Tableau information
Concept source: d1c7za_ amino acid (a.a.) range (TYR118)(ILE141)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(TYR118) (ARG124) H1
(LEU125) (GLN135) H2
(ASN137) (ILE141) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -45.7° H2
E3 139.6° 146.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2xhva_ : (ILE539) (SER563) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Hepatitis C virus [TaxId: 11103]
d1wmaa1 : (PHE102) (VAL137) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Carbonyl reductase/20beta-hydroxysteroid dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
d1t0ub_ : (GLY71) (GLY93) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Uridine phosphorylase |Escherichia coli [TaxId: 562]
d1w2ta2 : (SER259) (SER278) [view usage] : b.67.2.3 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |Glycosyl hydrolases family 32 N-terminal domain |automated matches |Thermotoga maritima [TaxId: 243274]
d1n4ob_ : (CYS69) (GLY98) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Stenotrophomonas maltophilia, L2 [TaxId: 40324]
d4ttpa_ : (SER84) (ILE118) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Legionella pneumophila [TaxId: 272624]
d4h0oa2 : (GLY284) (ASP322) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Entamoeba (Entamoeba histolytica) [TaxId: 5759]
d1uypa2 : (SER259) (SER278) [view usage] : b.67.2.3 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |Glycosyl hydrolases family 32 N-terminal domain |Beta-fructosidase (invertase), N-terminal domain |Thermotoga maritima [TaxId: 2336]
d1u0ea_ : (LEU98) (GLY155) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Mouse (Mus musculus) [TaxId: 10090]
d3j39n_ : (GLY2) (ARG41) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Drosophila melanogaster [TaxId: 7227]
d3vwxc2 : (ASP89) (GLN129) [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |House fly (Musca domestica) [TaxId: 7370]
d2awzb_ : (ILE539) (HIS562) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Hepatitis C virus [TaxId: 11103]
d4a17l_ : (TYR4) (ARG41) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, cytoplasmic (60S subunit) |Tetrahymena thermophila [TaxId: 5911]
d4i1ua_ : (ASP76) (PRO112) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Burkholderia vietnamiensis [TaxId: 269482]
d3vwxa2 : (ASP89) (GLN129) [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |House fly (Musca domestica) [TaxId: 7370]
d2be3a1 : (THR2) (VAL46) [view usage] : d.218.1.8 |Nucleotidyltransferase |Nucleotidyltransferase |RelA/SpoT domain |Putative GTP pyrophosphokinase SP1097 |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2ooka1 : (THR30) (THR60) [view usage] : c.13.2.2 |SpoIIaa-like |SpoIIaa-like |Sfri0576-like |Hypothetical protein Sfri0576 |Shewanella frigidimarina [TaxId: 56812]
d1n5da_ : (PHE102) (VAL137) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Carbonyl reductase/20beta-hydroxysteroid dehydrogenase |Pig (Sus scrofa) [TaxId: 9823]
d1n5da_ : (SER242) (ASP270) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Carbonyl reductase/20beta-hydroxysteroid dehydrogenase |Pig (Sus scrofa) [TaxId: 9823]
d2omof_ : (ARG59) (GLY92) [view usage] : d.58.4.11 |Ferredoxin-like |Dimeric alpha+beta barrel |PA3566-like |Hypothetical protein NE0621 |Nitrosomonas europaea [TaxId: 915]
d3iava1 : (SER33) (ASP65) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Streptomyces coelicolor [TaxId: 1902]
d3hhka_ : (ILE539) (SER563) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Hepatitis c virus subtype 1b [TaxId: 31647]
d4lypa_ : (ALA208) (TRP257) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Rhizomucor miehei [TaxId: 4839]
d1ulwa_ : (THR106) (VAL141) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450-NOR, nitric reductase |Fungus (Fusarium oxysporum) [TaxId: 5507]
d1dika1 : (SER583) (TYR618) [view usage] : c.1.12.2 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |Pyruvate phosphate dikinase, C-terminal domain |Pyruvate phosphate dikinase, C-terminal domain |Clostridium symbiosum [TaxId: 1512]
d1s1il_ : (LYS4) (ALA39) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1ulaa_ : (PRO92) (ASN115) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Purine nucleoside phosphorylase, PNP |Human (Homo sapiens) [TaxId: 9606]
d4lyra_ : (ALA208) (TRP257) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Rhizomucor miehei [TaxId: 4839]
d1j7xa_ : (VAL120) (LEU148) [view usage] : c.14.1.2 |ClpP/crotonase |ClpP/crotonase |Tail specific protease, catalytic domain |Interphotoreceptor retinoid-binding protein IRBP |African clawed frog (Xenopus laevis) [TaxId: 8355]
