Tableau information
Concept source: d1fb1a_ amino acid (a.a.) range (GLY164)(GLU207)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY164) (SER176) H1
(GLN182) (ARG198) H2
(GLY201) (GLU207) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 141.8° H2
E3 -54.6° 154.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4jeyb_ : (PRO61) (ASN106) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Salmonella typhimurium [TaxId: 99287]
d4b1tb_ : (PHE10) (PRO38) [view usage] : d.40.1.1 |CI-2 family of serine protease inhibitors |CI-2 family of serine protease inhibitors |CI-2 family of serine protease inhibitors |automated matches |Medicinal leech (Hirudo medicinalis) [TaxId: 6421]
d1fj4a1 : (ARG62) (SER105) [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Beta-ketoacyl-ACP synthase I |Escherichia coli [TaxId: 562]
d4mata_ : (PRO8) (ASN74) [view usage] : d.127.1.1 |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Methionine aminopeptidase |Escherichia coli [TaxId: 562]
d2bdwa_ : (GLU96) (ASN135) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d1jgia2 : (THR450) (TYR485) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Amylosucrase |Neisseria polysaccharea [TaxId: 489]
d1sbni_ : (PHE10) (LEU37) [view usage] : d.40.1.1 |CI-2 family of serine protease inhibitors |CI-2 family of serine protease inhibitors |CI-2 family of serine protease inhibitors |Eglin C |Medicinal leech (Hirudo medicinalis) [TaxId: 6421]
d2oy9a1 : (SER54) (MSE90) [view usage] : a.276.1.1 |BH2638-like |BH2638-like |BH2638-like |Uncharacterized protein BH2638 |Bacillus halodurans [TaxId: 86665]
d2p19a1 : (SER65) (LYS91) [view usage] : d.190.1.2 |Chorismate lyase-like |Chorismate lyase-like |UTRA domain |Transcriptional regulator Cgl0157/Cg0196 |Corynebacterium glutamicum [TaxId: 1718]
d4jf1b_ : (PRO61) (ASN106) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Salmonella typhimurium [TaxId: 99287]
d1b7ba_ : (PRO53) (ASP117) [view usage] : c.73.1.1 |Carbamate kinase-like |Carbamate kinase-like |Carbamate kinase |Carbamate kinase |Enterococcus faecium [TaxId: 1352]
d1fb1a_ : (GLY164) (GLU207) [view usage] : d.96.1.1 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |GTP cyclohydrolase I |GTP cyclohydrolase I |Human (Homo sapiens) [TaxId: 9606]
d3l5za_ : (GLY154) (LYS184) [view usage] : d.190.1.0 |Chorismate lyase-like |Chorismate lyase-like |automated matches |automated matches |Bacillus cereus [TaxId: 222523]
d1yova_ : (GLN77) (GLU107) [view usage] : c.111.1.2 |Activating enzymes of the ubiquitin-like proteins |Activating enzymes of the ubiquitin-like proteins |Ubiquitin activating enzymes (UBA) |Amyloid beta precursor protein-binding protein 1, APPBP1 |Human (Homo sapiens) [TaxId: 9606]
d1g1ba_ : (GLY101) (PHE128) [view usage] : d.190.1.1 |Chorismate lyase-like |Chorismate lyase-like |Chorismate lyase |Chorismate lyase |Escherichia coli [TaxId: 562]
d1jd3a_ : (PRO22) (MET49) [view usage] : d.190.1.1 |Chorismate lyase-like |Chorismate lyase-like |Chorismate lyase |Chorismate lyase |Escherichia coli [TaxId: 562]
d4ijga2 : (PRO137) (ALA179) [view usage] : d.110.2.1 |Profilin-like |GAF domain-like |GAF domain |Bacteriophytochrome BphP |Deinococcus radiodurans [TaxId: 243230]
d4jz7c_ : (GLY56) (ASP120) [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Giardia lamblia [TaxId: 184922]
d2qwzd_ : (ASN40) (THR81) [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Silicibacter sp. [TaxId: 292414]
