Tableau information
Concept source: d1xl7a1 amino acid (a.a.) range (ALA27)(ARG75)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA27) (SER38) H1
(ASN44) (GLY61) H2
(GLY61) (ARG75) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 167.9° H2
H3 121.8° -55.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.5° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1k89a2 : (SER1) (HIS39) [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Glutamate dehydrogenase |Clostridium symbiosum [TaxId: 1512]
d1h9tb2 : (ALA138) (PRO183) [view usage] : a.78.1.1 |GntR ligand-binding domain-like |GntR ligand-binding domain-like |GntR ligand-binding domain-like |Fatty acid responsive transcription factor FadR, C-terminal domain |Escherichia coli [TaxId: 562]
d2cpra1 : (GLN549) (ARG577) [view usage] : a.60.8.4 |SAM domain-like |HRDC-like |EXOSC10 HRDC domain-like |Exosome component 10, EXOSC10 |Human (Homo sapiens) [TaxId: 9606]
d4jbeb_ : (ALA48) (ALA93) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Saccharomonospora viridis [TaxId: 471857]
d1yv2a_ : (GLU230) (GLY263) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Hepatitis C virus [TaxId: 11103]
d4dhib_ : (PRO49) (GLY77) [view usage] : d.3.1.0 |Cysteine proteinases |Cysteine proteinases |automated matches |automated matches |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d1qgda2 : (ARG4) (PHE44) [view usage] : c.36.1.10 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like PP module |Transketolase (TK), PP module |Escherichia coli [TaxId: 562]
d3stmx_ : (ASN14) (ILE35) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Liver fatty acid binding protein |Human (Homo sapiens) [TaxId: 9606]
d1yova_ : (LYS235) (THR278) [view usage] : c.111.1.2 |Activating enzymes of the ubiquitin-like proteins |Activating enzymes of the ubiquitin-like proteins |Ubiquitin activating enzymes (UBA) |Amyloid beta precursor protein-binding protein 1, APPBP1 |Human (Homo sapiens) [TaxId: 9606]
d1xmda1 : (ALA27) (LYS77) [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Peroxisomal carnitine O-octanoyltransferase, COT |Mouse (Mus musculus) [TaxId: 10090]
d4c7va1 : (GLN4) (HIS46) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Lactobacillus salivarius [TaxId: 362948]
d4jbea_ : (HIS45) (ALA93) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Saccharomonospora viridis [TaxId: 471857]
d3hyla1 : (SER4) (PHE46) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
d1o20a_ : (ARG40) (LEU88) [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Gamma-glutamyl phosphate reductase |Thermotoga maritima [TaxId: 2336]
d1r9ja2 : (SER3) (VAL44) [view usage] : c.36.1.10 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like PP module |Transketolase (TK), PP module |Leishmania mexicana mexicana [TaxId: 44270]
d1bgxt1 : (TRP179) (LEU214) [view usage] : a.60.7.1 |SAM domain-like |5' to 3' exonuclease, C-terminal subdomain |5' to 3' exonuclease, C-terminal subdomain |5' to 3' exonuclease domain of DNA polymerase Taq |Thermus aquaticus [TaxId: 271]
d3m49b1 : (SER4) (PHE46) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
d1t12a_ : (THR41) (CYS73) [view usage] : a.52.1.1 |Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |Plant lipid-transfer and hydrophobic proteins |automated matches |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d2e74b1 : (TYR82) (ASN116) [view usage] : f.32.1.1 |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Subunit IV of the cytochrome b6f complex |Mastigocladus laminosus [TaxId: 83541]
d1q6xa1 : (GLN32) (ALA83) [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Choline O-acetyltransferase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2onga2 : (MET458) (ARG493) [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Mentha spicata [TaxId: 29719]
d1bgva2 : (SER1) (HIS39) [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Glutamate dehydrogenase |Clostridium symbiosum [TaxId: 1512]
d1q50a_ : (ALA492) (THR517) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Trypanosome (Leishmania mexicana) [TaxId: 5665]
d3m49a1 : (SER4) (PHE46) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
d2g25a2 : (LEU75) (HIS123) [view usage] : c.36.1.10 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like PP module |Pyruvate dehydrogenase E1 component, PP module |Escherichia coli [TaxId: 562]
d4obca_ : (GLU230) (GLY263) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Hepatitis c virus jfh-1 [TaxId: 356411]
d2zt9b_ : (TYR82) (ASN116) [view usage] : f.32.1.1 |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |automated matches |Nostoc sp. [TaxId: 103690]
d1ar1a_ : (VAL265) (MET327) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial aa3 type cytochrome c oxidase subunit I |Paracoccus denitrificans [TaxId: 266]
d2yfha1 : (LYS3) (HIS40) [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |automated matches |Clostridium symbiosum [TaxId: 1512]
d3iaca_ : (SER417) (THR468) [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Salmonella typhimurium [TaxId: 90371]
d1xmca1 : (ALA27) (ARG78) [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Peroxisomal carnitine O-octanoyltransferase, COT |Mouse (Mus musculus) [TaxId: 10090]
d1pt8a_ : (TRP277) (THR297) [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |Hypothetical protein YfdW |Escherichia coli [TaxId: 562]
d1a2yc_ : (ASP101) (THR118) [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Chicken (Gallus gallus) [TaxId: 9031]
d2gsma_ : (VAL273) (MET335) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial aa3 type cytochrome c oxidase subunit I |Rhodobacter sphaeroides [TaxId: 1063]
d3gzna_ : (TYR244) (ASN284) [view usage] : c.111.1.2 |Activating enzymes of the ubiquitin-like proteins |Activating enzymes of the ubiquitin-like proteins |Ubiquitin activating enzymes (UBA) |Amyloid beta precursor protein-binding protein 1, APPBP1 |Human (Homo sapiens) [TaxId: 9606]
d3izbo_ : (LYS112) (ASN151) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3dtuc_ : (VAL273) (MET335) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial aa3 type cytochrome c oxidase subunit I |Rhodobacter sphaeroides [TaxId: 1063]
d1eo0a_ : (ASP2) (PHE34) [view usage] : a.48.3.1 |N-cbl like |Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |Transcription elongation factor TFIIS N-domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3ld2b_ : (ILE11) (SER45) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Streptococcus mutans [TaxId: 210007]
d1r71d_ : (GLU196) (PRO224) [view usage] : a.4.14.1 |DNA/RNA-binding 3-helical bundle |KorB DNA-binding domain-like |KorB DNA-binding domain-like |Transcriptional repressor protein KorB DNA-binding domain |Escherichia coli [TaxId: 562]
d1ay0a1 : (ASP6) (MET48) [view usage] : c.36.1.10 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like PP module |Transketolase (TK), PP module |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4klra_ : (THR81) (GLY127) [view usage] : c.92.1.1 |Chelatase-like |Chelatase |Ferrochelatase |Ferrochelatase |Human (Homo sapiens) [TaxId: 9606]
d1gpua1 : (ASP6) (MET48) [view usage] : c.36.1.10 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like PP module |Transketolase (TK), PP module |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1xl7a1 : (ALA27) (ARG75) [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Peroxisomal carnitine O-octanoyltransferase, COT |Mouse (Mus musculus) [TaxId: 10090]
d3ld2a_ : (ILE11) (ASN46) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Streptococcus mutans [TaxId: 210007]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.1, c.123, i.1, c.82, a.128, c.92, c.80, c.36, d.2, b.60, d.3, d.108, c.43, f.24, c.111, a.4, c.58, a.60, a.52,
a.48, f.32, a.78