Tableau information
Concept source: d4elza_ amino acid (a.a.) range (THR363)(ARG413)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR363) (ASN389) H1
(ASN389) (ALA400) H2
(THR402) (ARG413) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -79.4° H2
H3 98.2° 138.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2b0of1 : (LEU424) (LEU471) [view usage] : g.45.1.0 |ArfGap/RecO-like zinc finger |ArfGap/RecO-like zinc finger |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ijcf_ : (GLU6) (ASN46) [view usage] : a.152.1.3 |AhpD-like |AhpD-like |Atu0492-like |Hypothetical protein PA0269 |Pseudomonas aeruginosa [TaxId: 287]
d1gxjb_ : (SER500) (GLY539) [view usage] : d.215.1.1 |Smc hinge domain |Smc hinge domain |Smc hinge domain |Smc hinge domain |Thermotoga maritima [TaxId: 2336]
d3myrc_ : (SER185) (GLY213) [view usage] : e.19.1.0 |HydA/Nqo6-like |HydA/Nqo6-like |automated matches |automated matches |Allochromatium vinosum [TaxId: 1049]
d2f4mb_ : (HIS274) (ARG308) [view usage] : a.189.1.1 |XPC-binding domain |XPC-binding domain |XPC-binding domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2z5va_ : (SER77) (ILE106) [view usage] : c.23.2.0 |Flavodoxin-like |Toll/Interleukin receptor TIR domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2b0og1 : (HIS422) (GLY472) [view usage] : g.45.1.0 |ArfGap/RecO-like zinc finger |ArfGap/RecO-like zinc finger |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2m03a_ : (MET123) (ARG168) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1etpa1 : (ASP3) (GLY22) [view usage] : a.3.1.4 |Cytochrome c |Cytochrome c |Two-domain cytochrome c |Cytochrome c4 |Pseudomonas stutzeri [TaxId: 316]
d3k96a2 : (LEU243) (GLY278) [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Coxiella burnetii [TaxId: 227377]
d3kj0a_ : (VAL216) (LEU246) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4elya_ : (THR363) (ALA412) [view usage] : e.11.1.1 |Type II DNA topoisomerase C-terminal domain-like |Type II DNA topoisomerase C-terminal domain-like |Type II DNA topoisomerase C-terminal domain-like |automated matches |Shigella flexneri [TaxId: 623]
d2pfma_ : (PRO340) (VAL377) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d2ijci_ : (GLU6) (TYR39) [view usage] : a.152.1.3 |AhpD-like |AhpD-like |Atu0492-like |Hypothetical protein PA0269 |Pseudomonas aeruginosa [TaxId: 287]
d3fvrb_ : (VAL117) (ILE175) [view usage] : c.69.1.25 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetyl xylan esterase-like |automated matches |Bacillus pumilus [TaxId: 1408]
d2b0oh1 : (LEU424) (LEU471) [view usage] : g.45.1.0 |ArfGap/RecO-like zinc finger |ArfGap/RecO-like zinc finger |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ax3a1 : (ASN421) (VAL453) [view usage] : c.72.1.4 |Ribokinase-like |Ribokinase-like |YjeF C-terminal domain-like |Hypothetical protein TM0922, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d2r6gf2 : (PHE441) (VAL504) [view usage] : f.58.1.1 |MetI-like |MetI-like |MetI-like |Maltose transport system permease protein MalF |Escherichia coli [TaxId: 562]
d4olja_ : (VAL145) (TYR190) [view usage] : c.56.3.0 |Phosphorylase/hydrolase-like |Peptidyl-tRNA hydrolase-like |automated matches |automated matches |Acinetobacter baumannii [TaxId: 575584]
d2ijca1 : (GLU6) (ASN46) [view usage] : a.152.1.3 |AhpD-like |AhpD-like |Atu0492-like |Hypothetical protein PA0269 |Pseudomonas aeruginosa [TaxId: 287]
d1ukfa_ : (ASP113) (GLY166) [view usage] : d.3.1.10 |Cysteine proteinases |Cysteine proteinases |Avirulence protein Avrpph3 |Avirulence protein Avrpph3 |Pseudomonas syringae pv. phaseolicola [TaxId: 319]
d1pksa_ : (SER43) (GLU75) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain |Human (Homo sapiens) [TaxId: 9606]
d1c7sa3 : (ASP448) (GLU478) [view usage] : c.1.8.6 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-N-acetylhexosaminidase catalytic domain |Bacterial chitobiase (beta-N-acetylhexosaminidase) |Serratia marcescens [TaxId: 615]
d4hw2b_ : (THR205) (LEU246) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4j6cb_ : (GLY331) (ILE369) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Nocardia farcinica [TaxId: 247156]
d1txga1 : (GLY244) (GLY284) [view usage] : a.100.1.6 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |Glycerol-3-phosphate dehydrogenase |Glycerol-3-phosphate dehydrogenase |Archaeoglobus fulgidus [TaxId: 2234]
d3lida2 : (PRO240) (SER260) [view usage] : d.110.6.2 |Profilin-like |Sensory domain-like |YkuI C-terminal domain-like |GGDEF family protein VP0354 |Vibrio parahaemolyticus [TaxId: 670]
d4po5a_ : (GLY70) (THR107) [view usage] : a.1.1.0 |Globin-like |Globin-like |automated matches |automated matches |Synechocystis sp. [TaxId: 1111708]
d4mxra_ : (HIS153) (PHE172) [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |automated matches |Trypanosoma cruzi [TaxId: 5693]
