Tableau information
Concept source: d1ou5a1 amino acid (a.a.) range (ASP165)(GLY203)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP165) (ILE179) H1
(ASP187) (ASN197) H2
(ASN197) (GLY203) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -142.1° H2
H3 -105.6° -55.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3vxia_ : (THR296) (GLY319) [view usage] : d.58.4.14 |Ferredoxin-like |Dimeric alpha+beta barrel |Dyp-type peroxidase-like |Decolorizing peroxidase DyP |Bjerkandera adusta [TaxId: 5331]
d1mwoa2 : (ASP244) (ASP277) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Bacterial alpha-amylase |Pyrococcus woesei [TaxId: 2262]
d4hl6a_ : (ASP274) (THR300) [view usage] : c.123.1.0 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |automated matches |automated matches |Escherichia coli [TaxId: 83333]
d1p60a_ : (SER129) (GLU171) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Deoxycytidine kinase |Human (Homo sapiens) [TaxId: 9606]
d3b1ua3 : (PRO494) (GLY558) [view usage] : d.126.1.5 |Pentein, beta/alpha-propeller |Pentein |Peptidylarginine deiminase Pad4, catalytic C-terminal domain |Peptidylarginine deiminase Pad4, catalytic C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d3dw8a_ : (TYR11) (LEU42) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Human (Homo sapiens) [TaxId: 9606]
d3dw8a_ : (GLY43) (GLY81) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Human (Homo sapiens) [TaxId: 9606]
d1ou5a1 : (ASP165) (GLY203) [view usage] : a.173.1.1 |Poly A polymerase C-terminal region-like |Poly A polymerase C-terminal region-like |Poly A polymerase C-terminal region-like |tRNA CCA-adding enzyme, C-terminal domains |Human (Homo sapiens), mitochondrial [TaxId: 9606]
d3zbyb_ : (PHE318) (VAL334) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d2o70c_ : (ILE3) (GLU23) [view usage] : a.288.1.1 |UraD-like |UraD-Like |UraD-like |OHCU decarboxylase, UraD |Zebrafish (Danio rerio) [TaxId: 7955]
d1g12a_ : (GLN135) (ASN162) [view usage] : d.92.1.12 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Fungal zinc peptidase |Fungal zinc peptidase |Grifola frondosa [TaxId: 5627]
d1jeqa1 : (SER560) (GLN608) [view usage] : a.140.2.1 |LEM/SAP HeH motif |SAP domain |SAP domain |DNA binding C-terminal domain of ku70 |Human (Homo sapiens) [TaxId: 9606]
d1or7a2 : (HIS0) (VAL41) [view usage] : a.177.1.1 |Sigma2 domain of RNA polymerase sigma factors |Sigma2 domain of RNA polymerase sigma factors |Sigma2 domain of RNA polymerase sigma factors |SigmaE factor (RpoE) |Escherichia coli [TaxId: 562]
d3vwxc2 : (GLN129) (ALA175) [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |House fly (Musca domestica) [TaxId: 7370]
d3deoa2 : (THR130) (ARG151) [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1x6ib_ : (SER236) (ARG283) [view usage] : a.218.1.0 |YgfY-like |YgfY-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
d2o70f_ : (ILE3) (GLU23) [view usage] : a.288.1.1 |UraD-like |UraD-Like |UraD-like |OHCU decarboxylase, UraD |Zebrafish (Danio rerio) [TaxId: 7955]
d1wvra2 : (ASP193) (ASN218) [view usage] : g.19.1.0 |Crisp domain-like |Crisp domain-like |automated matches |automated matches |Habu snake (Trimeresurus flavoviridis) [TaxId: 88087]
d4egmb_ : (SER95) (LEU116) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 316058]
d1ykea1 : (TYR112) (SER205) [view usage] : a.252.1.2 |Mediator hinge subcomplex-like |Mediator hinge subcomplex-like |MED7 hinge region |RNA polymerase II mediator complex protein MED7 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1s51a_ : (ALA168) (PHE230) [view usage] : f.13.1.1 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |Bacteriorhodopsin-like |Bacteriorhodopsin |Halobacterium salinarum [TaxId: 2242]
d1qoya_ : (SER55) (GLY180) [view usage] : h.4.4.1 |Antiparallel coiled-coil |Bacterial hemolysins |Hemolysin E (HlyE, ClyA, SheA) |Hemolysin E (HlyE, ClyA, SheA) |Escherichia coli [TaxId: 562]
d2bwja_ : (THR42) (GLY67) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3mw6a_ : (PRO75) (ALA124) [view usage] : a.136.1.1 |FinO-like |FinO-like |FinO-like |Hypothetical protein NMB1681 |Neisseria meningitidis [TaxId: 487]
d2hz2a_ : (ASP39) (GLU75) [view usage] : a.1.1.1 |Globin-like |Globin-like |Truncated hemoglobin |Protozoan/bacterial hemoglobin |Synechocystis sp. PCC 6803 [TaxId: 1148]
d1zorb_ : (PRO323) (PHE373) [view usage] : c.77.1.0 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d2fvca_ : (ALA504) (LYS531) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Hepatitis C virus [TaxId: 11103]
d2a7sa1 : (THR24) (LEU67) [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Propionyl-CoA carboxylase complex B subunit, PccB |Mycobacterium tuberculosis [TaxId: 1773]
