Tableau information
Concept source: d1zvka_ amino acid (a.a.) range (PRO75)(ALA100)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO75) (ILE83) H1
(GLU84) (ALA90) H2
(LYS94) (ALA100) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 10.4° H2
E3 155.6° 160.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4v19q_ : (TRP99) (TRP122) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, mitochondrial (54S or 39S subunit) |Pig (Sus scrofa) [TaxId: 9823]
d2bnja1 : (LYS101) (VAL129) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Thermoascus aurantiacus [TaxId: 5087]
d1cf2o2 : (ASN141) (ALA170) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Methanothermus fervidus [TaxId: 2180]
d1yocb_ : (HIS60) (PRO88) [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |Hypothetical protein PA1835 |Pseudomonas aeruginosa [TaxId: 287]
d1q85b1 : (GLU340) (PHE361) [view usage] : c.1.21.2 |TIM beta/alpha-barrel |Dihydropteroate synthetase-like |Methyltetrahydrofolate-utiluzing methyltransferases |Cobalamin-dependent methionine synthase MetH, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d1zl2a_ : (GLY1071) (GLY1093) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Uridine phosphorylase |Salmonella typhimurium [TaxId: 90371]
d1ex5a_ : (ASP197) (ASN231) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]
d2uyva_ : (PHE9) (ARG36) [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |L-rhamnulose-1-phosphate aldolase |Escherichia coli [TaxId: 562]
d1i1ga2 : (ASP110) (ILE135) [view usage] : d.58.4.2 |Ferredoxin-like |Dimeric alpha+beta barrel |Lrp/AsnC-like transcriptional regulator C-terminal domain |LprA |Pyrococcus furiosus [TaxId: 2261]
d3vifa_ : (THR414) (ALA443) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Neotermes koshunensis [TaxId: 60586]
d2e3zb_ : (ASP386) (GLY414) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Basidomycetes fungus (Phanerochaete chrysosporium) [TaxId: 5306]
d1dosa_ : (PRO199) (PHE222) [view usage] : c.1.10.2 |TIM beta/alpha-barrel |Aldolase |Class II FBP aldolase |Fructose-bisphosphate aldolase (FBP aldolase) |Escherichia coli [TaxId: 562]
d1otga_ : (LEU18) (TRP46) [view usage] : d.80.1.2 |Tautomerase/MIF |Tautomerase/MIF |5-carboxymethyl-2-hydroxymuconate isomerase (CHMI) |5-carboxymethyl-2-hydroxymuconate isomerase (CHMI) |Escherichia coli [TaxId: 562]
d2v2ba_ : (PHE9) (ARG36) [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |automated matches |Escherichia coli [TaxId: 562]
d2hrde_ : (GLY5071) (GLY5093) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Uridine phosphorylase |Salmonella typhimurium [TaxId: 90371]
d4i2va_ : (PRO72) (GLY93) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Uridine phosphorylase |Yersinia pseudotuberculosis [TaxId: 633]
d1vjta2 : (HIS182) (VAL208) [view usage] : d.162.1.2 |LDH C-terminal domain-like |LDH C-terminal domain-like |AglA-like glucosidase |Putative alpha-glucosidase TM0752 |Thermotoga maritima [TaxId: 2336]
d1vc2a2 : (CYS149) (HIS176) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Thermus thermophilus [TaxId: 274]
d2yyba_ : (GLY209) (HIS238) [view usage] : c.135.1.0 |NIF3 (NGG1p interacting factor 3)-like |NIF3 (NGG1p interacting factor 3)-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d1e4mm_ : (TYR427) (ALA456) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Plant beta-glucosidase (myrosinase) |White mustard (Sinapis alba) [TaxId: 3728]
d2v9oe_ : (PHE9) (ARG36) [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |automated matches |Escherichia coli [TaxId: 562]
d1yoca1 : (HIS60) (PRO88) [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |Hypothetical protein PA1835 |Pseudomonas aeruginosa [TaxId: 287]
d2f8sa2 : (LEU437) (ASN458) [view usage] : c.55.3.10 |Ribonuclease H-like motif |Ribonuclease H-like |PIWI domain |automated matches |Aquifex aeolicus [TaxId: 63363]
d2x0sa1 : (ASP828) (GLY856) [view usage] : c.1.12.2 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |Pyruvate phosphate dikinase, C-terminal domain |Pyruvate phosphate dikinase, C-terminal domain |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d3dlxb1 : (PRO137) (PRO158) [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2jg7a_ : (PHE167) (ALA191) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Acanthopagrus schlegeli [TaxId: 72011]
d2e3za_ : (ASP386) (GLY414) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Basidomycetes fungus (Phanerochaete chrysosporium) [TaxId: 5306]
d3cdka_ : (PRO101) (ALA122) [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d2hgjp1 : (GLU112) (ARG133) [view usage] : d.41.4.2 |alpha/beta-Hammerhead |Ribosomal protein L16p/L10e |Ribosomal protein L16p |Ribosomal protein L16p |Thermus thermophilus [TaxId: 274]
d2v9gb_ : (PHE9) (ARG36) [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |automated matches |Escherichia coli [TaxId: 562]
d1sh7b_ : (THR104) (SER128) [view usage] : c.41.1.0 |Subtilisin-like |Subtilisin-like |automated matches |automated matches |Vibrio sp. [TaxId: 210249]
d2v2aa_ : (PHE9) (ARG36) [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |automated matches |Escherichia coli [TaxId: 562]
d1vi7a1 : (GLY34) (TRP59) [view usage] : d.14.1.11 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |YigZ N-terminal domain-like |Hypothetical protein YigZ, N-terminal domain |Escherichia coli [TaxId: 562]
d3ahza_ : (THR414) (ALA443) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Neotermes koshunensis [TaxId: 60586]
d2k2ga_ : (ASN126) (LYS151) [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Macrophage elastase (MMP-12) |Human (Homo sapiens) [TaxId: 9606]
d2v29a_ : (PHE9) (ARG36) [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |L-rhamnulose-1-phosphate aldolase |Escherichia coli [TaxId: 562]
d1dwam_ : (TYR427) (ALA456) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Plant beta-glucosidase (myrosinase) |White mustard (Sinapis alba) [TaxId: 3728]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, d.58, i.1, c.82, c.56, d.92, c.124, c.135, c.74, c.55, d.14, d.81, c.41, d.38, d.41, d.162, d.80