automated matches |Coxiella burnetii [TaxId: 777]
d3n9ia_ : (SER269) (GLY341) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |automated matches |Yersinia pestis [TaxId: 214092]
d4gsna2 : (PRO181) (LYS220) [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |African malaria mosquito (Anopheles gambiae) [TaxId: 7165]
d1eexb_ : (ALA70) (GLY99) [view usage] : c.51.3.1 |Anticodon-binding domain-like |B12-dependent dehydatase associated subunit |Diol dehydratase, beta subunit |Diol dehydratase, beta subunit |Klebsiella oxytoca [TaxId: 571]
d4m85b_ : (LEU26) (PHE53) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Staphylococcus aureus [TaxId: 158878]
d2iiza_ : (LEU189) (SER223) [view usage] : d.58.4.14 |Ferredoxin-like |Dimeric alpha+beta barrel |Dyp-type peroxidase-like |Melanin biosynthesis protein TyrA |Shewanella oneidensis [TaxId: 70863]
d3uora_ : (TRP375) (GLU419) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Xanthomonas axonopodis [TaxId: 190486]
d1a1za_ : (ASP2) (GLY32) [view usage] : a.77.1.4 |DEATH domain |DEATH domain |DEATH effector domain, DED |FADD (Mort1) |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.10, c.67, c.69, c.94, c.2, d.58, c.26, c.66, c.14, d.129, c.72, d.122, c.37, c.18, c.55, a.103, c.86, c.87, c.32,
e.7, a.132, a.123, d.108, a.25, c.51, d.19, c.52, a.1, a.4, a.39, c.91, a.45, a.83, a.124, a.77, a.116, a.26, a.149, f.49,
a.144, a.121, a.208, d.296, a.43, a.101, f.3, a.239