Tableau information
Concept source: d2y6wa_ amino acid (a.a.) range (THR10)(HIS69)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR10) (GLY26) H1
(PRO41) (GLU54) H2
(ARG56) (HIS69) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -43.6° H2
H3 52.1° -52.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1e1cb1 : (MET429) (PHE466) [view usage] : c.1.19.1 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Methylmalonyl-CoA mutase, N-terminal (CoA-binding) domain |Methylmalonyl-CoA mutase beta subunit, domain 1 |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
d1ndba1 : (SER296) (ASN320) [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Carnitine acetyltransferase |Mouse (Mus musculus) [TaxId: 10090]
d2nxph_ : (LYS287) (VAL306) [view usage] : d.379.1.1 |Taf5 N-terminal domain-like |Taf5 N-terminal domain-like |Taf5 N-terminal domain-like |TAF5 subunit of TFIID |Human (Homo sapiens) [TaxId: 9606]
d2f43a1 : (THR380) (PHE403) [view usage] : a.69.1.0 |Left-handed superhelix |C-terminal domain of alpha and beta subunits of F1 ATP synthase |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3k4pa_ : (ARG423) (ALA444) [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) |Aspergillus niger [TaxId: 5061]
d1y5ea1 : (SER144) (LEU166) [view usage] : c.57.1.1 |Molybdenum cofactor biosynthesis proteins |Molybdenum cofactor biosynthesis proteins |MogA-like |MoaB |Bacillus cereus [TaxId: 1396]
d2reqa1 : (GLY432) (LYS469) [view usage] : c.1.19.1 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Methylmalonyl-CoA mutase, N-terminal (CoA-binding) domain |Methylmalonyl-CoA mutase alpha subunit, domain 1 |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
d1pg5a2 : (ASP267) (GLU299) [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Sulfolobus acidocaldarius [TaxId: 2285]
d4amua2 : (THR310) (THR339) [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Mycoplasma penetrans [TaxId: 28227]
d2akab1 : (THR274) (GLN303) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Dynamin G domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1fpxa2 : (LEU111) (GLU136) [view usage] : c.66.1.12 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Plant O-methyltransferase, C-terminal domain |Isoflavone O-methyltransferase |Alfalfa (Medicago sativa) [TaxId: 3879]
d4ds7b_ : (PHE66) (VAL92) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Kluyveromyces lactis [TaxId: 284590]
d2a81a_ : (PRO199) (PHE233) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pectobacterium carotovorum [TaxId: 554]
d3zv6a_ : (PRO100) (LEU127) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Comamonas testosteroni [TaxId: 285]
d2ym9c_ : (ASP131) (LEU178) [view usage] : a.250.1.0 |IpaD-like |IpaD-like |automated matches |automated matches |Salmonella enterica [TaxId: 216597]
d1y2oa1 : (LEU3) (SER66) [view usage] : a.238.1.3 |BAR/IMD domain-like |BAR/IMD domain-like |IMD domain |BAP2/IRSp53 N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d3zv3b_ : (PRO100) (LEU127) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Pandoraea pnomenusa [TaxId: 93220]
d2f1kc1 : (SER210) (GLN234) [view usage] : a.100.1.12 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |TyrA dimerization domain-like |Prephenate dehydrogenase TyrA |Synechocystis sp. PCC 6803 [TaxId: 1148]
d3wc4a_ : (GLN405) (SER446) [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Clitoria ternatea [TaxId: 43366]
d2f1ka1 : (SER210) (GLN234) [view usage] : a.100.1.12 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |TyrA dimerization domain-like |Prephenate dehydrogenase TyrA |Synechocystis sp. PCC 6803 [TaxId: 1148]
