Tableau information
Concept source: d1nz6b_ amino acid (a.a.) range (ASN117)(VAL145)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN117) (THR124) H1
(THR124) (LEU129) H2
(GLY140) (VAL145) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -55.8° H2
H3 139.6° 118.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4kzoa_ : (LYS350) (SER415) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1mhyb_ : (ASP353) (TYR393) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Methane monooxygenase hydrolase beta subunit |Methylosinus trichosporium [TaxId: 426]
d1g7va_ : (VAL200) (GLY232) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) |Escherichia coli [TaxId: 562]
d2wj2b_ : (VAL287) (SER321) [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3dblf_ : (ASP253) (ARG287) [view usage] : c.111.1.2 |Activating enzymes of the ubiquitin-like proteins |Activating enzymes of the ubiquitin-like proteins |Ubiquitin activating enzymes (UBA) |UBA3 |Human (Homo sapiens) [TaxId: 9606]
d4kqga_ : (GLY176) (LYS237) [view usage] : c.39.1.1 |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |automated matches |Salmonella enterica [TaxId: 99287]
d1dpca_ : (ILE443) (PRO482) [view usage] : c.43.1.1 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |CAT-like |Dihydrolipoamide acetyltransferase |Azotobacter vinelandii [TaxId: 354]
d4kp6a_ : (SER236) (ILE273) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b |Human (Homo sapiens) [TaxId: 9606]
d2jexa_ : (LEU77) (SER104) [view usage] : b.91.1.0 |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |automated matches |automated matches |Bovine papillomavirus type 1 [TaxId: 10559]
d1o20a_ : (CYS289) (THR309) [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Gamma-glutamyl phosphate reductase |Thermotoga maritima [TaxId: 2336]
d1svla_ : (THR356) (LEU398) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |Papillomavirus large T antigen helicase domain |Simian virus 40 [TaxId: 10633]
d1mt5a_ : (VAL287) (SER321) [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Fatty acid amide hydrolase (oleamide hydrolase) |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2l50a_ : (THR6) (ASN47) [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1cnoa_ : (LYS36) (ASN82) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Cytochrome c552 |Pseudomonas nautica [TaxId: 2743]
d1o2db_ : (SER320) (LEU357) [view usage] : e.22.1.2 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Iron-containing alcohol dehydrogenase |Alcohol dehydrogenase TM0920 |Thermotoga maritima [TaxId: 2336]
d1sora_ : (SER126) (GLY175) [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |Aquaporin-0 |Sheep (Ovis aries) [TaxId: 9940]
d1s7la_ : (VAL21) (GLY65) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Salmonella typhimurium [TaxId: 99287]
d3m3ta_ : (THR226) (GLY251) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |SARS coronavirus [TaxId: 227859]
d1fyzc_ : (GLU350) (LEU388) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Methane monooxygenase hydrolase beta subunit |Methylococcus capsulatus [TaxId: 414]
d2ns1a_ : (ARG124) (LEU181) [view usage] : f.44.1.0 |Ammonium transporter |Ammonium transporter |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1dpda_ : (ILE443) (PRO482) [view usage] : c.43.1.1 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |CAT-like |Dihydrolipoamide acetyltransferase |Azotobacter vinelandii [TaxId: 354]
d2vkdb_ : (LEU137) (LYS174) [view usage] : c.68.1.22 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Glycosylating toxin catalytic domain-like |automated matches |Clostridium sordellii [TaxId: 1505]
d1ig0b2 : (PRO141) (SER175) [view usage] : c.100.1.1 |Thiamin pyrophosphokinase, catalytic domain |Thiamin pyrophosphokinase, catalytic domain |Thiamin pyrophosphokinase, catalytic domain |Thiamin pyrophosphokinase, catalytic domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1rdfa_ : (PHE23) (LYS47) [view usage] : c.108.1.3 |HAD-like |HAD-like |Phosphonoacetaldehyde hydrolase-like |Phosphonoacetaldehyde hydrolase |Bacillus cereus [TaxId: 1396]
