Tableau information
Concept source: d3bx3b_ amino acid (a.a.) range (GLY589)(GLU623)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY589) (GLU599) H1
(THR604) (ASP610) H2
(ASN614) (GLU623) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 106.4° H2
H3 -129.7° -117.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2gu2a1 : (PRO54) (LEU98) [view usage] : c.56.5.7 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |AstE/AspA-like |Aspartoacylase AspA |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2e22a1 : (PHE29) (THR108) [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |automated matches |Bacillus sp. [TaxId: 84635]
d2e22a1 : (ALA118) (GLN151) [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |automated matches |Bacillus sp. [TaxId: 84635]
d1mr1c_ : (ASP277) (GLU309) [view usage] : d.217.1.2 |SAND domain-like |SAND domain-like |SMAD4-binding domain of oncoprotein Ski |SMAD4-binding domain of oncoprotein Ski |Human (Homo sapiens) [TaxId: 9606]
d3sz3a_ : (ASP215) (ALA256) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |automated matches |Vibrio cholerae [TaxId: 243277]
d3omic_ : (PHE135) (SER201) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |automated matches |Rhodobacter sphaeroides [TaxId: 272943]
d1d2ra_ : (ASP209) (GLY250) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Tryptophanyl-tRNA synthetase (TrpRS) |Bacillus stearothermophilus [TaxId: 1422]
d1m57a_ : (PRO136) (MET215) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial aa3 type cytochrome c oxidase subunit I |Rhodobacter sphaeroides [TaxId: 1063]
d4im7a2 : (ARG363) (GLY408) [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Escherichia coli [TaxId: 199310]
d1kfia2 : (SER257) (ASP290) [view usage] : c.84.1.1 |Phosphoglucomutase, first 3 domains |Phosphoglucomutase, first 3 domains |Phosphoglucomutase, first 3 domains |Exocytosis-sensitive phosphoprotein, pp63/parafusin |Ciliate (Paramecium tetraurelia) [TaxId: 5888]
d3nh5a_ : (PRO55) (LEU99) [view usage] : c.56.5.0 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1vsao1 : (TYR76) (ALA116) [view usage] : a.144.2.1 |PABP domain-like |Ribosomal protein L20 |Ribosomal protein L20 |Ribosomal protein L20 |Thermus thermophilus [TaxId: 274]
d1kgqa_ : (MET1) (GLY41) [view usage] : b.81.1.2 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD |Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD |Mycobacterium bovis [TaxId: 1765]
d1x1ha1 : (GLU28) (THR108) [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |automated matches |Bacillus sp. [TaxId: 84635]
d2hgka1 : (THR2) (LYS66) [view usage] : a.29.17.1 |Bromodomain-like |YqcC-like |YqcC-like |Hypothetical protein YqcC |Escherichia coli [TaxId: 562]
d2nwwa1 : (LEU130) (MET169) [view usage] : f.49.1.1 |Proton glutamate symport protein |Proton glutamate symport protein |Proton glutamate symport protein |Proton glutamate symport protein |Pyrococcus horikoshii [TaxId: 53953]
d4hjrb_ : (LYS204) (LYS246) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |automated matches |Methanocaldococcus jannaschii [TaxId: 243232]
d1y8pa1 : (PRO13) (LEU66) [view usage] : a.29.5.1 |Bromodomain-like |alpha-ketoacid dehydrogenase kinase, N-terminal domain |alpha-ketoacid dehydrogenase kinase, N-terminal domain |Pyruvate dehydrogenase kinase |Human (Homo sapiens) [TaxId: 9606]
d4kxrb_ : (PRO7) (HIS101) [view usage] : a.25.4.2 |Ferritin-like |PE/PPE dimer-like |PPE |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d2qeqa2 : (ARG562) (SER616) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |West nile virus [TaxId: 11078]
d1ar1a_ : (PHE127) (ASN206) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial aa3 type cytochrome c oxidase subunit I |Paracoccus denitrificans [TaxId: 266]
d2vn6b_ : (SER16) (GLY59) [view usage] : a.139.1.0 |Type I dockerin domain |Type I dockerin domain |automated matches |automated matches |Clostridium cellulolyticum [TaxId: 1521]
d1vs6q1 : (SER74) (LEU116) [view usage] : a.144.2.1 |PABP domain-like |Ribosomal protein L20 |Ribosomal protein L20 |Ribosomal protein L20 |Escherichia coli [TaxId: 562]
d2bs2c_ : (ILE77) (PRO151) [view usage] : f.21.2.1 |Heme-binding four-helical bundle |Fumarate reductase respiratory complex transmembrane subunits |Fumarate reductase respiratory complex cytochrome b subunit, FrdC |automated matches |Wolinella succinogenes [TaxId: 844]
d3omnc_ : (PHE135) (SER201) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |automated matches |Rhodobacter sphaeroides [TaxId: 272943]
d1mlwa_ : (ILE112) (TYR155) [view usage] : d.178.1.1 |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Tryptophan hydroxylase |Human (Homo sapiens) [TaxId: 9606]
d1de4c1 : (PHE669) (GLY751) [view usage] : a.48.2.1 |N-cbl like |Transferrin receptor-like dimerisation domain |Transferrin receptor-like dimerisation domain |Transferrin receptor ectodomain, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d3g26a_ : (PRO199) (GLN226) [view usage] : a.28.3.1 |Acyl carrier protein-like |Retrovirus capsid dimerization domain-like |Retrovirus capsid protein C-terminal domain |automated matches |Rous sarcoma virus [TaxId: 11888]
d4ky0c_ : (LEU132) (ARG173) [view usage] : f.49.1.1 |Proton glutamate symport protein |Proton glutamate symport protein |Proton glutamate symport protein |automated matches |Thermococcus kodakarensis [TaxId: 69014]
d1j0ma1 : (GLU28) (THR108) [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Xanthan lyase |Bacillus sp. GL1 [TaxId: 84635]
d2hq8b_ : (SER50) (ASP112) [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Renilla muelleri [TaxId: 37510]
d2rdwa_ : (LEU168) (ILE213) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2bq4a_ : (SER26) (TRP47) [view usage] : a.138.1.0 |Multiheme cytochromes |Multiheme cytochromes |automated matches |automated matches |Desulfovibrio africanus [TaxId: 873]
d3om3a_ : (PHE135) (LEU213) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |automated matches |Rhodobacter sphaeroides [TaxId: 272943]
d3nfza_ : (PRO55) (LEU99) [view usage] : c.56.5.0 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1beaa_ : (VAL7) (PRO52) [view usage] : a.52.1.2 |Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |Proteinase/alpha-amylase inhibitors |Hageman factor/amylase inhibitor |Maize (Zea mays) [TaxId: 4577]
d3n9ia_ : (PRO225) (THR266) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |automated matches |Yersinia pestis [TaxId: 214092]
d3sgha_ : (PRO38) (ILE106) [view usage] : a.118.8.0 |alpha-alpha superhelix |TPR-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
d3bx3b_ : (GLY589) (GLU623) [view usage] : a.118.1.0 |alpha-alpha superhelix |ARM repeat |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, b.81, a.118, c.26, c.56, a.102, c.37, d.178, a.25, f.21, f.24, a.100, a.39, a.138, a.29, a.28, a.52, a.48, f.49, a.144,
c.84, a.139, d.217