Tableau information
Concept source: d1fwka2 amino acid (a.a.) range (LYS218)(VAL249)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS218) (SER227) H1
(ILE231) (ILE239) H2
(TYR242) (VAL249) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -86.3° H2
H3 -153.3° 104.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1ud0b_ : (ARG537) (SER613) [view usage] : a.8.4.1 |immunoglobulin/albumin-binding domain-like |Heat shock protein 70kD (HSP70), C-terminal subdomain |Heat shock protein 70kD (HSP70), C-terminal subdomain |DnaK |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3pu5a_ : (SER155) (MSE211) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Bordetella parapertussis [TaxId: 519]
d1a6sa_ : (TRP51) (GLU87) [view usage] : a.61.1.4 |Retroviral matrix proteins |Retroviral matrix proteins |GAG polyprotein M-domain |GAG polyprotein M-domain |Rous sarcoma virus [TaxId: 11886]
d3h3xr_ : (PRO385) (SER420) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |automated matches |Desulfovibrio fructosovorans [TaxId: 878]
d1xoca1 : (GLN427) (ILE460) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Oligo-peptide binding protein (OPPA) |Bacillus subtilis [TaxId: 1423]
d3rycc2 : (THR381) (VAL437) [view usage] : d.79.2.1 |Bacillus chorismate mutase-like |Tubulin C-terminal domain-like |Tubulin, C-terminal domain |automated matches |Sheep (Ovis aries) [TaxId: 9940]
d2ik8b1 : (ALA107) (LEU144) [view usage] : a.91.1.1 |Regulator of G-protein signaling, RGS |Regulator of G-protein signaling, RGS |Regulator of G-protein signaling, RGS |Regulator of G-protein signaling 16, RGS16 |Human (Homo sapiens) [TaxId: 9606]
d3qfna_ : (ASN66) (ASN110) [view usage] : d.159.1.0 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 171101]
d1ny9a_ : (TYR209) (THR252) [view usage] : a.181.1.1 |Antibiotic binding domain of TipA-like multidrug resistance regulators |Antibiotic binding domain of TipA-like multidrug resistance regulators |Antibiotic binding domain of TipA-like multidrug resistance regulators |Transcriptional activator TipA-S |Streptomyces lividans [TaxId: 1916]
d3du7b1 : (SER381) (ASP437) [view usage] : i.10.1.1 |Microtubule complexes |Microtubule complexes |Microtubule complexes |Tubulin:stathmin-like domain complex |Cow (Bos taurus) [TaxId: 9913]
d1joga_ : (LEU8) (GLN67) [view usage] : a.24.16.2 |Four-helical up-and-down bundle |Nucleotidyltransferase substrate binding subunit/domain |Family 1 bi-partite nucleotidyltransferase subunit |Hypothetical protein HI0074 |Haemophilus influenzae [TaxId: 727]
d3oa1b_ : (LEU259) (ARG293) [view usage] : d.293.1.1 |Phosphoprotein M1, C-terminal domain |Phosphoprotein M1, C-terminal domain |Phosphoprotein M1, C-terminal domain |automated matches |Rabies virus strain pasteur vaccin [TaxId: 103929]
d1gu2b_ : (ASN78) (GLU119) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Cytochrome c'' |Methylophilus methylotrophus, strain w3a1 [TaxId: 17]
d2ebla_ : (CYS27) (ARG82) [view usage] : g.39.1.0 |Glucocorticoid receptor-like (DNA-binding domain) |Glucocorticoid receptor-like (DNA-binding domain) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3qyjb_ : (HIS149) (TRP179) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Nostoc sp. [TaxId: 103690]
d1tw6a_ : (LYS146) (HIS167) [view usage] : g.52.1.1 |Inhibitor of apoptosis (IAP) repeat |Inhibitor of apoptosis (IAP) repeat |Inhibitor of apoptosis (IAP) repeat |BIR-containing protein 7 (ML-IAP, livin) |Human (Homo sapiens) [TaxId: 9606]