d1vaxa2 : (THR67) (GLN112) [view usage] : d.96.1.4 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |Urate oxidase (uricase) |Urate oxidase (uricase) |Arthrobacter globiformis [TaxId: 1665]
d2nwia1 : (ALA3) (THR31) [view usage] : d.190.1.3 |Chorismate lyase-like |Chorismate lyase-like |AF1396-like |Hypothetical protein AF1396 |Archaeoglobus fulgidus [TaxId: 2234]
d1ad2a_ : (TYR7) (LYS46) [view usage] : e.24.1.1 |Ribosomal protein L1 |Ribosomal protein L1 |Ribosomal protein L1 |Ribosomal protein L1 |Thermus thermophilus [TaxId: 274]
d4jewb_ : (PRO61) (ASN106) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Salmonella typhimurium [TaxId: 99287]
d3ksga_ : (ASN8) (GLN54) [view usage] : d.110.2.0 |Profilin-like |GAF domain-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 282458]
d4oo0a_ : (ASP48) (VAL97) [view usage] : c.51.4.0 |Anticodon-binding domain-like |ITPase-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d2j88a_ : (GLN127) (TYR183) [view usage] : c.1.8.9 |TIM beta/alpha-barrel |(Trans)glycosidases |Bee venom hyaluronidase |automated matches |Honeybee (Apis mellifera) [TaxId: 7460]
d1grua_ : (LYS142) (VAL177) [view usage] : i.16.1.1 |GroE chaperon |GroE chaperon |GroE chaperon |GroE chaperon |Escherichia coli [TaxId: 562]
d1ek4a1 : (ARG62) (SER105) [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Beta-ketoacyl-ACP synthase I |Escherichia coli [TaxId: 562]
d4i0ub1 : (THR70) (GLU103) [view usage] : d.328.1.1 |CorA soluble domain-like |CorA soluble domain-like |CorA soluble domain-like |automated matches |Thermotoga maritima [TaxId: 243274]
d3ek5a_ : (GLY54) (ALA104) [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Xanthomonas campestris pv. campestris [TaxId: 340]
d2wefa_ : (THR6) (GLU74) [view usage] : e.7.1.1 |Carbohydrate phosphatase |Carbohydrate phosphatase |Inositol monophosphatase/fructose-1,6-bisphosphatase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2va1e_ : (ILE58) (ALA100) [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Ureaplasma parvum [TaxId: 134821]
d1dd8a1 : (ARG62) (GLY106) [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Beta-ketoacyl-ACP synthase I |Escherichia coli [TaxId: 562]
d2hsjd_ : (GLY91) (SER128) [view usage] : c.23.10.3 |Flavodoxin-like |SGNH hydrolase |Acetylhydrolase |Uncharacterized protein SP1450 |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2jfra_ : (GLU193) (GLY233) [view usage] : d.219.1.0 |PP2C-like |PP2C-like |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d1stza2 : (ASP102) (GLU138) [view usage] : d.110.2.3 |Profilin-like |GAF domain-like |HrcA C-terminal domain-like |Heat-inducible transcription repressor HrcA, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d2o34a1 : (PRO83) (GLY128) [view usage] : d.96.2.2 |T-fold |ApbE-like |DVU1097-like |Hypothetical protein DVU1097 |Desulfovibrio vulgaris [TaxId: 881]
d2i6bb_ : (LYS25) (ALA62) [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |Adenosine kinase |Human (Homo sapiens) [TaxId: 9606]
d3gmwb_ : (ALA6) (GLY34) [view usage] : d.98.1.0 |BLIP-like |beta-lactamase-inhibitor protein, BLIP |automated matches |automated matches |Streptomyces exfoliatus [TaxId: 1905]
d2gtda2 : (GLY151) (THR217) [view usage] : c.55.1.13 |Ribonuclease H-like motif |Actin-like ATPase domain |CoaX-like |Type III pantothenate kinase, CoaX |Thermotoga maritima [TaxId: 2336]
d2bp7a_ : (PRO74) (THR132) [view usage] : c.36.1.11 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase PP module |automated matches |Pseudomonas putida [TaxId: 303]
