Tableau information
Concept source: d1e7pc_ amino acid (a.a.) range (GLY121)(PRO156)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY121) (PHE137) H1
(PHE137) (THR149) H2
(GLN150) (PRO156) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -48.9° H2
H3 122.7° -98.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1gl4a1 : (VAL450) (THR482) [view usage] : d.22.1.2 |GFP-like |GFP-like |Domain G2 of nidogen-1 |Domain G2 of nidogen-1 |Mouse (Mus musculus) [TaxId: 10090]
d2pg6b_ : (ASP192) (LEU230) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1xida_ : (LEU347) (ARG368) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Streptomyces rubiginosus [TaxId: 1929]
d1jb0l_ : (THR19) (LYS64) [view usage] : f.31.1.1 |Photosystem I reaction center subunit XI, PsaL |Photosystem I reaction center subunit XI, PsaL |Photosystem I reaction center subunit XI, PsaL |Photosystem I reaction center subunit XI, PsaL |Synechococcus elongatus [TaxId: 32046]
d2jn6a1 : (SER59) (ALA80) [view usage] : a.4.1.19 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |Cgl2762-like |Uncharacterized protein Cgl2762 |Corynebacterium glutamicum [TaxId: 1718]
d1lwha2 : (VAL362) (ARG391) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |4-alpha-glucanotransferase |Thermotoga maritima [TaxId: 2336]
d1e7pc_ : (GLY121) (PRO156) [view usage] : f.21.2.1 |Heme-binding four-helical bundle |Fumarate reductase respiratory complex transmembrane subunits |Fumarate reductase respiratory complex cytochrome b subunit, FrdC |Fumarate reductase respiratory complex cytochrome b subunit, FrdC |Wolinella succinogenes [TaxId: 844]
d3kw4a_ : (PRO193) (LYS225) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Mammalian cytochrome p450 2b4 |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d2bmoa2 : (GLU336) (ILE379) [view usage] : d.129.3.3 |TBP-like |Bet v1-like |Ring hydroxylating alpha subunit catalytic domain |Nitrobenzene dioxygenase alpha subunit, NBDO-alpha |Comamonas sp. JS765 [TaxId: 58226]
d2oeqb_ : (LEU5) (GLY59) [view usage] : a.281.1.2 |YheA-like |YheA/YmcA-like |YheA-like |automated matches |Geobacillus stearothermophilus [TaxId: 1422]
d1uh2a3 : (ASP524) (GLY554) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Maltogenic amylase, central domain |Thermoactinomyces vulgaris, TVAI [TaxId: 2026]
d2bk9a_ : (ASN2) (PRO36) [view usage] : a.1.1.0 |Globin-like |Globin-like |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2ekpa_ : (THR179) (ILE199) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d1izja3 : (ASP524) (THR553) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Maltogenic amylase, central domain |Thermoactinomyces vulgaris, TVAI [TaxId: 2026]
d2b24a2 : (PRO347) (GLY391) [view usage] : d.129.3.3 |TBP-like |Bet v1-like |Ring hydroxylating alpha subunit catalytic domain |Naphthalene 1,2-dioxygenase alpha subunit, C-domain |Rhodococcus sp. [TaxId: 92694]
d1ad6a_ : (PHE473) (ASP511) [view usage] : a.74.1.3 |Cyclin-like |Cyclin-like |Retinoblastoma tumor suppressor domains |Retinoblastoma tumor suppressor domains |Human (Homo sapiens) [TaxId: 9606]
d1pprm1 : (ASP1) (GLN30) [view usage] : a.131.1.1 |Peridinin-chlorophyll protein |Peridinin-chlorophyll protein |Peridinin-chlorophyll protein |Peridinin-chlorophyll protein |Dinoflagellate (Amphidinium carterae) [TaxId: 2961]
d2iazc_ : (ILE4) (ALA55) [view usage] : a.281.1.2 |YheA-like |YheA/YmcA-like |YheA-like |Hypothetical protein SP1372 |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1oadb_ : (LEU347) (ARG368) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Streptomyces rubiginosus [TaxId: 1929]
d1h16a_ : (PRO131) (LYS161) [view usage] : c.7.1.1 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |PFL-like |Pyruvate formate-lyase, PFL |Escherichia coli [TaxId: 562]
d2btwa1 : (ALA90) (VAL112) [view usage] : d.3.1.14 |Cysteine proteinases |Cysteine proteinases |Phytochelatin synthase |Primitive phytochelatin synthase |Nostoc sp. PCC 7120 [TaxId: 103690]
d2oeqc_ : (LEU5) (GLY59) [view usage] : a.281.1.2 |YheA-like |YheA/YmcA-like |YheA-like |automated matches |Geobacillus stearothermophilus [TaxId: 1422]
d2sspe_ : (GLU87) (HIS115) [view usage] : c.18.1.1 |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase |Uracil-DNA glycosylase |Human (Homo sapiens) [TaxId: 9606]
d2ot2a1 : (ASN60) (GLY87) [view usage] : b.40.14.1 |OB-fold |HupF/HypC-like |HupF/HypC-like |Hydrogenase expression/formation protein HypC |Escherichia coli [TaxId: 562]
d3inqa_ : (SER4) (GLN111) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1rz4a2 : (ALA2) (ASN22) [view usage] : a.118.1.18 |alpha-alpha superhelix |ARM repeat |Eukaryotic translation initiation factor 3 subunit 12, eIF3k, N-terminal domain |Eukaryotic translation initiation factor 3 subunit 12, eIF3k, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1izka3 : (ASP524) (GLY554) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Maltogenic amylase, central domain |Thermoactinomyces vulgaris, TVAI [TaxId: 2026]
