Tableau information
Concept source: d1gwta_ amino acid (a.a.) range (ILE180)(GLN240)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ILE180) (LEU184) H1
(ASN198) (CYS209) H2
(LYS232) (GLN240) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -111.3° H2
H3 33.6° -108.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1omra_ : (GLU169) (GLU199) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Recoverin |Cow (Bos taurus) [TaxId: 9913]
d4pj0c_ : (PRO206) (ALA263) [view usage] : f.55.1.1 |Photosystem II antenna protein-like |Photosystem II antenna protein-like |Photosystem II antenna protein-like |automated matches |Thermosynechococcus elongatus [TaxId: 197221]
d4btjb_ : (SER231) (ILE266) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4mlwa_ : (GLU169) (LYS198) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Recoverin |Cow (Bos taurus) [TaxId: 9913]
d1mhyb_ : (VAL303) (ASP353) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Methane monooxygenase hydrolase beta subunit |Methylosinus trichosporium [TaxId: 426]
d1orpa_ : (TRP174) (ARG213) [view usage] : a.96.1.1 |DNA-glycosylase |DNA-glycosylase |Endonuclease III |Endonuclease III |Escherichia coli [TaxId: 562]
d1dysa_ : (PRO232) (GLY258) [view usage] : c.6.1.1 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |Glycosyl hydrolases family 6, cellulases |Cellobiohydrolase II (Cel6) |Humicola insolens, Cel6b [TaxId: 34413]
d3kd2a_ : (ASP158) (ILE192) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208963]
d1gwta_ : (ILE180) (GLN240) [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Plant peroxidase |Horseradish (Armoracia rusticana) [TaxId: 3704]
d1crxa2 : (ILE320) (ASP341) [view usage] : d.163.1.1 |DNA breaking-rejoining enzymes |DNA breaking-rejoining enzymes |Lambda integrase-like, catalytic core |Cre recombinase |Bacteriophage P1 [TaxId: 10678]
d3izbm_ : (ASN87) (GLY130) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3efpb_ : (ASN9) (THR62) [view usage] : a.184.1.1 |TorD-like |TorD-like |TorD-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4dmhb_ : (ASP158) (ILE192) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208963]
d1e6va1 : (TYR478) (ALA517) [view usage] : a.89.1.1 |Methyl-coenzyme M reductase alpha and beta chain C-terminal domain |Methyl-coenzyme M reductase alpha and beta chain C-terminal domain |Methyl-coenzyme M reductase alpha and beta chain C-terminal domain |Alpha chain |Methanopyrus kandleri [TaxId: 2320]
d2chla_ : (SER217) (LEU252) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2dn9a_ : (ASN40) (GLY73) [view usage] : a.2.3.0 |Long alpha-hairpin |Chaperone J-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3u5cp_ : (LEU22) (ALA46) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
d1nx9a2 : (GLY292) (ALA316) [view usage] : c.69.1.21 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |PepX catalytic domain-like |Alpha-amino acid ester hydrolase |Acetobacter pasteurianus [TaxId: 438]
d3mw6a_ : (THR5) (PHE41) [view usage] : a.136.1.1 |FinO-like |FinO-like |FinO-like |Hypothetical protein NMB1681 |Neisseria meningitidis [TaxId: 487]
d1sqqk1 : (GLY7) (PHE52) [view usage] : f.23.15.1 |Single transmembrane helix |Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Cow (Bos taurus) [TaxId: 9913]
d1d6qa_ : (SER80) (ARG115) [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
d1dz4a_ : (PRO175) (ALA224) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450-CAM |Pseudomonas putida [TaxId: 303]
d2hbka2 : (SER341) (ARG399) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exosome complex exonuclease RRP6 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1ejia_ : (ASP11) (ARG45) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Serine hydroxymethyltransferase |Mouse (Mus musculus) [TaxId: 10090]
