Tableau information
Concept source: d3uwwb_ amino acid (a.a.) range (THR181)(GLY214)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR181) (SER200) H1
(LYS202) (THR208) H2
(THR208) (GLY214) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 137.5° H2
E3 148.4° -45.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1wdka3 : (LEU354) (THR385) [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Fatty oxidation complex alpha subunit, middle domain |Pseudomonas fragi [TaxId: 296]
d4leja1 : (ASN90) (LYS112) [view usage] : b.82.1.0 |Double-stranded beta-helix |RmlC-like cupins |automated matches |automated matches |Pinus koraiensis [TaxId: 88728]
d3uwya_ : (LYS140) (PRO170) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Staphylococcus aureus [TaxId: 282458]
d1u0ea_ : (PRO441) (ASN470) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Mouse (Mus musculus) [TaxId: 10090]
d1u12a_ : (ARG220) (THR255) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |Putative ion channel CnbD |Mesorhizobium loti [TaxId: 381]
d3cklb_ : (GLY50) (GLU83) [view usage] : c.37.1.5 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |PAPS sulfotransferase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1cnea2 : (GLN249) (PHE270) [view usage] : c.25.1.1 |Ferredoxin reductase-like, C-terminal NADP-linked domain |Ferredoxin reductase-like, C-terminal NADP-linked domain |Reductases |Nitrate reductase |Maize (Zea mays) [TaxId: 4577]
d3hmkb_ : (GLN296) (GLY314) [view usage] : c.79.1.0 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1bg2a_ : (SER175) (ASN216) [view usage] : c.37.1.9 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Motor proteins |Kinesin |Human (Homo sapiens) [TaxId: 9606]
d1cvra2 : (THR309) (GLY340) [view usage] : c.17.1.2 |Caspase-like |Caspase-like |Gingipain R (RgpB), N-terminal domain |Gingipain R (RgpB), N-terminal domain |Porphyromonas gingivalis [TaxId: 837]
d3n3ka_ : (ASP902) (LYS931) [view usage] : d.3.1.9 |Cysteine proteinases |Cysteine proteinases |Ubiquitin carboxyl-terminal hydrolase, UCH |Ubiquitin carboxyl-terminal hydrolase 8 |Human (Homo sapiens) [TaxId: 9606]
d1dmua_ : (LEU246) (ASP267) [view usage] : c.52.1.4 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease BglI |Restriction endonuclease BglI |Bacillus subtilis [TaxId: 1423]
d1mioa_ : (ASN4) (THR29) [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, alpha chain |Clostridium pasteurianum [TaxId: 1501]
d1j99a_ : (THR47) (GLU79) [view usage] : c.37.1.5 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |PAPS sulfotransferase |Hydroxysteroid sulfotransferase sult2a1 |Human (Homo sapiens) [TaxId: 9606]
d2k9xa_ : (ASN36) (ASN73) [view usage] : d.15.3.0 |beta-Grasp (ubiquitin-like) |MoaD/ThiS |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d2dt8a_ : (SER119) (VAL159) [view usage] : c.119.1.0 |DAK1/DegV-like |DAK1/DegV-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d2z5fa_ : (GLY50) (GLU83) [view usage] : c.37.1.5 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |PAPS sulfotransferase |Thyroid hormone sulfotransferase Sult1b1 |Human (Homo sapiens) [TaxId: 9606]
d3vaxa_ : (HIS336) (TRP356) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Streptomyces lividans [TaxId: 1916]
d3lupa_ : (ALA122) (VAL160) [view usage] : c.119.1.0 |DAK1/DegV-like |DAK1/DegV-like |automated matches |automated matches |Streptococcus agalactiae [TaxId: 208435]
d1h1la_ : (ASN2) (LYS37) [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, alpha chain |Klebsiella pneumoniae [TaxId: 573]
d1tyqb1 : (GLY312) (ASP346) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin-related protein 2, Arp2 |Cow (Bos taurus) [TaxId: 9913]
d3ukrb_ : (GLY312) (ASP346) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin-related protein 2, Arp2 |Cow (Bos taurus) [TaxId: 9913]
d1f12a2 : (LYS55) (THR92) [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Short chain L-3-hydroxyacyl CoA dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
d3stvb_ : (GLY156) (LEU185) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Lycopersicon hirsutum [TaxId: 283673]
