Tableau information
Concept source: d1gisa_ amino acid (a.a.) range (ASN144)(LEU184)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN144) (TYR165) H1
(TYR165) (ARG175) H2
(LYS178) (LEU184) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -121.8° H2
E3 72.8° 155.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1cw0a_ : (TRP115) (THR149) [view usage] : c.52.1.15 |Restriction endonuclease-like |Restriction endonuclease-like |Very short patch repair (VSR) endonuclease |Very short patch repair (VSR) endonuclease |Escherichia coli [TaxId: 562]
d2g4aa_ : (GLN2) (ALA31) [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1odga_ : (TRP115) (THR149) [view usage] : c.52.1.15 |Restriction endonuclease-like |Restriction endonuclease-like |Very short patch repair (VSR) endonuclease |Very short patch repair (VSR) endonuclease |Escherichia coli [TaxId: 562]
d2vl6a_ : (TYR10) (GLU48) [view usage] : b.40.4.0 |OB-fold |Nucleic acid-binding proteins |automated matches |automated matches |Sulfolobus solfataricus [TaxId: 2287]
d1ltla_ : (SER7) (ASP42) [view usage] : b.40.4.11 |OB-fold |Nucleic acid-binding proteins |DNA replication initiator (cdc21/cdc54) N-terminal domain |DNA replication initiator (cdc21/cdc54) N-terminal domain |Methanobacterium thermoautotrophicum [TaxId: 145262]
d3ojca2 : (ASP152) (CYS198) [view usage] : c.78.2.0 |ATC-like |Aspartate/glutamate racemase |automated matches |automated matches |Yersinia pestis [TaxId: 214092]
d3u4wa_ : (ASP413) (ILE441) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |c-src tyrosine kinase |Chicken (Gallus gallus) [TaxId: 9031]
d2c5wb1 : (LEU442) (LYS498) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Penicillin-binding protein 1a, transpeptidase domain |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d3b84a_ : (HIS40) (PRO66) [view usage] : d.42.1.0 |POZ domain |POZ domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2aowa_ : (SER174) (ASP225) [view usage] : c.66.1.19 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Histamine methyltransferase |Histamine methyltransferase |Human (Homo sapiens) [TaxId: 9606]
d1r5pa_ : (LEU65) (TYR94) [view usage] : c.47.1.15 |Thioredoxin fold |Thioredoxin-like |KaiB-like |Circadian oscillation regulator KaiB |Cyanobacterium (Nostoc sp.) pcc 7120 [TaxId: 1180]
d2zc5b_ : (LEU442) (LYS498) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d4atja_ : (GLN176) (ASP222) [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Plant peroxidase |Horseradish (Armoracia rusticana) [TaxId: 3704]
d1xfja_ : (GLU232) (LEU259) [view usage] : d.194.1.2 |CNF1/YfiH-like putative cysteine hydrolases |CNF1/YfiH-like putative cysteine hydrolases |YfiH-like |Hypothetical protein CC0490 |Caulobacter crescentus [TaxId: 155892]
d3nyib_ : (LEU168) (LYS197) [view usage] : c.119.1.0 |DAK1/DegV-like |DAK1/DegV-like |automated matches |automated matches |Eubacterium ventriosum [TaxId: 411463]
d1o70a1 : (ALA328) (SER363) [view usage] : b.118.1.1 |FAS1 domain |FAS1 domain |FAS1 domain |Fasciclin I |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2i3wa_ : (GLU27) (ILE55) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Norway rat (Rattus norvegicus), GluR2 [TaxId: 10116]
d1jqea_ : (GLY178) (ASP225) [view usage] : c.66.1.19 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Histamine methyltransferase |Histamine methyltransferase |Human (Homo sapiens) [TaxId: 9606]
d1is2a3 : (PHE107) (TYR136) [view usage] : e.6.1.2 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |acyl-CoA oxidase N-terminal domains |Peroxisomal acyl-CoA oxidase-II, domains 1 and 2 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1xm8a_ : (THR172) (PRO208) [view usage] : d.157.1.2 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Glyoxalase II (hydroxyacylglutathione hydrolase) |Glyoxalase II (hydroxyacylglutathione hydrolase) |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1pdxa_ : (ASN64) (ASP103) [view usage] : d.15.4.1 |beta-Grasp (ubiquitin-like) |2Fe-2S ferredoxin-like |2Fe-2S ferredoxin-related |2Fe-2S ferredoxin |Pseudomonas putida, putidaredoxin [TaxId: 303]
d3keia_ : (GLU23) (ILE51) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1usyc_ : (SER188) (ASP224) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |ATP phosphoribosyltransferase regulatory subunit HisZ |Thermotoga maritima [TaxId: 2336]
d4pofa_ : (ASP2) (TRP46) [view usage] : b.40.4.0 |OB-fold |Nucleic acid-binding proteins |automated matches |automated matches |Pyrococcus furiosus [TaxId: 186497]
d4ooub_ : (THR198) (TRP243) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Cryptopygus antarcticus [TaxId: 187623]
d1t8ha_ : (GLU246) (GLU272) [view usage] : d.194.1.2 |CNF1/YfiH-like putative cysteine hydrolases |CNF1/YfiH-like putative cysteine hydrolases |YfiH-like |Hypothetical protein YlmD |Bacillus stearothermophilus [TaxId: 1422]
d1scha_ : (PHE179) (ASP214) [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Plant peroxidase |Peanut (Arachis hypogaea) [TaxId: 3818]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.3, c.1, c.94, d.157, c.66, a.93, d.165, d.144, b.40, d.104, c.47, e.6, d.194, c.78, c.52, d.15, a.29, d.42, c.119, b.118