d1rxra_ : (CYS152) (GLN210) [view usage] : g.39.1.2 |Glucocorticoid receptor-like (DNA-binding domain) |Glucocorticoid receptor-like (DNA-binding domain) |Nuclear receptor |Retinoid X receptor (RXR-alpha) DNA-binding domain |Human (Homo sapiens) [TaxId: 9606]
d1u19a_ : (GLN36) (HIS100) [view usage] : f.13.1.2 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |Rhodopsin-like |Rhodopsin |Cow (Bos taurus) [TaxId: 9913]
d2p4nb1 : (SER381) (ASP437) [view usage] : i.10.1.1 |Microtubule complexes |Microtubule complexes |Microtubule complexes |Tubulin:stathmin-like domain complex |Cow (Bos taurus) [TaxId: 9913]
d3qfmb_ : (ASN66) (HIS109) [view usage] : d.159.1.0 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 171101]
d1a8ha2 : (ARG167) (ALA195) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Methionyl-tRNA synthetase (MetRS) |Thermus thermophilus [TaxId: 274]
d1ni7a_ : (LEU113) (GLU149) [view usage] : d.224.1.1 |SufE/NifU |SufE/NifU |SufE-like |Hypothetical protein YgdK |Escherichia coli [TaxId: 562]
d3lhra_ : (ASP4) (TRP37) [view usage] : a.28.3.0 |Acyl carrier protein-like |Retrovirus capsid dimerization domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1rrvb_ : (SER127) (HIS190) [view usage] : c.87.1.5 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Gtf glycosyltransferase |TDP-vancosaminyltransferase GftD |Amycolatopsis orientalis [TaxId: 31958]
d3rycd2 : (SER381) (ASP437) [view usage] : d.79.2.1 |Bacillus chorismate mutase-like |Tubulin C-terminal domain-like |Tubulin, C-terminal domain |automated matches |Sheep (Ovis aries) [TaxId: 9940]
d2hxfa2 : (THR381) (GLU434) [view usage] : d.79.2.1 |Bacillus chorismate mutase-like |Tubulin C-terminal domain-like |Tubulin, C-terminal domain |Tubulin alpha-subunit |Pig (Sus scrofa) [TaxId: 9823]
d4gtma_ : (ASN329) (LYS366) [view usage] : a.118.6.1 |alpha-alpha superhelix |Protein prenylyltransferase |Protein prenylyltransferase |Protein farnesyltransferase alpha-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1jffa2 : (THR381) (GLU434) [view usage] : d.79.2.1 |Bacillus chorismate mutase-like |Tubulin C-terminal domain-like |Tubulin, C-terminal domain |Tubulin alpha-subunit |Cow (Bos taurus) [TaxId: 9913]
d3h3xq_ : (PRO385) (SER420) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |automated matches |Desulfovibrio fructosovorans [TaxId: 878]
d1kqfc_ : (ALA111) (TRP175) [view usage] : f.21.1.1 |Heme-binding four-helical bundle |Transmembrane di-heme cytochromes |Formate dehydrogenase N, cytochrome (gamma) subunit |Formate dehydrogenase N, cytochrome (gamma) subunit |Escherichia coli [TaxId: 562]
d1cx2a1 : (SER403) (GLN429) [view usage] : a.93.1.2 |Heme-dependent peroxidases |Heme-dependent peroxidases |Myeloperoxidase-like |Prostaglandin H2 synthase |Mouse (Mus musculus) [TaxId: 10090]
d3ryca2 : (THR381) (VAL437) [view usage] : d.79.2.1 |Bacillus chorismate mutase-like |Tubulin C-terminal domain-like |Tubulin, C-terminal domain |automated matches |Sheep (Ovis aries) [TaxId: 9940]
d4f6ra2 : (THR381) (VAL437) [view usage] : d.79.2.1 |Bacillus chorismate mutase-like |Tubulin C-terminal domain-like |Tubulin, C-terminal domain |automated matches |Sheep (Ovis aries) [TaxId: 9940]
d2hxfb2 : (SER381) (ASP437) [view usage] : d.79.2.1 |Bacillus chorismate mutase-like |Tubulin C-terminal domain-like |Tubulin, C-terminal domain |Tubulin beta-subunit |Pig (Sus scrofa) [TaxId: 9823]
d4hbia_ : (LYS23) (GLN83) [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin I |Ark clam (Scapharca inaequivalvis) [TaxId: 6561]
d2d54a2 : (ARG167) (ALA195) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |automated matches |Thermus thermophilus [TaxId: 274]