d1gyoa_ : (GLY67) (GLU105) [view usage] : a.138.1.1 |Multiheme cytochromes |Multiheme cytochromes |Cytochrome c3-like |Cytochrome c3 |Desulfovibrio gigas, di-tetraheme cytochrome c3 [TaxId: 879]
d2r6gf2 : (SER329) (LEU379) [view usage] : f.58.1.1 |MetI-like |MetI-like |MetI-like |Maltose transport system permease protein MalF |Escherichia coli [TaxId: 562]
d3ouqa2 : (THR128) (HIS158) [view usage] : a.138.1.0 |Multiheme cytochromes |Multiheme cytochromes |automated matches |automated matches |Geobacter sulfurreducens [TaxId: 35554]
d4kqfa_ : (GLY176) (LYS237) [view usage] : c.39.1.1 |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) |automated matches |Salmonella enterica [TaxId: 99287]
d3nvia_ : (LEU293) (TYR318) [view usage] : a.183.1.0 |Nop domain |Nop domain |automated matches |automated matches |Pyrococcus furiosus [TaxId: 186497]
d1g7ua_ : (VAL200) (GLY232) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) |Escherichia coli [TaxId: 562]
d1ft6a_ : (LYS29) (VAL65) [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |Cytochrome c554 |Nitrosomonas europaea [TaxId: 915]
d1maba3 : (ASP270) (ALA310) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Central domain of alpha subunit of F1 ATP synthase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1r88a_ : (THR179) (ASP211) [view usage] : c.69.1.3 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Mycobacterial antigens |Antigen pt51/mpb51 |Mycobacterium tuberculosis [TaxId: 1773]
d2bi4a_ : (ILE350) (TRP383) [view usage] : e.22.1.2 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Iron-containing alcohol dehydrogenase |automated matches |Escherichia coli [TaxId: 562]
d1fz5d_ : (LYS349) (ALA386) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Methane monooxygenase hydrolase beta subunit |Methylococcus capsulatus [TaxId: 414]
d3owod_ : (VAL350) (PHE383) [view usage] : e.22.1.0 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |automated matches |automated matches |Zymomonas mobilis [TaxId: 542]
d1kfda1 : (MET458) (ALA477) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of prokaryotic DNA polymerase |Escherichia coli [TaxId: 562]
d1dpba_ : (ILE443) (PRO482) [view usage] : c.43.1.1 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |CAT-like |Dihydrolipoamide acetyltransferase |Azotobacter vinelandii [TaxId: 354]
d1f61a_ : (ALA10) (GLN39) [view usage] : c.1.12.7 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |Phosphoenolpyruvate mutase/Isocitrate lyase-like |Isocitrate lyase |Mycobacterium tuberculosis [TaxId: 1773]
d2jeua_ : (LEU77) (SER98) [view usage] : b.91.1.0 |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |automated matches |automated matches |Bovine papillomavirus type 1 [TaxId: 10559]
d2id3a2 : (ASP156) (GLY198) [view usage] : a.121.1.1 |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Putative transcriptional regulator SCO5951 |Streptomyces coelicolor [TaxId: 1902]
d3bxua_ : (LYS43) (HIS69) [view usage] : a.138.1.1 |Multiheme cytochromes |Multiheme cytochromes |Cytochrome c3-like |automated matches |Geobacter sulfurreducens
d3m02a2 : (ASN223) (TYR278) [view usage] : a.128.1.3 |Terpenoid synthases |Terpenoid synthases |Terpenoid cyclase C-terminal domain |automated matches |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d1hx9a2 : (ASN222) (TYR278) [view usage] : a.128.1.3 |Terpenoid synthases |Terpenoid synthases |Terpenoid cyclase C-terminal domain |5-Epi-aristolochene synthase |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d2pbla1 : (LEU171) (SER194) [view usage] : c.69.1.2 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase |Uncharacterized protein TM1040_2492 |Silicibacter sp. tm1040 [TaxId: 292414]
d1eaaa_ : (ILE443) (PRO482) [view usage] : c.43.1.1 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |CAT-like |Dihydrolipoamide acetyltransferase |Azotobacter vinelandii [TaxId: 354]
d1tpka_ : (PRO24) (GLY45) [view usage] : g.14.1.1 |Kringle-like |Kringle-like |Kringle modules |Plasminogen |Human (Homo sapiens) [TaxId: 9606]
d3owoa_ : (VAL350) (PHE383) [view usage] : e.22.1.0 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |automated matches |automated matches |Zymomonas mobilis [TaxId: 542]
