Tableau information
Concept source: d1s14a_ amino acid (a.a.) range (PRO1085)(VAL1130)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO1085) (SER1117) H1
(SER1117) (LEU1122) H2
(LYS1124) (VAL1130) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -52.5° H2
E3 152.3° -148.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1s2ha_ : (GLU60) (ILE88) [view usage] : d.135.1.1 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |Human (Homo sapiens) [TaxId: 9606]
d1v5fa2 : (GLN121) (ARG134) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Aerococcus viridans [TaxId: 1377]
d3oicd_ : (ASP107) (LEU142) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d2onfb_ : (ILE109) (PHE138) [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |Hypothetical protein Ta0195 |Thermoplasma acidophilum [TaxId: 2303]
d3pb1i_ : (LYS145) (THR177) [view usage] : e.1.1.1 |Serpins |Serpins |Serpins |Plasminogen activator inhibitor-1 |Human (Homo sapiens) [TaxId: 9606]
d3pu5a_ : (ASP224) (PRO260) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Bordetella parapertussis [TaxId: 519]
d2d7vb_ : (THR131) (ILE160) [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |Hypothetical protein VCA0330 |Vibrio cholerae [TaxId: 666]
d2zpua_ : (PHE288) (SER308) [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |automated matches |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d4a4da_ : (THR118) (ALA138) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1snya_ : (VAL117) (SER153) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Carbonyl reductase sniffer |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1etha2 : (GLY309) (ALA333) [view usage] : c.69.1.19 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Pancreatic lipase, N-terminal domain |Pancreatic lipase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d1sqya2 : (THR376) (LYS416) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d2dtud2 : (ASN787) (GLU826) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d3znj5_ : (SER60) (PRO83) [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Rhodococcus opacus [TaxId: 37919]
d1lpab2 : (GLY308) (LEU327) [view usage] : c.69.1.19 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Pancreatic lipase, N-terminal domain |Pancreatic lipase, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d3t95a_ : (THR246) (LEU264) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |automated matches |Yersinia pestis [TaxId: 214092]
d3pjea_ : (ILE222) (ASP248) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3rglb_ : (ALA31) (TYR52) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |automated matches |Campylobacter jejuni [TaxId: 197]
d1lqaa_ : (SER209) (SER234) [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Tas protein |Escherichia coli [TaxId: 562]
d1llwa1 : (LEU1247) (ARG1272) [view usage] : b.80.4.1 |Single-stranded right-handed beta-helix |Alpha subunit of glutamate synthase, C-terminal domain |Alpha subunit of glutamate synthase, C-terminal domain |Alpha subunit of glutamate synthase, C-terminal domain |Synechocystis sp. [TaxId: 1143]
d1ta4a2 : (CYS135) (ALA164) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Aspartate beta-semialdehyde dehydrogenase |Haemophilus influenzae [TaxId: 727]
d2ghab_ : (ASN212) (PRO249) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d3mama_ : (TYR176) (GLU205) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Osmoprotection protein ProX |Archaeoglobus fulgidus [TaxId: 2234]
d3uxmd_ : (ALA62) (ASP95) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d2afim_ : (CYS97) (VAL126) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Nitrogenase iron protein |Azotobacter vinelandii [TaxId: 354]
d1v5ea2 : (GLN121) (ARG134) [view usage] : c.36.1.5 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase Pyr module |Pyruvate oxidase |Aerococcus viridans [TaxId: 1377]
d3loqa2 : (SER240) (ARG266) [view usage] : c.26.2.0 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d3bpba_ : (ARG220) (ASP236) [view usage] : d.126.1.3 |Pentein, beta/alpha-propeller |Pentein |Dimethylarginine dimethylaminohydrolase DDAH |Dimethylarginine dimethylaminohydrolase DDAH |Pseudomonas aeruginosa [TaxId: 287]
d1gpla2 : (GLY308) (LEU327) [view usage] : c.69.1.19 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Pancreatic lipase, N-terminal domain |Pancreatic lipase, N-terminal domain |Guinea pig (Cavia porcellus) [TaxId: 10141]
d4efia2 : (SER309) (GLY335) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Burkholderia xenovorans [TaxId: 266265]
d4brwa1 : (SER70) (ALA88) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d1tjya_ : (THR247) (LEU265) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |AI-2 receptor LsrB |Salmonella typhi [TaxId: 90370]
d1xhnb_ : (GLN75) (THR92) [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2fnca_ : (ASN212) (PRO249) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d3rjxa_ : (TYR181) (VAL201) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Fervidobacterium nodosum [TaxId: 381764]
d2gg4a_ : (ASP244) (LEU266) [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase |Agrobacterium sp. [TaxId: 268951]
d1axra_ : (ILE308) (ASN338) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1ea0a1 : (LEU1211) (ASN1237) [view usage] : b.80.4.1 |Single-stranded right-handed beta-helix |Alpha subunit of glutamate synthase, C-terminal domain |Alpha subunit of glutamate synthase, C-terminal domain |Alpha subunit of glutamate synthase, C-terminal domain |Azospirillum brasilense [TaxId: 192]
d3tria1 : (LYS72) (LEU97) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Coxiella burnetii [TaxId: 777]
d2d7va1 : (THR131) (ILE160) [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |Hypothetical protein VCA0330 |Vibrio cholerae [TaxId: 666]
d1us5a_ : (SER60) (ALA106) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Putative GluR0 ligand binding core |Thermus thermophilus [TaxId: 274]
d1nyed_ : (SER732) (SER763) [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |Osmotically inducible protein OsmC |Escherichia coli [TaxId: 562]
d1a99a_ : (HIS225) (SER267) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Putrescine receptor (PotF) |Escherichia coli [TaxId: 562]
d4edha_ : (ALA62) (ASP95) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d2ggda_ : (ASP244) (LEU266) [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase |Agrobacterium sp. [TaxId: 268951]
d1tm2a_ : (THR247) (LEU265) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |AI-2 receptor LsrB |Salmonella typhi [TaxId: 90370]
d4dc1b_ : (ARG120) (ASN141) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Streptomyces coelicolor [TaxId: 1902]
d2ghbb_ : (ASN212) (PRO249) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d1rh8a_ : (ASP4754) (GLU4772) [view usage] : b.7.1.2 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |Synaptotagmin-like (S variant) |Piccolo |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4jdfa_ : (HIS225) (ILE268) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1us4a_ : (SER60) (ALA106) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Putative GluR0 ligand binding core |Thermus thermophilus [TaxId: 274]
d3i3ob_ : (PRO255) (ASN281) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
d1fkas_ : (ASP12) (SER35) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Prokaryotic (30S subunit) |Thermus thermophilus [TaxId: 274]
d1mb4a2 : (ASN133) (ALA163) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Aspartate beta-semialdehyde dehydrogenase |Vibrio cholerae [TaxId: 666]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, e.8, c.1, c.69, c.94, d.68, c.2, d.58, i.1, c.79, c.26, c.93, d.122, c.37, c.36, d.104, c.95, c.87, d.81, d.126,
b.45, e.1, b.7, d.227, d.135