Tableau information
Concept source: d1gqea_ amino acid (a.a.) range (TYR187)(ARG203)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(TYR187) (LEU192) H1
(LEU192) (THR196) H2
(GLY197) (ARG203) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -42.8° H2
E3 48.9° 79.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2uz5a_ : (ARG112) (ILE131) [view usage] : d.26.1.0 |FKBP-like |FKBP-like |automated matches |automated matches |Legionella pneumophila [TaxId: 446]
d1i6ja_ : (THR24) (ARG44) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |MMLV reverse transcriptase |Moloney murine leukemia virus, MoMLV [TaxId: 11801]
d1d1ua_ : (THR24) (ARG44) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |MMLV reverse transcriptase |Moloney murine leukemia virus, MoMLV [TaxId: 11801]
d2j6xc_ : (GLU48) (ALA68) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Aerococcus viridans [TaxId: 1377]
d4dqqa2 : (GLN470) (ASP496) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |automated matches |Geobacillus kaustophilus [TaxId: 235909]
d1mmla_ : (THR24) (ARG44) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |MMLV reverse transcriptase |Moloney murine leukemia virus, MoMLV [TaxId: 11801]
d1kf6a3 : (GLY320) (PRO352) [view usage] : d.168.1.1 |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Fumarate reductase |Escherichia coli [TaxId: 562]
d1bcce1 : (THR102) (LEU135) [view usage] : b.33.1.1 |ISP domain |ISP domain |Rieske iron-sulfur protein (ISP) |ISP subunit of the mitochondrial cytochrome bc1-complex, water-soluble domain |Chicken (Gallus gallus) [TaxId: 9031]
d1lmza_ : (PRO111) (GLN128) [view usage] : a.96.1.4 |DNA-glycosylase |DNA-glycosylase |3-Methyladenine DNA glycosylase I (Tag) |3-Methyladenine DNA glycosylase I (Tag) |Escherichia coli [TaxId: 562]
d4ez9a2 : (GLN470) (ASP496) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |automated matches |Geobacillus kaustophilus [TaxId: 1462]
d1ulwa_ : (ALA354) (PHE403) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450-NOR, nitric reductase |Fungus (Fusarium oxysporum) [TaxId: 5507]
d3ml1a1 : (HIS280) (VAL297) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |automated matches |Ralstonia eutropha [TaxId: 381666]
d1qaja_ : (SER21) (ARG44) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |MMLV reverse transcriptase |Moloney murine leukemia virus, MoMLV [TaxId: 11801]
d2ehga_ : (PRO117) (LEU148) [view usage] : c.55.3.0 |Ribonuclease H-like motif |Ribonuclease H-like |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d4dqpd2 : (GLN470) (ASP496) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |automated matches |Geobacillus kaustophilus [TaxId: 235909]
d3zbwa_ : (THR49) (SER73) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3ju8a_ : (SER456) (LEU471) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d2j6lb_ : (GLN9) (VAL27) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4hqmb_ : (VAL4) (SER38) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
d4knab_ : (SER455) (GLN474) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
d1enfa2 : (ASN185) (LYS200) [view usage] : d.15.6.1 |beta-Grasp (ubiquitin-like) |Superantigen toxins, C-terminal domain |Superantigen toxins, C-terminal domain |Staphylococcal enterotoxin H, SEH |Staphylococcus aureus [TaxId: 1280]
d1e7pa3 : (GLY334) (PRO366) [view usage] : d.168.1.1 |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Fumarate reductase |Wolinella succinogenes [TaxId: 844]
d3rh9a_ : (TRP101) (ILE130) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Marinobacter aquaeolei [TaxId: 351348]
d1stxa_ : (ASN116) (THR139) [view usage] : c.52.1.2 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease EcoRV |Restriction endonuclease EcoRV |Escherichia coli [TaxId: 562]
d4gp4a_ : (ASP517) (PRO557) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial ba3 type cytochrome c oxidase subunit I |Thermus thermophilus [TaxId: 274]
d2ap9a1 : (THR11) (LYS36) [view usage] : c.73.1.2 |Carbamate kinase-like |Carbamate kinase-like |N-acetyl-l-glutamate kinase |N-acetyl-l-glutamate kinase |Mycobacterium tuberculosis [TaxId: 1773]
d1cl3a_ : (ASP7) (TYR29) [view usage] : b.54.1.1 |Core binding factor beta, CBF |Core binding factor beta, CBF |Core binding factor beta, CBF |Core binding factor beta, CBF |Human (Homo sapiens) [TaxId: 9606]
d4knaa_ : (SER455) (GLN474) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
d2jhba_ : (ASP9) (GLY33) [view usage] : b.54.1.1 |Core binding factor beta, CBF |Core binding factor beta, CBF |Core binding factor beta, CBF |Core binding factor beta, CBF |Mouse (Mus musculus) [TaxId: 10090]
d1or6b_ : (SER78) (ASP110) [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Heme-based aerotactic transducer HemAT, sensor domain |Bacillus subtilis [TaxId: 1423]
d1a23a_ : (LYS118) (VAL155) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |Disulfide-bond formation facilitator (DsbA) |Escherichia coli [TaxId: 562]
d3ju8b_ : (SER456) (LEU471) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d3o5aa1 : (HIS280) (VAL297) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |automated matches |Ralstonia eutropha [TaxId: 381666]
d1ogya2 : (GLN281) (PRO297) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Periplasmic nitrate reductase alpha chain |Rhodobacter sphaeroides [TaxId: 1063]
d1qajb_ : (THR24) (ARG44) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |MMLV reverse transcriptase |Moloney murine leukemia virus, MoMLV [TaxId: 11801]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.1, c.81, a.104, c.82, c.47, c.55, a.96, c.73, f.24, c.52, a.1, a.4, d.5, d.168, d.15, d.26, e.38, b.33, b.54