Tableau information
Concept source: d4o0ra_ amino acid (a.a.) range (LEU352)(ASN389)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU352) (GLU358) H1
(ASP362) (GLN384) H2
(GLN384) (ASN389) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -150.0° H2
E3 -47.0° 134.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2axpb_ : (SER34) (ARG62) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Hypothetical protein YorR |Bacillus subtilis [TaxId: 1423]
d3a3va_ : (LEU200) (TYR247) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Xylanase Y |Bacillus halodurans [TaxId: 86665]
d1g8la2 : (ARG138) (ILE175) [view usage] : b.103.1.1 |MoeA N-terminal region -like |MoeA N-terminal region -like |MoeA N-terminal region -like |Molybdenum cofactor biosynthesis protein MoeA, N-terminal and linker domains |Escherichia coli [TaxId: 562]
d4cqha2 : (HIS138) (ALA179) [view usage] : d.110.2.1 |Profilin-like |GAF domain-like |GAF domain |automated matches |Deinococcus radiodurans [TaxId: 1299]
d1p60a_ : (VAL81) (GLU127) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Deoxycytidine kinase |Human (Homo sapiens) [TaxId: 9606]
d2nqka2 : (ARG138) (ILE175) [view usage] : b.103.1.1 |MoeA N-terminal region -like |MoeA N-terminal region -like |MoeA N-terminal region -like |Molybdenum cofactor biosynthesis protein MoeA, N-terminal and linker domains |Escherichia coli [TaxId: 562]
d4tn1b1 : (ARG665) (LEU699) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Chaetomium thermophilum [TaxId: 209285]
d3wu3e_ : (VAL668) (GLY705) [view usage] : d.14.1.10 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |ATP-dependent protease Lon (La), catalytic domain |ATP-dependent protease Lon (La), catalytic domain |Escherichia coli [TaxId: 562]
d1bu6y1 : (ASN193) (ARG219) [view usage] : c.55.1.4 |Ribonuclease H-like motif |Actin-like ATPase domain |Glycerol kinase |Glycerol kinase |Escherichia coli [TaxId: 562]
d1g1ba_ : (PRO22) (ILE50) [view usage] : d.190.1.1 |Chorismate lyase-like |Chorismate lyase-like |Chorismate lyase |Chorismate lyase |Escherichia coli [TaxId: 562]
d2px5a_ : (LEU8) (ARG37) [view usage] : c.66.1.25 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |mRNA cap methylase |An RNA cap (nucleoside-2'-O-)-methyltransferase domain of RNA polymerase NS5 |Murray valley encephalitis virus (strain mve-1-51) [TaxId: 301478]
d1jiha2 : (THR5) (ASP30) [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |DNA polymerase eta |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1buoa_ : (THR50) (PHE74) [view usage] : d.42.1.1 |POZ domain |POZ domain |BTB/POZ domain |Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain |Human (Homo sapiens) [TaxId: 9606]
d1kwga2 : (ALA37) (THR71) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |A4 beta-galactosidase |Thermus thermophilus [TaxId: 274]
d2z76a_ : (SER7) (PRO41) [view usage] : d.17.4.3 |Cystatin-like |NTF2-like |Ketosteroid isomerase-like |Hypothetical protein Rv0760c |Mycobacterium tuberculosis H37Rv [TaxId: 83332]
d2nqmb2 : (ARG138) (ILE175) [view usage] : b.103.1.1 |MoeA N-terminal region -like |MoeA N-terminal region -like |MoeA N-terminal region -like |Molybdenum cofactor biosynthesis protein MoeA, N-terminal and linker domains |Escherichia coli [TaxId: 562]
d4tmka_ : (THR44) (ARG100) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Thymidylate kinase |Escherichia coli [TaxId: 562]
d2z77c_ : (SER7) (PRO41) [view usage] : d.17.4.3 |Cystatin-like |NTF2-like |Ketosteroid isomerase-like |Hypothetical protein Rv0760c |Mycobacterium tuberculosis H37Rv [TaxId: 83332]
d2zi9a_ : (VAL81) (GLU127) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Deoxycytidine kinase |Human (Homo sapiens) [TaxId: 9606]
d3edea2 : (HIS252) (ASN282) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Flavobacterium sp. [TaxId: 197856]
d4kb4a_ : (ILE2) (GLU61) [view usage] : d.67.3.0 |RRF/tRNA synthetase additional domain-like |Ribosome recycling factor, RRF |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d3ls6a_ : (GLY145) (GLU174) [view usage] : d.115.1.2 |YrdC/RibB |YrdC/RibB |3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB |automated matches |Salmonella typhimurium [TaxId: 90371]
d1pixa3 : (PRO304) (LYS339) [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Glutaconyl-CoA decarboxylase A subunit |Acidaminococcus fermentans [TaxId: 905]
d2radb_ : (GLU251) (GLY305) [view usage] : c.150.1.3 |EreA/ChaN-like |EreA/ChaN-like |EreA-like |Succinoglycan biosynthesis protein BC3120 |Bacillus cereus [TaxId: 1396]
d1v4sa1 : (PRO111) (PRO145) [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Glucokinase |Human (Homo sapiens) [TaxId: 9606]
d3lqua_ : (GLY145) (GLU174) [view usage] : d.115.1.2 |YrdC/RibB |YrdC/RibB |3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB |automated matches |Salmonella typhimurium [TaxId: 90371]
d2flob2 : (HIS46) (THR89) [view usage] : c.55.1.8 |Ribonuclease H-like motif |Actin-like ATPase domain |Ppx/GppA phosphatase |Exopolyphosphatase Ppx |Escherichia coli [TaxId: 562]