d3tzlb_ : (HIS14) (GLN33) [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d3tzlb_ : (TYR259) (ILE317) [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d2ekpa_ : (PRO207) (LEU225) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d4jvna_ : (GLU4) (PHE33) [view usage] : c.37.1.5 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |PAPS sulfotransferase |Estrogen sulfotransferase (STE, sult1e1) |Human (Homo sapiens) [TaxId: 9606]
d2q9ub1 : (GLU87) (THR102) [view usage] : d.157.1.3 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |ROO N-terminal domain-like |Nitric oxide reductase N-terminal domain |Giardia intestinalis [TaxId: 5741]
d4nr5a_ : (ARG1169) (SER1195) [view usage] : a.29.2.1 |Bromodomain-like |Bromodomain |Bromodomain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2f8sa1 : (ASP266) (ALA297) [view usage] : b.34.14.1 |SH3-like barrel |PAZ domain |PAZ domain |automated matches |Aquifex aeolicus [TaxId: 63363]
d1g3ma_ : (SER3) (PHE33) [view usage] : c.37.1.5 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |PAPS sulfotransferase |Estrogen sulfotransferase (STE, sult1e1) |Human (Homo sapiens) [TaxId: 9606]
d1sk8a_ : (LYS422) (PHE443) [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) |Aspergillus fumigatus [TaxId: 5085]
d4nr4a_ : (ARG1169) (LEU1196) [view usage] : a.29.2.1 |Bromodomain-like |Bromodomain |Bromodomain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1jjia_ : (VAL9) (SER27) [view usage] : c.69.1.2 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase |Carboxylesterase |Archaeoglobus fulgidus [TaxId: 2234]
d1s2xa_ : (VAL0) (ARG22) [view usage] : a.47.3.1 |STAT-like |Cag-Z |Cag-Z |Cag-Z |Helicobacter pylori [TaxId: 210]
d1b4ua_ : (ASP9) (LYS46) [view usage] : a.88.1.1 |LigA subunit of an aromatic-ring-opening dioxygenase LigAB |LigA subunit of an aromatic-ring-opening dioxygenase LigAB |LigA subunit of an aromatic-ring-opening dioxygenase LigAB |LigA subunit of an aromatic-ring-opening dioxygenase LigAB |Sphingomonas paucimobilis, formerly Pseudomonas paucimobilis [TaxId: 13689]
d2uuld_ : (LEU27) (GLU62) [view usage] : a.1.1.3 |Globin-like |Globin-like |Phycocyanin-like phycobilisome proteins |automated matches |Phormidium sp. [TaxId: 1199]
d1xmea_ : (LEU181) (GLY214) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial ba3 type cytochrome c oxidase subunit I |Thermus thermophilus [TaxId: 274]
d1maba1 : (THR380) (PHE403) [view usage] : a.69.1.1 |Left-handed superhelix |C-terminal domain of alpha and beta subunits of F1 ATP synthase |C-terminal domain of alpha and beta subunits of F1 ATP synthase |F1 ATP synthase alpha subunit, domain 3 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1xdfa1 : (GLU130) (ASN157) [view usage] : d.129.3.1 |TBP-like |Bet v1-like |Pathogenesis-related protein 10 (PR10)-like |Plant pathogenesis-related protein PR10 |Yellow lupine (Lupinus luteus) [TaxId: 3873]
d2qvba_ : (GLY198) (GLU234) [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d2onkc1 : (MET1) (ASP44) [view usage] : f.58.1.1 |MetI-like |MetI-like |MetI-like |Molybdate/tungstate transport system permease protein WtpB (ModB) |Archaeoglobus fulgidus [TaxId: 2234]
d1i58a_ : (ARG393) (ILE415) [view usage] : d.122.1.3 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |Histidine kinase |Histidine kinase CheA |Thermotoga maritima [TaxId: 2336]
d3r7da2 : (ASP259) (LEU289) [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d3p3xb_ : (GLY95) (LEU132) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces thioluteus [TaxId: 66431]