d3mm1a_ : (THR296) (GLY319) [view usage] : d.58.4.14 |Ferredoxin-like |Dimeric alpha+beta barrel |Dyp-type peroxidase-like |Decolorizing peroxidase DyP |Bjerkandera adusta [TaxId: 5331]
d4hl6d_ : (ASP274) (LYS299) [view usage] : c.123.1.0 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |automated matches |automated matches |Escherichia coli [TaxId: 83333]
d1yfea_ : (THR328) (ILE391) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1ge6a_ : (GLN135) (ASN162) [view usage] : d.92.1.12 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Fungal zinc peptidase |Fungal zinc peptidase |Grifola frondosa [TaxId: 5627]
d1rpra_ : (LYS3) (GLY60) [view usage] : a.30.1.1 |ROP-like |ROP protein |ROP protein |ROP protein |Escherichia coli [TaxId: 562]
d1x6ja_ : (SER36) (ARG83) [view usage] : a.218.1.0 |YgfY-like |YgfY-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
d2qfyb_ : (ILE332) (GLY384) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1piya_ : (MET296) (TRP338) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Escherichia coli [TaxId: 562]
d2h4ta1 : (ARG554) (HIS584) [view usage] : c.43.1.0 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2qvja_ : (ASN190) (LYS223) [view usage] : a.260.1.1 |Rhabdovirus nucleoprotein-like |Rhabdovirus nucleoprotein-like |Rhabdovirus nucleocapsid protein |Nucleoprotein |Vesicular stomatitis indiana virus [TaxId: 11277]
d2xolb_ : (GLY-1) (GLY37) [view usage] : a.184.1.1 |TorD-like |TorD-like |TorD-like |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d4b9aa_ : (ILE135) (GLN158) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d3pt9a3 : (CYS1229) (TYR1260) [view usage] : c.66.1.26 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |C5 cytosine-specific DNA methylase, DCM |Methyltransferase domain from DNA methyltransferase 1 (DNMT1) |Mouse (Mus musculus) [TaxId: 10090]
d1aowa_ : (LYS245) (ASP278) [view usage] : a.65.1.1 |Annexin |Annexin |Annexin |Annexin IV |Cow (Bos taurus) [TaxId: 9913]
d4wz8c2 : (ASP2048) (LEU2096) [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d2ecpa_ : (LEU254) (GLU273) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Maltodextrin phosphorylase (MALP) |Escherichia coli [TaxId: 562]
d1y37a_ : (PRO131) (GLN155) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Burkholderia sp. [TaxId: 384033]
d1h2ub1 : (GLU28) (LYS65) [view usage] : a.118.1.14 |alpha-alpha superhelix |ARM repeat |MIF4G domain-like |CBP80, 80KDa nuclear cap-binding protein |Human (Homo sapiens) [TaxId: 9606]
d2jnta_ : (ASN9) (GLY29) [view usage] : a.118.21.1 |alpha-alpha superhelix |Chemosensory protein Csp2 |Chemosensory protein Csp2 |automated matches |Silkworm (Bombyx mori) [TaxId: 7091]
d3pmna3 : (PHE499) (GLY564) [view usage] : d.218.1.2 |Nucleotidyltransferase |Nucleotidyltransferase |DNA polymerase beta-like |DNA polymerase lambda |Human (Homo sapiens) [TaxId: 9606]
d1f4ua_ : (THR67) (SER88) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cyp119 |Sulfolobus solfataricus [TaxId: 2287]
d1uuca_ : (LYS1) (LYS53) [view usage] : g.68.1.2 |Kazal-type serine protease inhibitors |Kazal-type serine protease inhibitors |Serine proteinase inhibitor lekti |Serine proteinase inhibitor lekti |Human (Homo sapiens) [TaxId: 9606]
d1k28a3 : (ASN130) (LEU152) [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Tail-associated lysozyme gp5, catalytic domain |Bacteriophage T4 [TaxId: 10665]
d1kmda_ : (ARG78) (PHE117) [view usage] : d.189.1.1 |PX domain |PX domain |PX domain |Vam7p |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1yiga1 : (ASP191) (ILE255) [view usage] : a.245.1.1 |EB1 dimerisation domain-like |EB1 dimerisation domain-like |EB1 dimerisation domain-like |Microtubule-associated protein EB1, C-terminal dimerization domain |Human (Homo sapiens) [TaxId: 9606]
d3mw6b_ : (PRO75) (GLN113) [view usage] : a.136.1.1 |FinO-like |FinO-like |FinO-like |Hypothetical protein NMB1681 |Neisseria meningitidis [TaxId: 487]
d1eb6a_ : (TYR148) (LEU175) [view usage] : d.92.1.12 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Fungal zinc peptidase |Fungal zinc peptidase |Aspergillus oryzae, deuterolysin [TaxId: 5062]
d3hkya_ : (ALA504) (ARG531) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Hepatitis C virus [TaxId: 11103]
d1x6ia_ : (SER36) (ARG83) [view usage] : a.218.1.0 |YgfY-like |YgfY-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.1, c.123, c.69, a.104, d.58, a.118, c.66, d.92, c.77, a.65, c.14, a.127, c.37, d.2, c.87, d.126, c.43, d.211, a.25,
a.1, f.13, a.45, a.288, d.218, h.4, a.136, a.184, a.177, a.218, g.68, d.189, a.260, a.140, a.173, a.30, g.19, a.252, a.245