Tableau information
Concept source: d1kl3a_ amino acid (a.a.) range (THR115)(LYS132)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR115) (ALA119) H1
(ALA119) (SER122) H2
(SER122) (LYS132) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -42.8° H2
E3 -67.8° -32.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1wx5a_ : (ASP209) (ALA273) [view usage] : a.86.1.3 |Di-copper centre-containing domain |Di-copper centre-containing domain |Tyrosinase |Tyrosinase |Streptomyces castaneoglobisporus [TaxId: 79261]
d1vb2a_ : (GLN168) (LEU195) [view usage] : b.121.4.7 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Tombusviridae-like VP |Sobemovirus coat protein |SMV (Sesbania mosaic virus) [TaxId: 12558]
d2zwea_ : (ASP209) (ASP272) [view usage] : a.86.1.3 |Di-copper centre-containing domain |Di-copper centre-containing domain |Tyrosinase |Tyrosinase |Streptomyces castaneoglobisporus [TaxId: 79261]
d1iq8a4 : (SER408) (GLU423) [view usage] : d.17.6.1 |Cystatin-like |Pre-PUA domain |Archaeosine tRNA-guanine transglycosylase, C2 domain |Archaeosine tRNA-guanine transglycosylase, C2 domain |Pyrococcus horikoshii [TaxId: 53953]
d3zzfb_ : (ASN330) (ARG350) [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1xfda1 : (THR132) (PRO146) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1lcvb_ : (THR315) (LYS332) [view usage] : b.61.1.1 |Streptavidin-like |Avidin/streptavidin |Avidin/streptavidin |Streptavidin |Streptomyces avidinii [TaxId: 1895]
d1nbxa_ : (THR115) (LYS132) [view usage] : b.61.1.1 |Streptavidin-like |Avidin/streptavidin |Avidin/streptavidin |Streptavidin |Streptomyces avidinii [TaxId: 1895]
d1y5yc_ : (PRO2105) (HIS2121) [view usage] : d.14.1.12 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |Formaldehyde-activating enzyme, FAE |Formaldehyde-activating enzyme, FAE |Methylobacterium extorquens [TaxId: 408]
d1c50a_ : (LEU267) (ASP283) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d2aefb2 : (TYR247) (ILE269) [view usage] : d.286.1.1 |TrkA C-terminal domain-like |TrkA C-terminal domain-like |TrkA C-terminal domain-like |Potassium channel-related protein MthK, C-terminal domain |Methanothermobacter thermautotrophicus [TaxId: 145262]
d4bj8b_ : (ASN104) (LYS121) [view usage] : b.61.1.0 |Streptavidin-like |Avidin/streptavidin |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
d1j4aa1 : (GLU265) (PRO296) [view usage] : c.2.1.4 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Formate/glycerate dehydrogenases, NAD-domain |D-lactate dehydrogenase |Lactobacillus helveticus [TaxId: 1587]
d2gpba_ : (LEU267) (ASP283) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d2r8ja2 : (THR5) (ASP30) [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |DNA polymerase eta |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4bj8k_ : (ASN104) (LYS121) [view usage] : b.61.1.0 |Streptavidin-like |Avidin/streptavidin |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
d3awta_ : (ASP209) (ASP272) [view usage] : a.86.1.3 |Di-copper centre-containing domain |Di-copper centre-containing domain |Tyrosinase |Tyrosinase |Streptomyces castaneoglobisporus [TaxId: 79261]
d4dckc_ : (LYS133) (PRO145) [view usage] : b.42.1.0 |beta-Trefoil |Cytokine |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1nqma_ : (THR115) (LYS132) [view usage] : b.61.1.1 |Streptavidin-like |Avidin/streptavidin |Avidin/streptavidin |Streptavidin |Streptomyces avidinii [TaxId: 1895]
d3o26a_ : (LEU125) (TYR142) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Papaver somniferum [TaxId: 3469]
d1e5la2 : (SER176) (PHE189) [view usage] : d.81.1.2 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |Homoserine dehydrogenase-like |Saccharopine reductase |Fungus (Magnaporthe grisea) [TaxId: 148305]
d1q1ua_ : (LYS128) (ILE141) [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Fibrobast growth factor homologous factor 1 (FHF1b, FGF12b) |Human (Homo sapiens) [TaxId: 9606]
d1w93a3 : (ASP185) (ASP214) [view usage] : d.142.1.2 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |BC ATP-binding domain-like |Acetyl-CoA carboxylase, BC-M subdomain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3q8ga2 : (GLU96) (HIS115) [view usage] : c.13.1.0 |SpoIIaa-like |CRAL/TRIO domain |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1gh7a2 : (SER137) (TYR151) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors |Human (Homo sapiens) [TaxId: 9606]
d2zmxa_ : (ASP209) (ASP272) [view usage] : a.86.1.3 |Di-copper centre-containing domain |Di-copper centre-containing domain |Tyrosinase |Tyrosinase |Streptomyces castaneoglobisporus [TaxId: 79261]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.70, e.8, c.2, a.86, d.14, b.121, c.87, d.81, c.13, b.1, c.73, b.42, d.17, d.142, b.61, d.286