d1yrqh_ : (GLY384) (SER420) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |automated matches |Desulfovibrio fructosovorans [TaxId: 878]
d1gk3a_ : (GLY327) (SER399) [view usage] : a.127.1.2 |L-aspartase-like |L-aspartase-like |HAL/PAL-like |Histidine ammonia-lyase (HAL) |Pseudomonas putida [TaxId: 303]
d3qyja_ : (HIS149) (TRP179) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Nostoc sp. [TaxId: 103690]
d1tvkb2 : (SER371) (ASP427) [view usage] : d.79.2.1 |Bacillus chorismate mutase-like |Tubulin C-terminal domain-like |Tubulin, C-terminal domain |Tubulin beta-subunit |Cow (Bos taurus) [TaxId: 9913]
d2wzla_ : (PRO259) (GLU300) [view usage] : d.293.1.0 |Phosphoprotein M1, C-terminal domain |Phosphoprotein M1, C-terminal domain |automated matches |automated matches |Mokola virus [TaxId: 12538]
d3rycb2 : (SER381) (ALA438) [view usage] : d.79.2.1 |Bacillus chorismate mutase-like |Tubulin C-terminal domain-like |Tubulin, C-terminal domain |automated matches |Sheep (Ovis aries) [TaxId: 9940]
d1dw0a_ : (THR71) (GLN112) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |SHP, an oxygen binding cytochrome c |Rhodobacter sphaeroides [TaxId: 1063]
d3ryhc2 : (THR381) (VAL437) [view usage] : d.79.2.1 |Bacillus chorismate mutase-like |Tubulin C-terminal domain-like |Tubulin, C-terminal domain |automated matches |Sheep (Ovis aries) [TaxId: 9940]
d1k6ka_ : (VAL27) (THR66) [view usage] : a.174.1.1 |Double Clp-N motif |Double Clp-N motif |Double Clp-N motif |N-terminal, ClpS-binding domain of ClpA, an Hsp100 chaperone |Escherichia coli [TaxId: 562]
d1k6ka_ : (GLY105) (GLY141) [view usage] : a.174.1.1 |Double Clp-N motif |Double Clp-N motif |Double Clp-N motif |N-terminal, ClpS-binding domain of ClpA, an Hsp100 chaperone |Escherichia coli [TaxId: 562]
d1m8wa_ : (SER830) (ALA850) [view usage] : a.118.1.8 |alpha-alpha superhelix |ARM repeat |Pumilio repeat |Pumilio 1 |Human (Homo sapiens) [TaxId: 9606]
d1woya2 : (ARG162) (ALA195) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |automated matches |Thermus thermophilus [TaxId: 274]
d3ryha2 : (THR381) (VAL437) [view usage] : d.79.2.1 |Bacillus chorismate mutase-like |Tubulin C-terminal domain-like |Tubulin, C-terminal domain |automated matches |Sheep (Ovis aries) [TaxId: 9940]
d1f1ma_ : (THR151) (SER200) [view usage] : a.24.12.1 |Four-helical up-and-down bundle |Outer surface protein C (OspC) |Outer surface protein C (OspC) |Outer surface protein C (OspC) |Lyme disease spirochete (Borrelia burgdorferi), different strains [TaxId: 139]
d1jffb2 : (SER381) (ASP437) [view usage] : d.79.2.1 |Bacillus chorismate mutase-like |Tubulin C-terminal domain-like |Tubulin, C-terminal domain |Tubulin beta-subunit |Cow (Bos taurus) [TaxId: 9913]
d1vyia_ : (LEU259) (SER296) [view usage] : d.293.1.1 |Phosphoprotein M1, C-terminal domain |Phosphoprotein M1, C-terminal domain |Phosphoprotein M1, C-terminal domain |Phosphoprotein M1, C-terminal domain |Rabies virus, strain CVS-11 [TaxId: 11292]
d3pw8a_ : (THR148) (THR207) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Escherichia coli [TaxId: 511145]
d4fl4d_ : (SER33) (ARG81) [view usage] : a.139.1.0 |Type I dockerin domain |Type I dockerin domain |automated matches |automated matches |Clostridium thermocellum [TaxId: 1515]
d6hbia_ : (LYS23) (GLN83) [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin I |Ark clam (Scapharca inaequivalvis) [TaxId: 6561]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.69, c.94, d.159, d.58, a.118, c.26, a.93, a.127, e.18, c.87, a.25, f.21, d.79, a.1, f.13, g.52, i.10, a.3, a.91, a.24,
d.224, a.28, a.61, a.8, a.174, g.39, a.139, d.293, a.181