d2hyec2 : (ASP279) (LYS305) [view usage] : a.118.17.1 |alpha-alpha superhelix |Cullin repeat-like |Cullin repeat |Cullin-4A |Human (Homo sapiens) [TaxId: 9606]
d2ff2b_ : (PRO80) (ILE98) [view usage] : c.70.1.1 |Nucleoside hydrolase |Nucleoside hydrolase |Nucleoside hydrolase |automated matches |Trypanosoma vivax [TaxId: 5699]
d4a6tc_ : (PRO326) (PHE364) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Chromobacterium violaceum [TaxId: 536]
d1fp2a2 : (LEU111) (GLU136) [view usage] : c.66.1.12 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Plant O-methyltransferase, C-terminal domain |Isoflavone O-methyltransferase |Alfalfa (Medicago sativa) [TaxId: 3879]
d2g4ca1 : (HIS467) (ASN484) [view usage] : c.51.1.1 |Anticodon-binding domain-like |Class II aaRS ABD-related |Anticodon-binding domain of Class II aaRS |The aaRS-like accessory subunit of mitochondrial polymerase gamma, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d3j38x_ : (GLY6) (ALA30) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Drosophila melanogaster [TaxId: 7227]
d1x1ea_ : (PRO207) (LEU225) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d1s9ci2 : (LEU57) (ILE77) [view usage] : d.38.1.4 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |MaoC-like |2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase |Human (Homo sapiens) [TaxId: 9606]
d1peua2 : (THR628) (GLY642) [view usage] : c.7.1.2 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |R1 subunit of ribonucleotide reductase, C-terminal domain |R1 subunit of ribonucleotide reductase, C-terminal domain |Salmonella typhimurium [TaxId: 90371]
d2h3pa1 : (SER296) (ASN320) [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Carnitine acetyltransferase |Mouse (Mus musculus) [TaxId: 10090]
d4af1a2 : (ASP261) (ALA277) [view usage] : c.55.4.0 |Ribonuclease H-like motif |Translational machinery components |automated matches |automated matches |Halobacterium salinarum [TaxId: 478009]
d1f9ga1 : (TYR404) (THR426) [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1hy3b_ : (SER3) (PHE33) [view usage] : c.37.1.5 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |PAPS sulfotransferase |Estrogen sulfotransferase (STE, sult1e1) |Human (Homo sapiens) [TaxId: 9606]
d4ba4a_ : (HIS325) (PHE364) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Chromobacterium violaceum [TaxId: 536]
d2pblb_ : (LEU3) (GLN35) [view usage] : c.69.1.2 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase |Uncharacterized protein TM1040_2492 |Silicibacter sp. tm1040 [TaxId: 292414]
d1nmra_ : (GLN9) (PRO40) [view usage] : a.144.1.1 |PABP domain-like |PABC (PABP) domain |PABC (PABP) domain |poly(A) binding protein |Trypanosoma cruzi [TaxId: 5693]
d4nmub_ : (CYS44) (GLY65) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d4jvla_ : (SER3) (PHE33) [view usage] : c.37.1.5 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |PAPS sulfotransferase |Estrogen sulfotransferase (STE, sult1e1) |Human (Homo sapiens) [TaxId: 9606]
d3qjqa_ : (LEU181) (GLY214) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial ba3 type cytochrome c oxidase subunit I |Thermus thermophilus [TaxId: 274]
d2yooa_ : (ASP83) (ASP104) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d2h7ba1 : (ALA1) (SER22) [view usage] : a.277.1.1 |TAFH domain-like |TAFH domain-like |TAFH domain-like |ETO |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.67, c.69, a.104, c.2, i.1, a.118, c.26, d.157, a.102, c.66, c.14, d.129, d.122, c.37, c.7, c.47, c.55, c.87, c.60,
c.57, c.78, c.43, d.38, c.51, f.24, a.1, a.100, b.34, a.39, a.29, f.1, c.70, f.58, a.69, a.47, d.379, a.144, a.238, a.277,
a.88, a.250