d4jg8a_ : (GLU500) (ASP539) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2b1xb1 : (THR517) (VAL553) [view usage] : d.17.4.4 |Cystatin-like |NTF2-like |Ring hydroxylating beta subunit |Naphthalene 1,2-dioxygenase beta subunit |Rhodococcus sp. ncimb12038 [TaxId: 92694]
d4fioa_ : (ASP37) (LEU71) [view usage] : d.147.1.0 |Methenyltetrahydromethanopterin cyclohydrolase |Methenyltetrahydromethanopterin cyclohydrolase |automated matches |automated matches |Methanobrevibacter ruminantium [TaxId: 634498]
d1fw9a_ : (PRO22) (MET49) [view usage] : d.190.1.1 |Chorismate lyase-like |Chorismate lyase-like |Chorismate lyase |Chorismate lyase |Escherichia coli [TaxId: 562]
d3h1vx1 : (PRO111) (PRO145) [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Glucokinase |Human (Homo sapiens) [TaxId: 9606]
d3n2ib_ : (THR44) (ASP97) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |automated matches |Vibrio cholerae [TaxId: 243277]
d3vqsc_ : (GLY188) (ARG222) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Hepatitis C virus [TaxId: 11103]
d1os5a_ : (GLY188) (ARG222) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Hepatitis C virus [TaxId: 11103]
d4cava2 : (THR399) (LEU436) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Aspergillus fumigatus [TaxId: 746128]
d3vqsa_ : (GLY188) (ARG222) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Hepatitis C virus [TaxId: 11103]
d1g81a_ : (PRO22) (MET49) [view usage] : d.190.1.1 |Chorismate lyase-like |Chorismate lyase-like |Chorismate lyase |Chorismate lyase |Escherichia coli [TaxId: 562]
d2oolb1 : (ASN143) (ALA188) [view usage] : d.110.2.1 |Profilin-like |GAF domain-like |GAF domain |Sensor protein PhyB2 |Rhodopseudomonas palustris [TaxId: 1076]
d2rada1 : (SER249) (GLY305) [view usage] : c.150.1.3 |EreA/ChaN-like |EreA/ChaN-like |EreA-like |Succinoglycan biosynthesis protein BC3120 |Bacillus cereus [TaxId: 1396]
d2zf5o1 : (ASN188) (GLU214) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Thermococcus kodakarensis [TaxId: 69014]
d3szya_ : (ASP211) (THR248) [view usage] : c.76.1.0 |Alkaline phosphatase-like |Alkaline phosphatase-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d2r82a3 : (GLU45) (ARG96) [view usage] : d.142.1.5 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |Pyruvate phosphate dikinase, N-terminal domain |Pyruvate phosphate dikinase, N-terminal domain |Clostridium symbiosum [TaxId: 1512]
d2dpwa1 : (TRP182) (VAL214) [view usage] : c.68.1.19 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |TTHA0179-like |Uncharacterized protein TTHA0179 |Thermus thermophilus [TaxId: 274]
d3t02a_ : (ASP211) (THR248) [view usage] : c.76.1.0 |Alkaline phosphatase-like |Alkaline phosphatase-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d2ckfb_ : (PRO10) (MET48) [view usage] : d.17.4.0 |Cystatin-like |NTF2-like |automated matches |automated matches |Sphingomonas sp. [TaxId: 279135]
d1dppa_ : (LYS437) (ARG485) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Dipeptide-binding protein |Escherichia coli [TaxId: 562]
d1j90a_ : (LEU65) (GLU104) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Deoxyribonucleoside kinase |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1w55a2 : (MET275) (ILE301) [view usage] : d.79.5.1 |Bacillus chorismate mutase-like |IpsF-like |IpsF-like |IspD/ispF bifunctional enzyme, MECDP synthase domain |Campylobacter jejuni [TaxId: 197]
d2axpa1 : (SER34) (ARG62) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Hypothetical protein YorR |Bacillus subtilis [TaxId: 1423]
d3b55a_ : (SER249) (GLY305) [view usage] : c.150.1.3 |EreA/ChaN-like |EreA/ChaN-like |EreA-like |Succinoglycan biosynthesis protein BC3120 |Bacillus cereus [TaxId: 1396]
d2z7aa_ : (SER7) (PRO41) [view usage] : d.17.4.3 |Cystatin-like |NTF2-like |Ketosteroid isomerase-like |Hypothetical protein Rv0760c |Mycobacterium tuberculosis H37Rv [TaxId: 83332]
d2xbmc_ : (THR8) (ASP37) [view usage] : c.66.1.25 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |mRNA cap methylase |automated matches |Dengue virus [TaxId: 12637]
d3wjaa1 : (ILE166) (VAL205) [view usage] : c.58.1.0 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4tlra_ : (GLY188) (ARG222) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Hepatitis c virus (isolate 1) [TaxId: 11104]
d1fc5a2 : (ARG138) (ILE175) [view usage] : b.103.1.1 |MoeA N-terminal region -like |MoeA N-terminal region -like |MoeA N-terminal region -like |Molybdenum cofactor biosynthesis protein MoeA, N-terminal and linker domains |Escherichia coli [TaxId: 562]
d4ewla_ : (ASP51) (LEU87) [view usage] : c.134.1.1 |LmbE-like |LmbE-like |LmbE-like |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d2wwfa_ : (THR49) (ASP98) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
d4tn1a1 : (ARG665) (LEU699) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Chaetomium thermophilum [TaxId: 209285]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.1, c.94, c.76, c.68, a.102, c.66, c.14, d.144, c.37, c.55, d.14, d.108, d.110, d.17, d.79, d.142, d.67, c.58, d.42,
c.134, c.150, d.115, d.190, d.147, b.103