d2ijcb_ : (GLU6) (ASN46) [view usage] : a.152.1.3 |AhpD-like |AhpD-like |Atu0492-like |Hypothetical protein PA0269 |Pseudomonas aeruginosa [TaxId: 287]
d4ot6a_ : (THR602) (GLU657) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4j20a_ : (ASP4) (GLN42) [view usage] : a.3.1.0 |Cytochrome c |Cytochrome c |automated matches |automated matches |Chlorobium tepidum [TaxId: 194439]
d1xrsa_ : (ASN10) (ASN70) [view usage] : c.1.19.4 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |D-lysine 5,6-aminomutase alpha subunit, KamD |D-lysine 5,6-aminomutase alpha subunit, KamD |Clostridium sticklandii [TaxId: 1511]
d4o0ta_ : (GLY442) (THR478) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1vf5b_ : (ASN118) (LEU155) [view usage] : f.32.1.1 |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Subunit IV of the cytochrome b6f complex |Mastigocladus laminosus [TaxId: 83541]
d3uuoa_ : (PRO465) (TYR519) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1by3a_ : (PRO321) (HIS339) [view usage] : f.4.3.3 |Transmembrane beta-barrels |Porins |Ligand-gated protein channel |Ferric hydroxamate uptake receptor FhuA |Escherichia coli [TaxId: 562]
d3rrba2 : (ASN421) (THR452) [view usage] : c.72.1.4 |Ribokinase-like |Ribokinase-like |YjeF C-terminal domain-like |Hypothetical protein TM0922, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d3fvra_ : (VAL117) (ILE175) [view usage] : c.69.1.25 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetyl xylan esterase-like |automated matches |Bacillus pumilus [TaxId: 1408]
d1bccc2 : (GLU272) (HIS309) [view usage] : f.32.1.1 |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Mitochondrial cytochrome b subunit, C-terminal domain |Chicken (Gallus gallus) [TaxId: 9031]
d3v92b2 : (SER171) (MET196) [view usage] : a.119.1.0 |Lipoxigenase |Lipoxigenase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2p7jb1 : (PRO214) (SER234) [view usage] : d.110.6.2 |Profilin-like |Sensory domain-like |YkuI C-terminal domain-like |GGDEF family protein VP0354 |Vibrio parahaemolyticus [TaxId: 670]
d1pv6a_ : (MET1) (LEU58) [view usage] : f.38.1.2 |MFS general substrate transporter |MFS general substrate transporter |LacY-like proton/sugar symporter |Lactose permease |Escherichia coli [TaxId: 562]
d4oq5b_ : (VAL216) (LEU246) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4p7bc_ : (VAL147) (PHE192) [view usage] : c.56.3.1 |Phosphorylase/hydrolase-like |Peptidyl-tRNA hydrolase-like |Peptidyl-tRNA hydrolase-like |automated matches |Salmonella enterica [TaxId: 99287]
d1bs2a3 : (ASN6) (ALA57) [view usage] : d.67.2.1 |RRF/tRNA synthetase additional domain-like |Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1be3c2 : (GLU271) (SER297) [view usage] : f.32.1.1 |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Mitochondrial cytochrome b subunit, C-terminal domain |Cow (Bos taurus) [TaxId: 9913]
d2fcaa1 : (ASP10) (GLY36) [view usage] : c.66.1.53 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |TrmB-like |tRNA (guanine-N(7)-)-methyltransferase TrmB |Bacillus subtilis [TaxId: 1423]
d2b0oe1 : (ASP423) (LEU471) [view usage] : g.45.1.0 |ArfGap/RecO-like zinc finger |ArfGap/RecO-like zinc finger |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4k29b_ : (MSE223) (PHE268) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Xanthobacter autotrophicus [TaxId: 78245]
d1bpxa4 : (PRO261) (GLY290) [view usage] : d.218.1.2 |Nucleotidyltransferase |Nucleotidyltransferase |DNA polymerase beta-like |DNA polymerase beta, catalytic (31 kD) fragment |Human (Homo sapiens) [TaxId: 9606]
d4hw3d_ : (GLY203) (LEU246) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1kdxa_ : (ASP616) (GLU665) [view usage] : a.12.1.1 |Kix domain of CBP (creb binding protein) |Kix domain of CBP (creb binding protein) |Kix domain of CBP (creb binding protein) |Kix domain of CBP (creb binding protein) |Mouse (Mus musculus) [TaxId: 10090]
d3dxta_ : (TRP300) (ASP341) [view usage] : b.82.2.14 |Double-stranded beta-helix |Clavaminate synthase-like |Histone demethylase core |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1gxja_ : (SER500) (LEU537) [view usage] : d.215.1.1 |Smc hinge domain |Smc hinge domain |Smc hinge domain |Smc hinge domain |Thermotoga maritima [TaxId: 2336]
d4elza_ : (THR363) (ARG413) [view usage] : e.11.1.1 |Type II DNA topoisomerase C-terminal domain-like |Type II DNA topoisomerase C-terminal domain-like |Type II DNA topoisomerase C-terminal domain-like |automated matches |Vibrio fischeri [TaxId: 312309]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, a.119, b.82, c.69, a.104, c.56, c.66, c.14, c.42, a.127, a.211, c.72, c.23, f.4, d.144, d.3, e.11, d.110, a.152, a.1,
a.100, b.34, d.67, a.3, f.1, e.19, d.218, f.58, d.215, a.12, a.189, g.45, f.32, f.38