d2ieca1 : (SER12) (SER70) [view usage] : d.316.1.1 |MK0786-like |MK0786-like |MK0786-like |Hypothetical protein MK0786 |Methanopyrus kandleri [TaxId: 2320]
d4g05a_ : (LYS89) (GLY125) [view usage] : a.93.1.0 |Heme-dependent peroxidases |Heme-dependent peroxidases |automated matches |automated matches |Pleurotus eryngii [TaxId: 5323]
d1sh8b_ : (PRO39) (PHE87) [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |Hypothetical protein PA5026 |Pseudomonas aeruginosa [TaxId: 287]
d4flqa1 : (THR450) (TYR485) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Neisseria polysaccharea [TaxId: 489]
d1w5ma_ : (VAL285) (THR323) [view usage] : c.1.10.3 |TIM beta/alpha-barrel |Aldolase |5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d3ueqa1 : (THR450) (TYR485) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Neisseria polysaccharea [TaxId: 489]
d1g4aa_ : (PRO127) (TYR173) [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |HslV (ClpQ) protease |Escherichia coli [TaxId: 562]
d2we4a_ : (VAL55) (ASP117) [view usage] : c.73.1.1 |Carbamate kinase-like |Carbamate kinase-like |Carbamate kinase |Carbamate kinase |Enterococcus faecalis [TaxId: 1351]
d2ckda1 : (ALA64) (ALA110) [view usage] : c.66.1.57 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |ML2640-like |Putative methyltransferase ML2640 |Mycobacterium leprae [TaxId: 1769]
d4mtdb_ : (THR4) (SER43) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Escherichia coli [TaxId: 83333]
d3bwga2 : (ASN151) (PHE172) [view usage] : d.190.1.2 |Chorismate lyase-like |Chorismate lyase-like |UTRA domain |Transcriptional regulator YydK |Bacillus subtilis [TaxId: 1423]
d3gzna_ : (GLN84) (GLU113) [view usage] : c.111.1.2 |Activating enzymes of the ubiquitin-like proteins |Activating enzymes of the ubiquitin-like proteins |Ubiquitin activating enzymes (UBA) |Amyloid beta precursor protein-binding protein 1, APPBP1 |Human (Homo sapiens) [TaxId: 9606]
d1wm9a1 : (LYS134) (GLY175) [view usage] : d.96.1.1 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |GTP cyclohydrolase I |GTP cyclohydrolase I |Thermus thermophilus [TaxId: 274]
d4a7xa_ : (ARG60) (ALA106) [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Helicobacter pylori [TaxId: 85962]
d2bwya2 : (SER177) (GLY236) [view usage] : d.127.1.1 |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Creatinase/aminopeptidase |automated matches |Escherichia coli [TaxId: 562]
d2c81a_ : (ASP16) (PRO62) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Bacillus circulans [TaxId: 1397]
d2jfsa_ : (GLU193) (GLY233) [view usage] : d.219.1.0 |PP2C-like |PP2C-like |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d2wfba_ : (ASN45) (THR73) [view usage] : c.55.5.0 |Ribonuclease H-like motif |Nitrogenase accessory factor-like |automated matches |automated matches |Desulfovibrio gigas [TaxId: 879]
d1xnza_ : (THR7) (ASN74) [view usage] : d.127.1.1 |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Methionine aminopeptidase |Escherichia coli [TaxId: 562]
d2nrac2 : (LEU159) (ILE192) [view usage] : a.4.5.10 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Replication initiation protein |Replication initiation protein PI |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.67, c.66, a.93, c.72, c.23, d.144, c.36, c.55, c.95, d.153, d.127, d.96, e.7, d.110, c.73, d.98, d.38, c.51, d.328,
c.111, i.16, a.4, d.219, e.24, a.276, d.190, d.40, d.316