Tableau information
Concept source: d1fnna2 amino acid (a.a.) range (PRO138)(GLY165)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO138) (GLU150) H1
(GLU150) (GLY155) H2
(ALA160) (GLY165) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -61.0° H2
E3 -160.7° 132.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1gola_ : (GLU301) (ALA325) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |MAP kinase Erk2 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3qj8a_ : (SER92) (ASP120) [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1d0id_ : (HIS58) (ALA82) [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Streptomyces coelicolor [TaxId: 1902]
d1ywhc3 : (ALA244) (THR267) [view usage] : g.7.1.3 |Snake toxin-like |Snake toxin-like |Extracellular domain of cell surface receptors |Urokinase plasminogen activator surface receptor uPAR |Human (Homo sapiens) [TaxId: 9606]
d1d0ih_ : (HIS58) (ALA82) [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Streptomyces coelicolor [TaxId: 1902]
d1d0ie_ : (HIS58) (ALA82) [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Streptomyces coelicolor [TaxId: 1902]
d1xb2b3 : (LEU258) (CYS328) [view usage] : d.43.1.1 |EF-Ts domain-like |Elongation factor Ts (EF-Ts), dimerisation domain |Elongation factor Ts (EF-Ts), dimerisation domain |Elongation factor Ts (EF-Ts), dimerisation domain |Cow (Bos taurus), mitochondrial [TaxId: 9913]
d1dtwb1 : (ILE110) (PRO135) [view usage] : c.36.1.7 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase Pyr module |Branched-chain alpha-keto acid dehydrogenase, Pyr module |Human (Homo sapiens) [TaxId: 9606]
d2dd8s1 : (LYS390) (ASN424) [view usage] : d.318.1.1 |SARS receptor-binding domain-like |SARS receptor-binding domain-like |SARS receptor-binding domain-like |Spike protein S1 |SARS coronavirus [TaxId: 227859]
d4fnha_ : (GLU60) (ASP101) [view usage] : d.58.4.5 |Ferredoxin-like |Dimeric alpha+beta barrel |PG130-like |Hypothetical protein PG130 (SAV0165) |Staphylococcus aureus [TaxId: 1280]
d2qr8a_ : (GLU462) (GLY486) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3erka_ : (VAL302) (ALA325) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |MAP kinase Erk2 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1tbha1 : (GLN143) (GLY178) [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Arginase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4v1ap_ : (GLU28) (HIS57) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, mitochondrial (54S or 39S subunit) |Pig (Sus scrofa) [TaxId: 9823]
d2zdod_ : (SER60) (ASP100) [view usage] : d.58.4.5 |Ferredoxin-like |Dimeric alpha+beta barrel |PG130-like |automated matches |Staphylococcus aureus [TaxId: 1280]
d1d0ia_ : (HIS58) (ALA82) [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Streptomyces coelicolor [TaxId: 1902]
d4nl5b_ : (GLU61) (GLU91) [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d1jw1a2 : (ALA604) (GLY653) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Goat (Capra hircus) [TaxId: 9925]
d2plaa1 : (LYS51) (SER79) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4fewc_ : (VAL61) (PRO91) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Acinetobacter baumannii [TaxId: 509173]
d3nela2 : (GLU240) (PRO279) [view usage] : d.104.1.0 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |automated matches |automated matches |Thermococcus kodakarensis [TaxId: 311400]
d1fnna2 : (PRO138) (GLY165) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |CDC6, N-domain |Pyrobaculum aerophilum [TaxId: 13773]
d1jv2b3 : (ASP606) (GLU644) [view usage] : d.200.1.1 |Integrin beta tail domain |Integrin beta tail domain |Integrin beta tail domain |Integrin beta tail domain |Human (Homo sapiens) [TaxId: 9606]
d2xzm4_ : (GLY186) (VAL223) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
d1ku0b_ : (GLY1115) (ALA1162) [view usage] : c.69.1.18 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Bacterial lipase |Lipase L1 |Bacillus stearothermophilus [TaxId: 1422]
d3qkvb_ : (PHE98) (ASP120) [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3u5cb_ : (GLN183) (LYS219) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
d3cf1a2 : (ARG210) (GLY245) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |Membrane fusion ATPase VCP/p97 |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.69, c.94, c.2, d.58, i.1, c.117, c.42, c.23, d.144, c.37, c.36, d.104, g.7, d.318, d.43, d.200