d3ag7a_ : (ILE571) (ILE597) [view usage] : a.2.3.0 |Long alpha-hairpin |Chaperone J-domain |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2vyaa_ : (GLU288) (SER321) [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2hv2a2 : (SER157) (ASN192) [view usage] : d.108.1.10 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |EF1021-like |Hypothetical protein EF1021 |Enterococcus faecalis [TaxId: 1351]
d2bq4b_ : (PHE77) (ASN114) [view usage] : a.138.1.0 |Multiheme cytochromes |Multiheme cytochromes |automated matches |automated matches |Desulfovibrio africanus [TaxId: 873]
d1f48a1 : (HIS148) (SER194) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Arsenite-translocating ATPase ArsA |Escherichia coli [TaxId: 562]
d1t33a2 : (ASP162) (GLN220) [view usage] : a.121.1.1 |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Putative transcriptional repressor YbiH |Salmonella typhimurium [TaxId: 90371]
d3brqb_ : (SER149) (ALA176) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2ihwa_ : (LEU223) (PRO262) [view usage] : c.43.1.0 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |automated matches |automated matches |Cow (Bos taurus) [TaxId: 9913]
d3khya2 : (ALA327) (SER353) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Francisella tularensis [TaxId: 119856]
d1r71d_ : (GLU225) (LEU250) [view usage] : a.4.14.1 |DNA/RNA-binding 3-helical bundle |KorB DNA-binding domain-like |KorB DNA-binding domain-like |Transcriptional repressor protein KorB DNA-binding domain |Escherichia coli [TaxId: 562]
d2bq4a_ : (PHE77) (ASN114) [view usage] : a.138.1.0 |Multiheme cytochromes |Multiheme cytochromes |automated matches |automated matches |Desulfovibrio africanus [TaxId: 873]
d3qkvb_ : (VAL287) (SER321) [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4i0ua2 : (LYS286) (LYS346) [view usage] : f.17.3.1 |Transmembrane helix hairpin |Magnesium transport protein CorA, transmembrane region |Magnesium transport protein CorA, transmembrane region |Magnesium transport protein CorA |Thermotoga maritima [TaxId: 243274]
d1q6ja_ : (VAL249) (ILE281) [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), 1B [TaxId: 9606]
d1ei1a1 : (THR280) (GLU317) [view usage] : d.14.1.3 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |DNA gyrase/MutL, second domain |DNA gyrase B |Escherichia coli [TaxId: 562]
d2iv0a_ : (LYS364) (LEU412) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d2osda1 : (MSE29) (SER64) [view usage] : d.278.1.3 |Ligand-binding domain in the NO signalling and Golgi transport |Ligand-binding domain in the NO signalling and Golgi transport |MJ1460-like |Hypothetical protein MJ1460 |Methanococcus jannaschii [TaxId: 2190]
d2nuua_ : (TRP135) (GLY183) [view usage] : f.44.1.0 |Ammonium transporter |Ammonium transporter |automated matches |automated matches |Escherichia coli [TaxId: 562]
d2pblb_ : (LEU171) (SER194) [view usage] : c.69.1.2 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase |Uncharacterized protein TM1040_2492 |Silicibacter sp. tm1040 [TaxId: 292414]
d1hxga2 : (ASN222) (VAL277) [view usage] : a.128.1.3 |Terpenoid synthases |Terpenoid synthases |Terpenoid cyclase C-terminal domain |5-Epi-aristolochene synthase |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d3n0gb2 : (GLN267) (ALA322) [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Populus tremula [TaxId: 80863]
d1bcca1 : (GLU123) (LYS176) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Cytochrome bc1 core subunit 1 |Chicken (Gallus gallus) [TaxId: 9031]
d2z22a_ : (ASN266) (ILE312) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Yersinia pestis [TaxId: 214092]
d1fyzd_ : (LYS349) (ALA386) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Methane monooxygenase hydrolase beta subunit |Methylococcus capsulatus [TaxId: 414]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.69, c.94, c.68, c.108, c.82, a.128, b.47, c.117, c.77, c.93, c.45, a.211, e.22, c.39, c.37, d.185, c.55, d.14, d.108,
c.43, a.25, d.278, c.111, b.91, a.4, a.39, a.138, a.3, f.19, c.100, f.58, f.44, a.2, a.121, g.14, f.17, a.183