d1xd4a1 : (GLN367) (ALA404) [view usage] : a.87.1.1 |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |Son of sevenless-1 (sos-1) |Human (Homo sapiens) [TaxId: 9606]
d2d0fa3 : (ASP524) (GLY554) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Thermoactinomyces vulgaris [TaxId: 2026]
d2avwa_ : (ASN87) (GLU120) [view usage] : d.3.1.12 |Cysteine proteinases |Cysteine proteinases |IgG-specific endopeptidase IdeS (Sib38) |automated matches |Streptococcus pyogenes [TaxId: 293653]
d1jkya3 : (MET264) (GLN297) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Anthrax toxin lethal factor, middle domain |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d2oeqd_ : (PRO4) (GLY59) [view usage] : a.281.1.2 |YheA-like |YheA/YmcA-like |YheA-like |automated matches |Geobacillus stearothermophilus [TaxId: 1422]
d1mlwa_ : (THR270) (LEU298) [view usage] : d.178.1.1 |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Tryptophan hydroxylase |Human (Homo sapiens) [TaxId: 9606]
d1o1ha_ : (LEU346) (ARG367) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Streptomyces rubiginosus [TaxId: 1929]
d1ezvg_ : (PRO36) (VAL92) [view usage] : f.23.13.1 |Single transmembrane helix |Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1u8va2 : (HIS32) (THR59) [view usage] : e.6.1.1 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains |4-hydroxybutyryl-CoA dehydratase AbfD, NM domains |Clostridium aminobutyricum [TaxId: 33953]
d3bu8b_ : (ASP185) (PHE212) [view usage] : a.146.1.1 |Telomeric repeat binding factor (TRF) dimerisation domain |Telomeric repeat binding factor (TRF) dimerisation domain |Telomeric repeat binding factor (TRF) dimerisation domain |TRF2 |Human (Homo sapiens) [TaxId: 9606]
d3e2ta_ : (ASP270) (LEU299) [view usage] : d.178.1.1 |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d3fdla_ : (GLY-5) (GLN111) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1dbha1 : (GLN367) (ALA404) [view usage] : a.87.1.1 |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |Son of sevenless-1 (sos-1) |Human (Homo sapiens) [TaxId: 9606]
d1oj6d_ : (GLU5) (GLU35) [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Neuroglobin |Human (Homo sapiens) [TaxId: 9606]
d1qqya_ : (TRP108) (SER126) [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Dog (Canis familiaris), milk [TaxId: 9615]
d1dk4a_ : (LYS2) (TYR29) [view usage] : e.7.1.1 |Carbohydrate phosphatase |Carbohydrate phosphatase |Inositol monophosphatase/fructose-1,6-bisphosphatase-like |Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase |Methanococcus jannaschii [TaxId: 2190]
d1mvya2 : (GLU518) (GLY554) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Amylosucrase |Neisseria polysaccharea [TaxId: 489]
d2fefb2 : (THR143) (ILE165) [view usage] : a.254.1.1 |PA2201 C-terminal domain-like |PA2201 C-terminal domain-like |PA2201 C-terminal domain-like |Hypothetical protein PA2201 |Pseudomonas aeruginosa [TaxId: 287]
d1mzoa_ : (ASP130) (LYS161) [view usage] : c.7.1.1 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |PFL-like |Pyruvate formate-lyase, PFL |Escherichia coli [TaxId: 562]
d1cm5a_ : (PRO131) (LYS161) [view usage] : c.7.1.1 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |PFL-like |Pyruvate formate-lyase, PFL |Escherichia coli [TaxId: 562]
d2oeqa1 : (HIS6) (GLY59) [view usage] : a.281.1.2 |YheA-like |YheA/YmcA-like |YheA-like |YheA-like protein |Bacillus stearothermophilus [TaxId: 1422]
d2guba_ : (LEU347) (ARG368) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |automated matches |Streptomyces rubiginosus [TaxId: 1929]
d1a0da_ : (ARG374) (GLY398) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Bacillus stearothermophilus [TaxId: 1422]
d1oada_ : (LEU347) (ARG368) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Streptomyces rubiginosus [TaxId: 1929]
d1ji1a3 : (ASP524) (GLY554) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Maltogenic amylase, central domain |Thermoactinomyces vulgaris, TVAI [TaxId: 2026]
d1zyla1 : (ASP287) (GLN318) [view usage] : d.144.1.6 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |APH phosphotransferases |RdoA |Escherichia coli [TaxId: 562]
d1j1wa_ : (THR720) (LEU740) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |NADP-dependent isocitrate dehydrogenase |Pig (Sus scrofa) [TaxId: 9823]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, a.104, c.2, a.118, c.77, d.129, d.144, b.40, c.7, d.178, c.18, e.6, d.166, d.2, d.3, e.7, f.21, a.1, a.4, f.1,
a.74, a.87, a.146, f.23, a.281, d.22, a.254, f.31, a.131