Tableau information
Concept source: d2gwfe_ amino acid (a.a.) range (THR231)(TRP261)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR231) (ALA237) H1
(PRO240) (ARG250) H2
(TYR255) (TRP261) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -156.3° H2
E3 67.8° -131.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3rnba_ : (TRP317) (VAL350) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
d1onsa_ : (ASP210) (ILE242) [view usage] : c.23.16.2 |Flavodoxin-like |Class I glutamine amidotransferase-like |DJ-1/PfpI |HSP31 (HchA; YedU) |Escherichia coli [TaxId: 562]
d2gwfe_ : (THR231) (TRP261) [view usage] : c.46.1.4 |Rhodanese/Cell cycle control phosphatase |Rhodanese/Cell cycle control phosphatase |Ubiquitin carboxyl-terminal hydrolase 8, USP8 |Ubiquitin carboxyl-terminal hydrolase 8, USP8 |Human (Homo sapiens) [TaxId: 9606]
d1zvma_ : (THR148) (SER211) [view usage] : c.23.14.3 |Flavodoxin-like |N-(deoxy)ribosyltransferase-like |ADP ribosyl cyclase-like |ADP ribosyl cyclase |Human (Homo sapiens) [TaxId: 9606]
d3om2a_ : (LYS153) (SER175) [view usage] : b.67.2.2 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |Levansucrase |Levansucrase |Bacillus megaterium [TaxId: 1404]
d3byka_ : (LYS144) (SER166) [view usage] : b.67.2.2 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |Levansucrase |Levansucrase |Bacillus subtilis [TaxId: 1423]
d2nvpa1 : (ASP65) (LYS109) [view usage] : a.102.1.8 |alpha/alpha toroid |Six-hairpin glycosidases |CPF0428-like |Hypothetical protein CPF0428 |Clostridium perfringens [TaxId: 1502]
d2radb_ : (ASN314) (GLU345) [view usage] : c.150.1.3 |EreA/ChaN-like |EreA/ChaN-like |EreA-like |Succinoglycan biosynthesis protein BC3120 |Bacillus cereus [TaxId: 1396]
d1regy_ : (LYS51) (GLY89) [view usage] : d.58.27.1 |Ferredoxin-like |Translational regulator protein regA |Translational regulator protein regA |Translational regulator protein regA |Bacteriophage T4 [TaxId: 10665]
d1uaaa1 : (THR148) (PHE183) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |DEXX box DNA helicase |Escherichia coli, RepD [TaxId: 562]
d2btwa1 : (ALA114) (HIS143) [view usage] : d.3.1.14 |Cysteine proteinases |Cysteine proteinases |Phytochelatin synthase |Primitive phytochelatin synthase |Nostoc sp. PCC 7120 [TaxId: 103690]
d1oqra_ : (ASN64) (ASP103) [view usage] : d.15.4.1 |beta-Grasp (ubiquitin-like) |2Fe-2S ferredoxin-like |2Fe-2S ferredoxin-related |2Fe-2S ferredoxin |Pseudomonas putida, putidaredoxin [TaxId: 303]
d1iqpc2 : (ARG23) (HIS48) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |Replication factor C |Pyrococcus furiosus [TaxId: 2261]
d1dpea_ : (LYS437) (ARG485) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Dipeptide-binding protein |Escherichia coli [TaxId: 562]
d3qk8a_ : (MET161) (ASP190) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium marinum [TaxId: 216594]
d1j5qa1 : (TYR109) (ARG146) [view usage] : b.121.2.3 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group II dsDNA viruses VP |Major capsid protein vp54 |Major capsid protein vp54 |Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]
d1khre_ : (LYS7) (GLY33) [view usage] : b.81.1.3 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |Galactoside acetyltransferase-like |Xenobiotic acetyltransferase |Enterococcus faecium, VAT(D) [TaxId: 1352]
d3fdja_ : (HIS160) (THR186) [view usage] : c.119.1.0 |DAK1/DegV-like |DAK1/DegV-like |automated matches |automated matches |Eubacterium eligens [TaxId: 39485]
d2m1ia_ : (PHE36) (ARG61) [view usage] : d.26.1.0 |FKBP-like |FKBP-like |automated matches |automated matches |Cenarchaeum symbiosum [TaxId: 46770]
d1xtga_ : (THR395) (LYS417) [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |Botulinum neurotoxin |Clostridium botulinum, serotype A [TaxId: 1491]
d2rada1 : (ASN314) (GLU345) [view usage] : c.150.1.3 |EreA/ChaN-like |EreA/ChaN-like |EreA-like |Succinoglycan biosynthesis protein BC3120 |Bacillus cereus [TaxId: 1396]
d1rzua_ : (ALA85) (MET133) [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |Glycogen synthase 1, GlgA |Agrobacterium tumefaciens [TaxId: 358]
d2pjra1 : (PRO157) (ASP191) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |DEXX box DNA helicase |Bacillus stearothermophilus, PcrA [TaxId: 1422]
d2pjrf1 : (GLU859) (ASP891) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |DEXX box DNA helicase |Bacillus stearothermophilus, PcrA [TaxId: 1422]
d3b55a_ : (ASN314) (GLU345) [view usage] : c.150.1.3 |EreA/ChaN-like |EreA/ChaN-like |EreA-like |Succinoglycan biosynthesis protein BC3120 |Bacillus cereus [TaxId: 1396]
d2qeda1 : (LEU169) (PRO204) [view usage] : d.157.1.2 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Glyoxalase II (hydroxyacylglutathione hydrolase) |Glyoxalase II (hydroxyacylglutathione hydrolase) |Salmonella typhimurium [TaxId: 90371]
d1m4xa_ : (TYR109) (ARG146) [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |PBCV-1 virus capsid, quasi-atomic model |Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]
d2gwfa_ : (THR231) (TRP261) [view usage] : c.46.1.4 |Rhodanese/Cell cycle control phosphatase |Rhodanese/Cell cycle control phosphatase |Ubiquitin carboxyl-terminal hydrolase 8, USP8 |Ubiquitin carboxyl-terminal hydrolase 8, USP8 |Human (Homo sapiens) [TaxId: 9606]
d3byja_ : (SER146) (SER166) [view usage] : b.67.2.2 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |Levansucrase |Levansucrase |Bacillus subtilis [TaxId: 1423]
d4o98b_ : (GLU175) (THR210) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas oleovorans [TaxId: 301]
d4bfld1 : (HIS236) (GLY273) [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase II |Escherichia coli, HPII [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.5, b.81, c.94, d.58, b.67, d.157, a.102, d.92, c.14, i.6, c.23, c.37, b.121, d.3, c.87, a.25, d.15, c.46, d.26, c.119,
c.150