d4fcua_ : (GLU101) (ALA133) [view usage] : c.68.1.0 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |automated matches |automated matches |Acinetobacter baumannii [TaxId: 400667]
d3tbfa_ : (ARG444) (GLY474) [view usage] : c.80.1.1 |SIS domain |SIS domain |double-SIS domain |automated matches |Francisella tularensis [TaxId: 119856]
d4hi7a2 : (ASP89) (GLN129) [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Drosophila mojavensis [TaxId: 7230]
d2omog_ : (ARG59) (GLY92) [view usage] : d.58.4.11 |Ferredoxin-like |Dimeric alpha+beta barrel |PA3566-like |Hypothetical protein NE0621 |Nitrosomonas europaea [TaxId: 915]
d2w6la_ : (ALA88) (LEU118) [view usage] : c.151.1.1 |CobE/GbiG C-terminal domain-like |CobE/GbiG C-terminal domain-like |CobE/GbiG C-terminal domain-like |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d2i6bb_ : (LYS146) (ALA168) [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |Adenosine kinase |Human (Homo sapiens) [TaxId: 9606]
d2oxca_ : (PRO247) (LEU266) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2q6za_ : (ASP123) (GLY156) [view usage] : c.1.22.1 |TIM beta/alpha-barrel |UROD/MetE-like |Uroporphyrinogen decarboxylase, UROD |Uroporphyrinogen decarboxylase, UROD |Human (Homo sapiens) [TaxId: 9606]
d2omod_ : (ARG59) (GLY92) [view usage] : d.58.4.11 |Ferredoxin-like |Dimeric alpha+beta barrel |PA3566-like |Hypothetical protein NE0621 |Nitrosomonas europaea [TaxId: 915]
d2cuna_ : (ILE125) (ALA148) [view usage] : c.86.1.0 |Phosphoglycerate kinase |Phosphoglycerate kinase |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d4lyqa_ : (ALA208) (TRP257) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Rhizomucor miehei [TaxId: 4839]
d2j0xb1 : (ILE159) (THR181) [view usage] : c.73.1.3 |Carbamate kinase-like |Carbamate kinase-like |PyrH-like |Aspartokinase |Escherichia coli [TaxId: 562]
d2omoe_ : (ARG59) (GLY92) [view usage] : d.58.4.11 |Ferredoxin-like |Dimeric alpha+beta barrel |PA3566-like |Hypothetical protein NE0621 |Nitrosomonas europaea [TaxId: 915]
d1u6za1 : (GLU400) (THR462) [view usage] : a.211.1.5 |HD-domain/PDEase-like |HD-domain/PDEase-like |Ppx associated domain |Exopolyphosphatase Ppx C-terminal domain |Escherichia coli [TaxId: 562]
d1mx1b_ : (ASP2409) (SER2454) [view usage] : c.69.1.1 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetylcholinesterase-like |Mammalian carboxylesterase (liver carboxylesterase I) |Human (Homo sapiens) [TaxId: 9606]
d3w0la2 : (THR353) (GLY403) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |African clawed frog (Xenopus laevis) [TaxId: 8355]
d1cfza_ : (ALA44) (ASP62) [view usage] : c.56.1.1 |Phosphorylase/hydrolase-like |HybD-like |Hydrogenase maturating endopeptidase HybD |Hydrogenase maturating endopeptidase HybD |Escherichia coli [TaxId: 562]
d2ap6a1 : (ASP73) (PHE100) [view usage] : d.58.4.13 |Ferredoxin-like |Dimeric alpha+beta barrel |NIPSNAP |Hypothetical protein Atu4242 |Agrobacterium tumefaciens [TaxId: 358]
d2iy5b6 : (ALA482) (TYR513) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |Phenyl-tRNA synthetase (PheRS) beta subunit, PheT, central domain |Thermus thermophilus [TaxId: 274]
d1esca_ : (LEU68) (GLY101) [view usage] : c.23.10.1 |Flavodoxin-like |SGNH hydrolase |Esterase |Esterase |Streptomyces scabies [TaxId: 1930]
d1nd4a_ : (PRO12) (THR28) [view usage] : d.144.1.6 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |APH phosphotransferases |Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) |Klebsiella pneumoniae [TaxId: 573]
d3zbwb_ : (THR49) (SER73) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2c0ha1 : (GLN53) (TRP79) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |endo-1,4-beta-mannosidase |Blue mussel (Mytilus edulis) [TaxId: 6550]
d4i1va_ : (ASP76) (PRO112) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Burkholderia vietnamiensis [TaxId: 269482]
d3ggsa_ : (PRO92) (ASN115) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Purine nucleoside phosphorylase, PNP |Human (Homo sapiens) [TaxId: 9606]
d3u5en_ : (ALA3) (ARG41) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
d4m85b_ : (PRO91) (PHE119) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Staphylococcus aureus [TaxId: 158878]
d1m73e_ : (PRO92) (ASN115) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Purine nucleoside phosphorylase, PNP |Human (Homo sapiens) [TaxId: 9606]
d2omoc_ : (ARG59) (GLY92) [view usage] : d.58.4.11 |Ferredoxin-like |Dimeric alpha+beta barrel |PA3566-like |Hypothetical protein NE0621 |Nitrosomonas europaea [TaxId: 915]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, e.3, c.1, c.69, a.104, c.2, d.58, i.1, c.68, b.67, c.56, c.80, c.14, a.211, c.72, c.23, d.144, c.37, d.104, c.55,
c.86, c.60, c.13, d.108, c.73, d.5, a.45, d.218, c.151