Tableau information
Concept source: d2dzda1 amino acid (a.a.) range (LYS60)(TYR87)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS60) (ASP67) H1
(ASP67) (HIS78) H2
(ASP81) (TYR87) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -49.2° H2
E3 -141.4° 143.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1jqsc_ : (MET652) (PHE673) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |70S ribosome functional complex |Escherichia coli [TaxId: 562]
d1pg5a2 : (GLU230) (PRO259) [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Sulfolobus acidocaldarius [TaxId: 2285]
d1qynd_ : (ALA100) (LEU128) [view usage] : d.33.1.1 |SecB-like |SecB-like |Bacterial protein-export protein SecB |Bacterial protein-export protein SecB |Escherichia coli [TaxId: 562]
d2jdla_ : (ALA86) (THR104) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |automated matches |Mongolian snake-gourd (Trichosanthes kirilowii) [TaxId: 3677]
d4wg2a_ : (LEU103) (SER142) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d1tg7a5 : (TYR208) (ALA238) [view usage] : c.1.8.14 |TIM beta/alpha-barrel |(Trans)glycosidases |Glycosyl hydrolases family 35 catalytic domain |Beta-galactosidase LacA, N-terminal domain |Penicillium sp. [TaxId: 5081]
d1q4ra_ : (SER73) (ILE103) [view usage] : d.58.4.4 |Ferredoxin-like |Dimeric alpha+beta barrel |Plant stress-induced protein |Hypothetical protein AT3G17210.1 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2cmba_ : (LEU88) (ASN111) [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1qync_ : (ALA100) (LEU128) [view usage] : d.33.1.1 |SecB-like |SecB-like |Bacterial protein-export protein SecB |Bacterial protein-export protein SecB |Escherichia coli [TaxId: 562]
d3ukvb_ : (TYR723) (ARG743) [view usage] : b.82.3.0 |Double-stranded beta-helix |cAMP-binding domain-like |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
d1iu4a_ : (SER211) (SER235) [view usage] : d.3.1.8 |Cysteine proteinases |Cysteine proteinases |Microbial transglutaminase |Microbial transglutaminase |Streptoverticillium mobaraense [TaxId: 35621]
d3i4ea_ : (ASP326) (ILE347) [view usage] : c.1.12.7 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |Phosphoenolpyruvate mutase/Isocitrate lyase-like |automated matches |Burkholderia pseudomallei [TaxId: 28450]
d3lo3a_ : (ASP13) (VAL37) [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Colwellia psychrerythraea [TaxId: 167879]
d3og2a1 : (PRO273) (GLU298) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Trichoderma reesei [TaxId: 51453]
d2ff7a_ : (ASP637) (ILE660) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Haemolysin B ATP-binding protein |Escherichia coli [TaxId: 562]
d2r7ka1 : (ASN69) (GLY93) [view usage] : c.30.1.8 |PreATP-grasp domain |PreATP-grasp domain |PurP N-terminal domain-like |5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP |Methanocaldococcus jannaschii [TaxId: 2190]
d4ffba1 : (VAL183) (ASP206) [view usage] : c.32.1.0 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d2xtka_ : (CYS100) (GLY122) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Aspergillus fumigatus [TaxId: 451804]
d3o4sa_ : (MET151) (THR174) [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2bswa1 : (GLU79) (ASN109) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Probable acetyltransferase YitI |Bacillus licheniformis [TaxId: 1402]
d4aqhb_ : (HIS3) (TYR37) [view usage] : e.1.1.1 |Serpins |Serpins |Serpins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3euca_ : (GLY117) (PRO136) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Ralstonia eutropha [TaxId: 264198]
d3o26a_ : (TYR142) (ASN177) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Papaver somniferum [TaxId: 3469]
d2x2ya1 : (THR130) (TRP173) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Cellulomonas fimi [TaxId: 1708]
d3ur8a_ : (PRO214) (VAL257) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Potato (Solanum tuberosum) [TaxId: 4113]
d2bvta2 : (ASP129) (TRP173) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Mannanase A, ManA |Cellulomonas fimi [TaxId: 1708]
d1u02a_ : (GLY123) (GLY148) [view usage] : c.108.1.15 |HAD-like |HAD-like |Trehalose-phosphatase |Trehalose-6-phosphate phosphatase related protein |Thermoplasma acidophilum [TaxId: 2303]
d1vpqa_ : (HIS146) (GLU170) [view usage] : c.1.32.1 |TIM beta/alpha-barrel |TM1631-like |TM1631-like |Hypothetical protein TM1631 |Thermotoga maritima [TaxId: 2336]
d2pjra1 : (ILE264) (GLU283) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |DEXX box DNA helicase |Bacillus stearothermophilus, PcrA [TaxId: 1422]
d2pjrf1 : (ILE964) (GLN984) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |DEXX box DNA helicase |Bacillus stearothermophilus, PcrA [TaxId: 1422]
d4ep6a_ : (ARG250) (ALA287) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Rhodococcus rhodochrous [TaxId: 1829]
d2i5ia1 : (PRO230) (TYR257) [view usage] : c.6.2.8 |7-stranded beta/alpha barrel |Glycoside hydrolase/deacetylase |YdjC-like |Uncharacterized protein EF3048 |Enterococcus faecalis [TaxId: 1351]
d1si9a_ : (SER73) (ILE103) [view usage] : d.58.4.4 |Ferredoxin-like |Dimeric alpha+beta barrel |Plant stress-induced protein |Boiling stable protein 1 |European aspen (Populus tremula) [TaxId: 113636]
d4h24a_ : (GLU93) (SER142) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d1ofha_ : (SER337) (THR370) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |HslU |Haemophilus influenzae [TaxId: 727]
d2j5ih_ : (PHE118) (ALA134) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
d3s3ea_ : (LEU122) (THR145) [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2egga2 : (SER194) (THR212) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Shikimate 5-dehydrogenase AroE |Geobacillus kaustophilus [TaxId: 1462]
d3bzma_ : (LYS266) (LEU306) [view usage] : d.161.1.1 |ADC synthase |ADC synthase |ADC synthase |automated matches |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, b.82, c.67, a.104, c.2, c.6, d.58, i.1, c.108, c.14, c.45, d.165, c.37, d.3, c.32, c.78, d.108, e.1, c.30, d.33,
d.161