Tableau information
Concept source: d1o6ga2 amino acid (a.a.) range (ILE519)(GLY553)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ILE519) (LYS523) H1
(GLN524) (GLY541) H2
(LEU548) (GLY553) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 55.5° H2
E3 -144.7° 148.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.5° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3qmma_ : (ASP133) (GLY153) [view usage] : c.69.1.18 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Bacterial lipase |automated matches |Bacillus subtilis [TaxId: 1423]
d2ve4b_ : (GLY98) (TYR144) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Synechocystis sp. [TaxId: 1148]
d2w1va_ : (LEU219) (PRO246) [view usage] : d.160.1.0 |Carbon-nitrogen hydrolase |Carbon-nitrogen hydrolase |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1tv2a_ : (TYR175) (GLY203) [view usage] : c.1.25.1 |TIM beta/alpha-barrel |Monomethylamine methyltransferase MtmB |Monomethylamine methyltransferase MtmB |Monomethylamine methyltransferase MtmB |Methanosarcina barkeri [TaxId: 2208]
d1us3a2 : (CYS470) (ILE495) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase 10c |Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]
d1us2a2 : (CYS470) (ILE495) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase 10c |Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]
d1igwc_ : (ASP330) (ILE350) [view usage] : c.1.12.7 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |Phosphoenolpyruvate mutase/Isocitrate lyase-like |Isocitrate lyase |Escherichia coli [TaxId: 562]
d1oa0a_ : (TRP288) (THR306) [view usage] : e.26.1.1 |Prismane protein-like |Prismane protein-like |Hybrid cluster protein (prismane protein) |Hybrid cluster protein (prismane protein) |Desulfovibrio desulfuricans [TaxId: 876]
d1c3ra_ : (HIS21) (PRO51) [view usage] : c.42.1.2 |Arginase/deacetylase |Arginase/deacetylase |Histone deacetylase, HDAC |HDAC homologue |Aquifex aeolicus [TaxId: 63363]
d1yjra_ : (ASP49) (LEU71) [view usage] : d.58.17.0 |Ferredoxin-like |HMA, heavy metal-associated domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ioba2 : (ASP34) (THR76) [view usage] : d.3.1.15 |Cysteine proteinases |Cysteine proteinases |CHAP domain |Glutathionylspermidine synthase, amidase domain |Escherichia coli [TaxId: 562]
d3mama_ : (TYR63) (ALA103) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Osmoprotection protein ProX |Archaeoglobus fulgidus [TaxId: 2234]
d1rqea2 : (ALA34) (CYS55) [view usage] : c.1.10.5 |TIM beta/alpha-barrel |Aldolase |HMGL-like |Transcarboxylase 5S subunit, N-terminal domain |Propionibacterium freudenreichii shermanii [TaxId: 1752]
d1izoa_ : (GLY89) (PHE135) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome p450 152a1 (Bs-beta) |Bacillus subtilis [TaxId: 1423]
d2o05a1 : (GLY179) (GLN206) [view usage] : c.66.1.17 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Spermidine synthase |Spermidine synthase |Human (Homo sapiens) [TaxId: 9606]
d3qimb_ : (GLU262) (THR292) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Nickel-binding periplasmic protein NikA |Escherichia coli [TaxId: 562]
d3d2ba_ : (ASP133) (GLY153) [view usage] : c.69.1.18 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Bacterial lipase |Lipase A |Bacillus subtilis [TaxId: 1423]
d1u05a_ : (TRP127) (PRO155) [view usage] : d.194.1.2 |CNF1/YfiH-like putative cysteine hydrolases |CNF1/YfiH-like putative cysteine hydrolases |YfiH-like |Hypothetical protein yfiH |Shigella flexneri [TaxId: 623]
d4brwa2 : (ASN388) (ALA408) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d1b9ha_ : (GLU239) (GLN279) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) |Amycolatopsis mediterranei [TaxId: 33910]
d2jg3a1 : (PHE122) (PHE162) [view usage] : c.66.1.27 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |DNA methylase TaqI, N-terminal domain |automated matches |Thermus aquaticus [TaxId: 271]
d4oera_ : (LEU261) (THR290) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Nickel-binding periplasmic protein NikA |Brucella suis [TaxId: 29461]
d4fgld_ : (GLY159) (ALA185) [view usage] : c.23.5.3 |Flavodoxin-like |Flavoproteins |Quinone reductase |Quinone reductase type 2 (menadione reductase) |Human (Homo sapiens) [TaxId: 9606]
d1mxsa_ : (SER62) (THR85) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |KDPG aldolase |Pseudomonas putida [TaxId: 303]
d1gnla_ : (TRP288) (THR306) [view usage] : e.26.1.1 |Prismane protein-like |Prismane protein-like |Hybrid cluster protein (prismane protein) |Hybrid cluster protein (prismane protein) |Desulfovibrio desulfuricans [TaxId: 876]
d1gnta_ : (TRP292) (THR310) [view usage] : e.26.1.1 |Prismane protein-like |Prismane protein-like |Hybrid cluster protein (prismane protein) |Hybrid cluster protein (prismane protein) |Desulfovibrio vulgaris [TaxId: 881]
d2c81a_ : (GLU252) (MET292) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Bacillus circulans [TaxId: 1397]
d2pt7a_ : (VAL70) (ASN98) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Hexameric traffic ATPase, HP0525 |Helicobacter pylori [TaxId: 210]
d1nlzb_ : (VAL70) (ASN98) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Hexameric traffic ATPase, HP0525 |Helicobacter pylori [TaxId: 210]
d2ew9a1 : (ASP49) (VAL71) [view usage] : d.58.17.0 |Ferredoxin-like |HMA, heavy metal-associated domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4dcxb_ : (GLU262) (THR292) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Nickel-binding periplasmic protein NikA |Escherichia coli [TaxId: 562]
d4wuob_ : (PRO75) (ALA106) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Thermus thermophilus [TaxId: 274]
d4lnca_ : (SER145) (LYS183) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Streptomyces rubiginosus [TaxId: 1929]
d1l1ya_ : (GLY277) (GLY316) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Processive endocellulase CelF (Cel48F) |Clostridium thermocellum [TaxId: 1515]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.67, c.69, c.94, a.104, d.58, a.102, c.66, c.77, c.42, c.23, c.37, d.194, d.3, d.160, e.26