Tableau information
Concept source: d1g1ua_ amino acid (a.a.) range (ALA271)(ILE318)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA271) (ILE286) H1
(PRO293) (GLY304) H2
(GLY304) (ILE318) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 128.0° H2
H3 97.8° -50.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1zb6a1 : (GLU3) (VAL42) [view usage] : d.313.1.1 |Antiparallel beta/alpha barrel (PT-barrel) |Prenyltransferase-like |Prenyltransferase-like |Aromatic prenyltransferase |Streptomyces sp. CL190 [TaxId: 93372]
d2g4dc_ : (ASP602) (HIS640) [view usage] : d.3.1.7 |Cysteine proteinases |Cysteine proteinases |Adenain-like |Sentrin-specific protease 1 |Human (Homo sapiens) [TaxId: 9606]
d4oztu_ : (VAL198) (ARG254) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Pediculus humanus [TaxId: 121224]
d4oztu_ : (SER269) (THR284) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Pediculus humanus [TaxId: 121224]
d2iy1a_ : (ASP602) (HIS640) [view usage] : d.3.1.7 |Cysteine proteinases |Cysteine proteinases |Adenain-like |Sentrin-specific protease 1 |Human (Homo sapiens) [TaxId: 9606]
d2i2tx1 : (ALA52) (GLY74) [view usage] : d.325.1.1 |L28p-like |L28p-like |Ribosomal protein L28 |Ribosomal protein L28 (L28p) |Escherichia coli [TaxId: 562]
d1p6gk_ : (THR45) (GLY77) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |70S ribosome functional complex |Escherichia coli [TaxId: 562]
d2r3ea_ : (ILE233) (TYR273) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Enterococcus faecalis [TaxId: 226185]
d1rc7a1 : (TYR36) (GLU88) [view usage] : a.149.1.1 |RNase III domain-like |RNase III domain-like |RNase III catalytic domain-like |RNase III endonuclease catalytic domain |Aquifex aeolicus [TaxId: 63363]
d1vgma_ : (ALA222) (LYS251) [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |automated matches |Sulfolobus tokodaii [TaxId: 111955]
d1fwxa1 : (ASP455) (GLY472) [view usage] : b.6.1.4 |Cupredoxin-like |Cupredoxins |Nitrosocyanin |Nitrous oxide reductase, C-terminal domain |Paracoccus denitrificans [TaxId: 266]
d1zcwa_ : (GLU3) (VAL42) [view usage] : d.313.1.1 |Antiparallel beta/alpha barrel (PT-barrel) |Prenyltransferase-like |Prenyltransferase-like |Aromatic prenyltransferase |Streptomyces sp. CL190 [TaxId: 93372]
d1f8ma_ : (ASN319) (GLY340) [view usage] : c.1.12.7 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |Phosphoenolpyruvate mutase/Isocitrate lyase-like |Isocitrate lyase |Mycobacterium tuberculosis [TaxId: 1773]
d2iyca_ : (ASN599) (HIS640) [view usage] : d.3.1.7 |Cysteine proteinases |Cysteine proteinases |Adenain-like |Sentrin-specific protease 1 |Human (Homo sapiens) [TaxId: 9606]
d1noia_ : (VAL24) (GLU76) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1dt1a_ : (ASP3) (ALA38) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Cytochrome c552 |Thermus thermophilus [TaxId: 274]
d2avaa_ : (LYS3) (GLU79) [view usage] : a.28.1.0 |Acyl carrier protein-like |ACP-like |automated matches |automated matches |Spinach (Spinacia oleracea) [TaxId: 3562]
d4qm0a_ : (SER312) (TYR369) [view usage] : a.123.1.0 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4h24c_ : (GLN73) (SER108) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d1s9cg2 : (LEU25) (MET70) [view usage] : d.38.1.4 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |MaoC-like |2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase |Human (Homo sapiens) [TaxId: 9606]
d1r2ua_ : (THR53) (ASP87) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Troponin C |Rainbow trout (Oncorhynchus mykiss) [TaxId: 8022]
d3l0la_ : (SER312) (TYR369) [view usage] : a.123.1.0 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4ctha_ : (SER58) (ARG93) [view usage] : d.92.1.4 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neutral endopeptidase (neprilysin) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1auib_ : (LYS124) (ASP160) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calcineurin regulatory subunit (B-chain) |Human (Homo sapiens) [TaxId: 9606]
d2o3la1 : (MSE49) (VAL95) [view usage] : a.69.4.1 |Left-handed superhelix |BH3980-like |BH3980-like |Hypothetical protein BCE3448 |Bacillus cereus [TaxId: 1396]
d1auza_ : (SER83) (LEU110) [view usage] : c.13.2.1 |SpoIIaa-like |SpoIIaa-like |Anti-sigma factor antagonist SpoIIaa |Anti-sigma factor antagonist SpoIIaa |Bacillus subtilis [TaxId: 1423]
d3nsqb_ : (ILE268) (ILE318) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Retinoid-X receptor alpha (RXR-alpha) |Human (Homo sapiens) [TaxId: 9606]
d2io1c_ : (ASP547) (HIS585) [view usage] : d.3.1.7 |Cysteine proteinases |Cysteine proteinases |Adenain-like |Sentrin-specific protease 2, SENP2 |Human (Homo sapiens) [TaxId: 9606]
d1s48a_ : (THR410) (ALA441) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Bovine viral diarrhea virus [TaxId: 11099]
