Tableau information
Concept source: d1i0aa_ amino acid (a.a.) range (SER322)(LYS357)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER322) (ASP328) H1
(GLU330) (LEU353) H2
(LEU353) (LYS357) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 19.1° H2
E3 -56.8° -37.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1k62a_ : (ASN322) (GLN357) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Human (Homo sapiens) [TaxId: 9606]
d2og4a_ : (SER2148) (SER2172) [view usage] : c.97.3.0 |Cytidine deaminase-like |JAB1/MPN domain |automated matches |automated matches |Saccharomyces cerevisiae [TaxId: 285006]
d1zbpa1 : (PRO62) (VAL93) [view usage] : e.61.1.1 |ImpE-like |ImpE-like |ImpE-like |Hypothetical protein VPA1032 |Vibrio parahaemolyticus [TaxId: 670]
d2p4va1 : (ASN45) (TYR77) [view usage] : a.2.1.0 |Long alpha-hairpin |GreA transcript cleavage protein, N-terminal domain |automated matches |automated matches |Escherichia coli [TaxId: 562]
d2cvea1 : (GLY100) (PRO123) [view usage] : d.14.1.11 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |YigZ N-terminal domain-like |Hypothetical protein TTHA1053, N-terminal domain |Thermus thermophilus [TaxId: 274]
d3p9ga_ : (LYS118) (PRO145) [view usage] : d.20.1.2 |UBC-like |UBC-like |UEV domain |Tumor susceptibility gene 101 (TSG101) |Human (Homo sapiens) [TaxId: 9606]
d3om7a_ : (ARG48) (ASP69) [view usage] : b.67.2.2 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |Levansucrase |Levansucrase |Bacillus megaterium [TaxId: 1404]
d3lgia_ : (ASN48) (THR68) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3sqgb1 : (PRO20) (ASP46) [view usage] : d.58.31.0 |Ferredoxin-like |Methyl-coenzyme M reductase subunits |automated matches |automated matches |Uncultured archaeon [TaxId: 115547]
d2f0ra_ : (LYS118) (ARG144) [view usage] : d.20.1.2 |UBC-like |UBC-like |UEV domain |Tumor susceptibility gene 101 (TSG101) |Human (Homo sapiens) [TaxId: 9606]
d1e6vb2 : (PRO24) (ASP50) [view usage] : d.58.31.2 |Ferredoxin-like |Methyl-coenzyme M reductase subunits |Methyl-coenzyme M reductase alpha and beta chain N-terminal domain |Beta chain |Methanopyrus kandleri [TaxId: 2320]
d4bgdc_ : (SER2148) (SER2172) [view usage] : c.97.3.0 |Cytidine deaminase-like |JAB1/MPN domain |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1u15c_ : (LYS323) (GLU358) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
d2w8ya_ : (PRO906) (PHE930) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1tjvc_ : (LYS325) (GLU360) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
d3nyib_ : (SER144) (THR164) [view usage] : c.119.1.0 |DAK1/DegV-like |DAK1/DegV-like |automated matches |automated matches |Eubacterium ventriosum [TaxId: 411463]
d3vedb_ : (SER198) (ASP235) [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Rhodococcus jostii [TaxId: 101510]
d4eq2a2 : (ARG130) (ASN148) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d4il6b_ : (LEU135) (ASP170) [view usage] : f.55.1.1 |Photosystem II antenna protein-like |Photosystem II antenna protein-like |Photosystem II antenna protein-like |automated matches |Thermosynechococcus vulcanus [TaxId: 32053]
d3veeb_ : (SER198) (ASP235) [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Rhodococcus jostii [TaxId: 101510]
d1hbmb2 : (PRO23) (ASN49) [view usage] : d.58.31.2 |Ferredoxin-like |Methyl-coenzyme M reductase subunits |Methyl-coenzyme M reductase alpha and beta chain N-terminal domain |Beta chain |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1i0aa_ : (SER322) (LYS357) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Turkey (Meleagris gallopavo), delta-crystallin [TaxId: 9103]
d4ilgc_ : (SER2148) (SER2172) [view usage] : c.97.3.0 |Cytidine deaminase-like |JAB1/MPN domain |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d3nyia_ : (SER144) (THR164) [view usage] : c.119.1.0 |DAK1/DegV-like |DAK1/DegV-like |automated matches |automated matches |Eubacterium ventriosum [TaxId: 411463]
d1e6yb2 : (ASP2020) (ASN2046) [view usage] : d.58.31.2 |Ferredoxin-like |Methyl-coenzyme M reductase subunits |Methyl-coenzyme M reductase alpha and beta chain N-terminal domain |Beta chain |Methanosarcina barkeri [TaxId: 2208]
d1i0ac_ : (SER322) (GLU358) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Turkey (Meleagris gallopavo), delta-crystallin [TaxId: 9103]
d3vecb_ : (SER198) (ASP235) [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Rhodococcus jostii [TaxId: 101510]
d2hg6a1 : (SER5) (PHE21) [view usage] : d.364.1.1 |PA1123-like |PA1123-like |PA1123-like |Hypothetical protein PA1123 |Pseudomonas aeruginosa [TaxId: 287]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.58, b.67, b.47, a.127, d.14, b.1, a.123, c.97, d.20, c.119, a.2, f.55, e.61, d.364