Tableau information
Concept source: d2quia_ amino acid (a.a.) range (PRO281)(CYS309)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO281) (SER290) H1
(PRO294) (ARG298) H2
(GLN304) (CYS309) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 19.7° H2
E3 137.9° 148.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1hkva2 : (ILE272) (GLU300) [view usage] : c.1.6.1 |TIM beta/alpha-barrel |PLP-binding barrel |Alanine racemase-like, N-terminal domain |Diaminopimelate decarboxylase LysA |Mycobacterium tuberculosis [TaxId: 1773]
d1s7ca2 : (SER149) (HIS177) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Escherichia coli [TaxId: 562]
d1zq7b_ : (THR69) (LEU106) [view usage] : d.309.1.1 |AMMECR1-like |AMMECR1-like |AMMECR1-like |automated matches |Methanosarcina mazei [TaxId: 2209]
d1u8fo2 : (CYS152) (HIS179) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Human (Homo sapiens), liver isoform [TaxId: 9606]
d3zvxa_ : (SER112) (THR140) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |automated matches |Platypodium elegans [TaxId: 115002]
d2o5ra1 : (GLU271) (PHE312) [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d1vdmg_ : (ALA34) (PHE60) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Pprobable purine phosphoribosyltransferase PH0095 |Pyrococcus horikoshii [TaxId: 53953]
d1npto2 : (ALA149) (HIS176) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Bacillus stearothermophilus, nca 1503 [TaxId: 1422]
d3ej8a_ : (ASP460) (GLU494) [view usage] : d.174.1.1 |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1gd1o2 : (CYS149) (HIS176) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Bacillus stearothermophilus, nca 1503 [TaxId: 1422]
d3g25a1 : (ASP47) (ASN80) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
d1sk8a_ : (LEU288) (PHE336) [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) |Aspergillus fumigatus [TaxId: 5085]
d1mlyb_ : (SER111) (PHE140) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA |Escherichia coli [TaxId: 562]
d4mqrb_ : (GLY124) (TRP153) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d1crwg2 : (CYS149) (HIS176) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
d2c0za1 : (HIS147) (SER165) [view usage] : b.82.1.1 |Double-stranded beta-helix |RmlC-like cupins |dTDP-sugar isomerase |Novobiocin biosynthesis protein NovW |Streptomyces caeruleus [TaxId: 195949]
d1dbvo2 : (CYS149) (HIS176) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Bacillus stearothermophilus, nca 1503 [TaxId: 1422]
d4rhab_ : (PRO309) (GLY340) [view usage] : d.79.7.0 |Bacillus chorismate mutase-like |OmpA-like |automated matches |automated matches |Salmonella enterica [TaxId: 99287]
d1rm5a2 : (CYS149) (HIS176) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Spinach (Spinacia oleracea) [TaxId: 3562]
d1xupo1 : (ALA50) (GLN83) [view usage] : c.55.1.4 |Ribonuclease H-like motif |Actin-like ATPase domain |Glycerol kinase |Glycerol kinase |Enterococcus casseliflavus [TaxId: 37734]
d1a7ka2 : (CYS166) (HIS194) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Trypanosome (Leishmania mexicana) [TaxId: 5665]
d1jn0a2 : (CYS149) (HIS176) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Spinach (Spinacia oleracea) [TaxId: 3562]
d1gq2a2 : (CYS174) (VAL205) [view usage] : c.58.1.3 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Malic enzyme N-domain |Mitochondrial NAD(P)-dependent malic enzyme |Domestic pigeon (Columba livia) [TaxId: 8932]
d2pkqo2 : (CYS149) (HIS176) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Spinach (Spinacia oleracea) [TaxId: 3562]
d1nq5a2 : (SER149) (HIS176) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Bacillus stearothermophilus, nca 1503 [TaxId: 1422]
d3urya2 : (SER241) (LYS273) [view usage] : d.15.6.0 |beta-Grasp (ubiquitin-like) |Superantigen toxins, C-terminal domain |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, b.82, c.67, b.29, c.26, c.55, d.81, c.60, d.174, c.61, d.79, d.15, c.58, d.309