d3afib1 : (THR134) (ALA155) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Bradyrhizobium japonicum [TaxId: 224911]
d1i4sa_ : (ALA45) (ALA84) [view usage] : a.149.1.1 |RNase III domain-like |RNase III domain-like |RNase III catalytic domain-like |RNase III endonuclease catalytic domain |Aquifex aeolicus [TaxId: 63363]
d3et1b_ : (ALA268) (MET320) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Peroxisome proliferator activated receptor alpha, PPAR-alpha |Human (Homo sapiens) [TaxId: 9606]
d1mdue2 : (GLY184) (LYS217) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Chicken (Gallus gallus) [TaxId: 9031]
d2r3ba_ : (ILE233) (TYR273) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Enterococcus faecalis [TaxId: 226185]
d1p28a_ : (SER0) (GLY53) [view usage] : a.39.2.1 |EF Hand-like |Insect pheromone/odorant-binding proteins |Insect pheromone/odorant-binding proteins |Pheromone binding protein PBPLma |Madeira cockroach (Leucophaea maderae) [TaxId: 36963]
d1urda_ : (ASN177) (HIS227) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Alicyclobacillus acidocaldarius [TaxId: 405212]
d2jq4a1 : (SER34) (SER65) [view usage] : a.28.1.1 |Acyl carrier protein-like |ACP-like |Acyl-carrier protein (ACP) |Hypothetical protein Atu2571 |Agrobacterium tumefaciens [TaxId: 358]
d1fpzc_ : (SER163) (LEU200) [view usage] : c.45.1.1 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Dual specificity phosphatase-like |Kinase associated phosphatase (kap) |Human (Homo sapiens) [TaxId: 9606]
d3nspa_ : (PRO264) (LYS321) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Retinoid-X receptor alpha (RXR-alpha) |Human (Homo sapiens) [TaxId: 9606]
d3wyha_ : (PRO63) (PRO132) [view usage] : d.2.1.5 |Lysozyme-like |Lysozyme-like |G-type lysozyme |automated matches |Struthio camelus [TaxId: 8801]
d3nb6a_ : (SER189) (HIS211) [view usage] : d.2.1.10 |Lysozyme-like |Lysozyme-like |PBP transglycosylase domain-like |automated matches |Aquifex aeolicus [TaxId: 63363]
d2g4da1 : (ASP602) (HIS640) [view usage] : d.3.1.7 |Cysteine proteinases |Cysteine proteinases |Adenain-like |Sentrin-specific protease 1 |Human (Homo sapiens) [TaxId: 9606]
d1td6a_ : (GLU221) (LEU286) [view usage] : a.234.1.1 |Hypothetical protein MPN330 |Hypothetical protein MPN330 |Hypothetical protein MPN330 |Hypothetical protein MPN330 |Mycoplasma pneumoniae [TaxId: 2104]
d1xnva1 : (THR13) (LEU55) [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Propionyl-CoA carboxylase complex B subunit, PccB |Streptomyces coelicolor [TaxId: 1902]
d1y7qa1 : (GLU100) (SER128) [view usage] : a.28.3.2 |Acyl carrier protein-like |Retrovirus capsid dimerization domain-like |SCAN domain |Zinc finger protein 174 |Human (Homo sapiens) [TaxId: 9606]
d2kfma_ : (ASN173) (ALA225) [view usage] : d.6.1.1 |Prion-like |Prion-like |Prion-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2dgza1 : (THR1194) (SER1227) [view usage] : a.60.8.1 |SAM domain-like |HRDC-like |HRDC domain from helicases |Werner syndrome ATP-dependent helicase, WRN |Human (Homo sapiens) [TaxId: 9606]
d2ecpa_ : (HIS285) (GLU333) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Maltodextrin phosphorylase (MALP) |Escherichia coli [TaxId: 562]
d1u61a_ : (SER9) (ALA63) [view usage] : a.149.1.1 |RNase III domain-like |RNase III domain-like |RNase III catalytic domain-like |Hypothetical protein BC0111 |Bacillus cereus [TaxId: 1396]
d2ebka_ : (THR83) (SER123) [view usage] : d.20.1.0 |UBC-like |UBC-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1qnia1 : (GLU454) (GLY471) [view usage] : b.6.1.4 |Cupredoxin-like |Cupredoxins |Nitrosocyanin |Nitrous oxide reductase, C-terminal domain |Pseudomonas nautica [TaxId: 2743]
d1diia2 : (SER153) (HIS178) [view usage] : d.145.1.1 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |FAD-linked oxidases, N-terminal domain |Flavoprotein subunit of p-cresol methylhydroxylase |Pseudomonas putida [TaxId: 303]
d1qyza_ : (GLY4) (ALA38) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Cytochrome c552 |Thermus thermophilus [TaxId: 274]
d1mf8b_ : (LYS124) (ASP160) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calcineurin regulatory subunit (B-chain) |Human (Homo sapiens) [TaxId: 9606]
d2r3bb_ : (ILE233) (TYR273) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Enterococcus faecalis [TaxId: 226185]
d2e1ea1 : (THR1194) (ASN1226) [view usage] : a.60.8.1 |SAM domain-like |HRDC-like |HRDC domain from helicases |Werner syndrome ATP-dependent helicase, WRN |Human (Homo sapiens) [TaxId: 9606]
d2uzqa_ : (PRO530) (ARG544) [view usage] : c.46.1.1 |Rhodanese/Cell cycle control phosphatase |Rhodanese/Cell cycle control phosphatase |Cell cycle control phosphatase, catalytic domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.1, c.69, c.94, a.104, i.1, d.92, c.14, c.45, c.72, c.55, a.103, d.2, d.3, c.87, b.6, c.13, a.123, d.20, d.38,
d.145, a.39, a.3, c.46, d.6, a.149, a.60, a.28, a.69, d.313, a.234, d.325