Tableau information
Concept source: d1g1ya3 amino acid (a.a.) range (PHE249)(GLY318)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PHE249) (GLY259) H1
(SER262) (PHE268) H2
(ASN300) (GLY318) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -112.9° H2
H3 147.0° -91.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1j0ja3 : (PHE252) (THR314) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Neopullulanase, central domain |Bacillus stearothermophilus [TaxId: 1422]
d2vzmb_ : (ASP16) (GLY39) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces venezuelae [TaxId: 54571]
d1hzta_ : (LEU144) (THR179) [view usage] : d.113.1.2 |Nudix |Nudix |IPP isomerase-like |Isopentenyl diphosphate isomerase |Escherichia coli [TaxId: 562]
d2a3sa_ : (THR25) (SER56) [view usage] : a.4.5.14 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Forkhead DNA-binding domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1r67a_ : (LEU144) (THR179) [view usage] : d.113.1.2 |Nudix |Nudix |IPP isomerase-like |Isopentenyl diphosphate isomerase |Escherichia coli [TaxId: 562]
d1lkia_ : (LEU22) (ALA61) [view usage] : a.26.1.1 |4-helical cytokines |4-helical cytokines |Long-chain cytokines |Leukemia inhibitory factor (LIF) |Mouse (Mus musculus) [TaxId: 10090]
d1rqea1 : (GLY309) (GLU334) [view usage] : a.5.7.2 |RuvA C-terminal domain-like |post-HMGL domain-like |Conserved carboxylase domain |Transcarboxylase 5S subunit, C-terminal domain |Propionibacterium freudenreichii shermanii [TaxId: 1752]
d1uh2a3 : (HIS272) (ILE332) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Maltogenic amylase, central domain |Thermoactinomyces vulgaris, TVAI [TaxId: 2026]
d1sqpf1 : (ASN40) (LYS109) [view usage] : f.27.1.1 |14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Cow (Bos taurus) [TaxId: 9913]
d1i10a2 : (SER209) (GLU228) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Lactate dehydrogenase |Human (Homo sapiens), muscle isoform (M chain) [TaxId: 9606]
d1od4a1 : (VAL1489) (PHE1526) [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Acetyl-coenzyme A carboxylase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1xv9b_ : (PHE307) (SER348) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Orphan nuclear receptor NR1I3 (CAR) |Human (Homo sapiens) [TaxId: 9606]
d1j0ha3 : (PHE252) (THR314) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Neopullulanase, central domain |Bacillus stearothermophilus [TaxId: 1422]
d4flsa1 : (ASP495) (ARG513) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Neisseria polysaccharea [TaxId: 489]
d1c4ka3 : (LEU572) (ASN588) [view usage] : d.125.1.1 |Ornithine decarboxylase C-terminal domain |Ornithine decarboxylase C-terminal domain |Ornithine decarboxylase C-terminal domain |Ornithine decarboxylase C-terminal domain |Lactobacillus sp., strain 30a [TaxId: 1591]
d2xrla2 : (SER126) (LEU204) [view usage] : a.121.1.1 |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |automated matches |Escherichia coli [TaxId: 562]
d2h8pc1 : (LEU24) (THR75) [view usage] : f.14.1.1 |Gated ion channels |Voltage-gated potassium channels |Voltage-gated potassium channels |Potassium channel protein |Streptomyces coelicolor [TaxId: 1902]
d1ir6a_ : (PRO207) (GLY256) [view usage] : c.107.1.2 |DHH phosphoesterases |DHH phosphoesterases |Exonuclease RecJ |Exonuclease RecJ |Thermus thermophilus [TaxId: 274]
d2cd8a_ : (ASP16) (GLY39) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces venezuelae [TaxId: 54571]
d1l0nf_ : (ASP41) (LYS109) [view usage] : f.27.1.1 |14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Cow (Bos taurus) [TaxId: 9913]
d4mcka_ : (PHE153) (GLN187) [view usage] : d.2.1.0 |Lysozyme-like |Lysozyme-like |automated matches |automated matches |Maize (Zea mays) [TaxId: 4577]
d1izka3 : (HIS272) (ILE332) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Maltogenic amylase, central domain |Thermoactinomyces vulgaris, TVAI [TaxId: 2026]
d1o7kb_ : (PHE44) (ARG70) [view usage] : d.189.1.1 |PX domain |PX domain |PX domain |p47phox NADPH oxidase |Human (Homo sapiens) [TaxId: 9606]
d1lj8a3 : (THR400) (ILE444) [view usage] : a.100.1.9 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |Mannitol 2-dehydrogenase |Mannitol 2-dehydrogenase |Pseudomonas fluorescens [TaxId: 294]
d2jpta_ : (SER29) (LYS59) [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |Calcyclin (S100) |Cow (Bos taurus), s100b [TaxId: 9913]
d1jf6a3 : (PHE249) (GLU316) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Maltogenic amylase, central domain |Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
d1smaa3 : (PHE252) (PHE320) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Maltogenic amylase, central domain |Thermus sp. [TaxId: 275]
d1o70a1 : (SER363) (ILE390) [view usage] : b.118.1.1 |FAS1 domain |FAS1 domain |FAS1 domain |Fasciclin I |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1od2a1 : (VAL1489) (PHE1526) [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Acetyl-coenzyme A carboxylase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1nfsa_ : (LEU144) (SER176) [view usage] : d.113.1.2 |Nudix |Nudix |IPP isomerase-like |Isopentenyl diphosphate isomerase |Escherichia coli [TaxId: 562]
d1x83a1 : (LEU144) (THR179) [view usage] : d.113.1.2 |Nudix |Nudix |IPP isomerase-like |Isopentenyl diphosphate isomerase |Escherichia coli [TaxId: 562]
d4flra1 : (ASP495) (ARG513) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Neisseria polysaccharea [TaxId: 489]
d1a23a_ : (VAL84) (ASN114) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |Disulfide-bond formation facilitator (DsbA) |Escherichia coli [TaxId: 562]
d4elzb_ : (THR451) (LEU492) [view usage] : e.11.1.1 |Type II DNA topoisomerase C-terminal domain-like |Type II DNA topoisomerase C-terminal domain-like |Type II DNA topoisomerase C-terminal domain-like |automated matches |Vibrio fischeri [TaxId: 312309]
d1o0la_ : (ASP9) (ARG56) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Apoptosis regulator Bcl-w |Human (Homo sapiens) [TaxId: 9606]
d1kq6a_ : (PHE44) (ARG70) [view usage] : d.189.1.1 |PX domain |PX domain |PX domain |p47phox NADPH oxidase |Human (Homo sapiens) [TaxId: 9606]
d2c6ha_ : (ASP16) (GLY39) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces venezuelae [TaxId: 54571]
d2whwa_ : (ASP16) (GLY39) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces venezuelae [TaxId: 54571]
d4elza_ : (GLU452) (ALA493) [view usage] : e.11.1.1 |Type II DNA topoisomerase C-terminal domain-like |Type II DNA topoisomerase C-terminal domain-like |Type II DNA topoisomerase C-terminal domain-like |automated matches |Vibrio fischeri [TaxId: 312309]
d1rfzd_ : (ARG58) (GLY95) [view usage] : a.195.1.1 |YutG-like |YutG-like |YutG-like |YutG homologue |Bacillus stearothermophilus [TaxId: 1422]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, a.104, c.14, c.47, d.2, c.107, e.11, a.123, a.100, a.4, a.39, d.162, f.1, d.113, a.26, f.27, a.121, b.118, d.189, a.5,
f.14, a.195, d.125