d1kqfc_ : (GLY178) (GLU215) [view usage] : f.21.1.1 |Heme-binding four-helical bundle |Transmembrane di-heme cytochromes |Formate dehydrogenase N, cytochrome (gamma) subunit |Formate dehydrogenase N, cytochrome (gamma) subunit |Escherichia coli [TaxId: 562]
d4hokm_ : (SER181) (LEU216) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3efpa_ : (PHE10) (THR62) [view usage] : a.184.1.1 |TorD-like |TorD-like |TorD-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2gica1 : (VAL375) (GLU419) [view usage] : a.260.1.1 |Rhabdovirus nucleoprotein-like |Rhabdovirus nucleoprotein-like |Rhabdovirus nucleocapsid protein |Nucleoprotein |Vesicular stomatitis indiana virus [TaxId: 11277]
d1vzaa_ : (ILE71) (PRO99) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Lactobacillus casei [TaxId: 1582]
d1e3ma1 : (PHE400) (THR458) [view usage] : a.113.1.1 |DNA repair protein MutS, domain III |DNA repair protein MutS, domain III |DNA repair protein MutS, domain III |DNA repair protein MutS, domain III |Escherichia coli [TaxId: 562]
d4utpa_ : (HIS139) (LYS166) [view usage] : c.92.2.2 |Chelatase-like |"Helical backbone" metal receptor |TroA-like |automated matches |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1prha1 : (SER541) (THR572) [view usage] : a.93.1.2 |Heme-dependent peroxidases |Heme-dependent peroxidases |Myeloperoxidase-like |Prostaglandin H2 synthase |Sheep (Ovis aries) [TaxId: 9940]
d3cw0a_ : (PHE10) (THR62) [view usage] : a.184.1.1 |TorD-like |TorD-like |TorD-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4e2fa2 : (ASP236) (HIS255) [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Escherichia coli [TaxId: 562]
d2jnua_ : (GLU91) (LEU131) [view usage] : a.91.1.0 |Regulator of G-protein signaling, RGS |Regulator of G-protein signaling, RGS |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3jr6a_ : (SER142) (LEU170) [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
d3puhb1 : (PRO212) (SER239) [view usage] : c.69.1.21 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |PepX catalytic domain-like |automated matches |Rhodococcus sp. [TaxId: 104109]
d1afwb1 : (SER170) (PHE197) [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Thiolase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1e6vb1 : (ASP418) (ALA441) [view usage] : a.89.1.1 |Methyl-coenzyme M reductase alpha and beta chain C-terminal domain |Methyl-coenzyme M reductase alpha and beta chain C-terminal domain |Methyl-coenzyme M reductase alpha and beta chain C-terminal domain |Beta chain |Methanopyrus kandleri [TaxId: 2320]
d3ld6b_ : (SER235) (ASP287) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1xr4a1 : (GLY23) (ARG39) [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Putative citrate lyase alpha chain, citF2 |Salmonella typhimurium [TaxId: 90371]
d1t77a1 : (LEU2262) (TRP2291) [view usage] : a.169.1.1 |BEACH domain |BEACH domain |BEACH domain |Lipopolysaccharide-responsive and beige-like anchor protein LRBA |Human (Homo sapiens) [TaxId: 9606]
d1fqjb_ : (PHE313) (VAL343) [view usage] : a.91.1.1 |Regulator of G-protein signaling, RGS |Regulator of G-protein signaling, RGS |Regulator of G-protein signaling, RGS |RGS9, RGS domain |Cow (Bos taurus) [TaxId: 9913]
d1sqvk_ : (LEU2) (PRO46) [view usage] : f.23.15.1 |Single transmembrane helix |Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |automated matches |Cow (Bos taurus) [TaxId: 9913]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.67, c.69, a.104, c.6, i.1, c.92, d.117, c.124, a.93, d.144, c.55, d.2, c.95, a.96, c.78, a.25, f.21, a.39, a.91, a.136,
a.184, a.113, f.23, a.2, a.89, a.260, f.55, d.163, a.169