d6gpba_ : (ILE346) (ASN376) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1u05a_ : (ALA166) (GLN185) [view usage] : d.194.1.2 |CNF1/YfiH-like putative cysteine hydrolases |CNF1/YfiH-like putative cysteine hydrolases |YfiH-like |Hypothetical protein yfiH |Shigella flexneri [TaxId: 623]
d1nj8a3 : (GLU103) (ILE127) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |Prolyl-tRNA synthetase (ProRS) |Methanocaldococcus jannaschii [TaxId: 2190]
d2i6bb_ : (SER65) (ILE92) [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |Adenosine kinase |Human (Homo sapiens) [TaxId: 9606]
d1u3em2 : (SER137) (TYR170) [view usage] : d.285.1.1 |DNA-binding domain of intron-encoded endonucleases |DNA-binding domain of intron-encoded endonucleases |DNA-binding domain of intron-encoded endonucleases |Intron-encoded homing endonuclease I-HmuI |Bacteriophage SPO1 [TaxId: 10685]
d3hsda_ : (HIS72) (ILE98) [view usage] : d.58.30.1 |Ferredoxin-like |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |Escherichia coli [TaxId: 562]
d1j83a_ : (ASN1073) (ALA1095) [view usage] : b.18.1.12 |Galactose-binding domain-like |Galactose-binding domain-like |Family 17 carbohydrate binding module, CBM17 |Endo-1,4-beta glucanase EngF |Clostridium cellulovorans [TaxId: 1493]
d2zkrj1 : (ALA74) (ASP105) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Dog (Canis familiaris) [TaxId: 9615]
d3fdja_ : (GLY116) (SER155) [view usage] : c.119.1.0 |DAK1/DegV-like |DAK1/DegV-like |automated matches |automated matches |Eubacterium eligens [TaxId: 39485]
d2glvh_ : (VAL68) (THR103) [view usage] : d.38.1.6 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |FabZ-like |(3R)-hydroxymyristoyl ACP dehydrase FabZ |Helicobacter pylori [TaxId: 210]
d3hmka_ : (GLN296) (GLY314) [view usage] : c.79.1.0 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1ezwa_ : (VAL207) (CYS231) [view usage] : c.1.16.3 |TIM beta/alpha-barrel |Bacterial luciferase-like |F420 dependent oxidoreductases |Coenzyme F420 dependent tetrahydromethanopterin reductase |Methanopyrus kandleri [TaxId: 2320]
d1b3ta_ : (THR568) (ASP601) [view usage] : d.58.8.1 |Ferredoxin-like |Viral DNA-binding domain |Viral DNA-binding domain |Epstein barr virus nuclear antigen-1 (ebna1) |Epstein-Barr virus [TaxId: 10376]
d2c8ja_ : (GLU149) (SER180) [view usage] : c.92.1.1 |Chelatase-like |Chelatase |Ferrochelatase |automated matches |Bacillus anthracis [TaxId: 198094]
d4n0qa_ : (THR253) (ASN270) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Brucella melitensis [TaxId: 224914]
d1vp4b_ : (LEU157) (SER183) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Putative aminotransferase TM1131 |Thermotoga maritima [TaxId: 2336]
d3l6ca_ : (GLN296) (GLY314) [view usage] : c.79.1.0 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1ti2a2 : (LYS466) (TYR482) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Transhydroxylase alpha subunit, AthL |Pelobacter acidigallici [TaxId: 35816]
d2afig_ : (MET58) (TYR80) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Nitrogenase iron protein |Azotobacter vinelandii [TaxId: 354]
d1ofha_ : (SER98) (GLU258) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |HslU |Haemophilus influenzae [TaxId: 727]
d1mkzb_ : (GLY101) (GLY126) [view usage] : c.57.1.1 |Molybdenum cofactor biosynthesis proteins |Molybdenum cofactor biosynthesis proteins |MogA-like |MoaB |Escherichia coli [TaxId: 562]
d3co2b_ : (ARG219) (THR255) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |automated matches |Mesorhizobium loti [TaxId: 381]
d1u1ha1 : (ASP66) (LYS111) [view usage] : c.1.22.2 |TIM beta/alpha-barrel |UROD/MetE-like |Cobalamin-independent methionine synthase |5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1pzxb_ : (SER123) (ASP164) [view usage] : c.119.1.1 |DAK1/DegV-like |DAK1/DegV-like |DegV-like |Hypothetical protein apc36103 |Bacillus stearothermophilus [TaxId: 1422]
d2p9nb_ : (ALA279) (GLY305) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin-related protein 2, Arp2 |Cow (Bos taurus) [TaxId: 9913]
d2p9nb_ : (GLY312) (ARG343) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin-related protein 2, Arp2 |Cow (Bos taurus) [TaxId: 9913]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, b.82, c.67, c.69, c.81, c.2, d.58, i.1, c.79, c.92, c.80, c.93, c.72, c.37, d.104, c.55, b.18, d.194, d.3, c.87,
c.57, d.38, c.25, c.52, d.15, c.119, c.17, d.285