Tableau information
Concept source: d1s70a_ amino acid (a.a.) range (GLN99)(ALA128)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN99) (TYR114) H1
(PHE118) (ARG122) E2
(GLY123) (ALA128) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -129.1° E2
H3 -103.3° -68.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1u81a_ : (LEU77) (ASP96) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |ADP-ribosylation factor |Human (Homo sapiens), ARF1 [TaxId: 9606]
d1wwra1 : (GLY107) (ILE150) [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |tRNA adenosine deaminase TadA |Aquifex aeolicus [TaxId: 63363]
d1xzwa2 : (GLU186) (ASP204) [view usage] : d.159.1.1 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Purple acid phosphatase-like |Plant purple acid phosphatase, catalytic domain |Sweet potato (Ipomoea batatas) [TaxId: 4120]
d2rd5a_ : (SER135) (GLY154) [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1fiqa2 : (PRO76) (GLY92) [view usage] : d.15.4.2 |beta-Grasp (ubiquitin-like) |2Fe-2S ferredoxin-like |2Fe-2S ferredoxin domains from multidomain proteins |Xanthine oxidase, N-terminal domain |Cow (Bos taurus) [TaxId: 9913]
d3rqzc_ : (PRO42) (ILE67) [view usage] : d.159.1.0 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |automated matches |automated matches |Sphaerobacter thermophilus [TaxId: 479434]
d1ciaa_ : (ARG18) (SER51) [view usage] : c.43.1.1 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |CAT-like |Chloramphenicol acetyltransferase, CAT |Escherichia coli [TaxId: 562]
d1s70a_ : (GLN99) (ALA128) [view usage] : d.159.1.3 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Protein serine/threonine phosphatase |Protein phosphatase-1 (PP-1) |Human (Homo sapiens), gamma isoform [TaxId: 9606]
d4hnoa_ : (GLN169) (GLY186) [view usage] : c.1.15.0 |TIM beta/alpha-barrel |Xylose isomerase-like |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d1f4ca_ : (LYS120) (MET141) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]
d1icia_ : (GLU3) (GLY28) [view usage] : c.31.1.5 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Sir2 family of transcriptional regulators |AF1676, Sir2 homolog (Sir2-AF1?) |Archaeoglobus fulgidus [TaxId: 2234]
d4pmua_ : (SER24) (GLY46) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Xanthomonas axonopodis [TaxId: 190486]
d2g8xa_ : (LYS120) (MET141) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]
d1xzwb2 : (GLU686) (ASP704) [view usage] : d.159.1.1 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Purple acid phosphatase-like |Plant purple acid phosphatase, catalytic domain |Sweet potato (Ipomoea batatas) [TaxId: 4120]
d2bdua1 : (PRO26) (ARG56) [view usage] : c.108.1.21 |HAD-like |HAD-like |Pyrimidine 5'-nucleotidase (UMPH-1) |Cytosolic 5'-nucleotidase III |Mouse (Mus musculus) [TaxId: 10090]
d1fo4a2 : (PRO76) (GLY92) [view usage] : d.15.4.2 |beta-Grasp (ubiquitin-like) |2Fe-2S ferredoxin-like |2Fe-2S ferredoxin domains from multidomain proteins |Xanthine oxidase, N-terminal domain |Cow (Bos taurus) [TaxId: 9913]
d2h2ia_ : (MET3) (GLY29) [view usage] : c.31.1.0 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d4i5ia_ : (ILE243) (GLY269) [view usage] : c.31.1.0 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1tp3a1 : (SER371) (GLU401) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Synaptic protein PSD-95 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3rdkb_ : (PRO6) (GLY28) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Paenibacillus sp. [TaxId: 324057]
d1yc2e_ : (MET1) (GLY31) [view usage] : c.31.1.5 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Sir2 family of transcriptional regulators |AF0112, Sir2 homolog (Sir2-AF2) |Archaeoglobus fulgidus [TaxId: 2234]
d1pd5a_ : (ARG18) (LYS52) [view usage] : c.43.1.1 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |CAT-like |Chloramphenicol acetyltransferase, CAT |Escherichia coli [TaxId: 562]
d1yf2a1 : (GLU57) (SER81) [view usage] : d.287.1.2 |DNA methylase specificity domain |DNA methylase specificity domain |Type I restriction modification DNA specificity domain |Bipartite methylase S protein MJ0130 |Methanocaldococcus jannaschii [TaxId: 2190]
d1h2as_ : (THR93) (GLY118) [view usage] : e.19.1.1 |HydA/Nqo6-like |HydA/Nqo6-like |Nickel-iron hydrogenase, small subunit |Nickel-iron hydrogenase, small subunit |Desulfovibrio vulgaris [TaxId: 881]
d2cuna_ : (GLN156) (TYR185) [view usage] : c.86.1.0 |Phosphoglycerate kinase |Phosphoglycerate kinase |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d4nv0b_ : (PRO32) (LYS62) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d3euba1 : (PRO76) (GLY92) [view usage] : d.15.4.2 |beta-Grasp (ubiquitin-like) |2Fe-2S ferredoxin-like |2Fe-2S ferredoxin domains from multidomain proteins |automated matches |Cow (Bos taurus) [TaxId: 9913]
d4iv5a1 : (ALA119) (GLY157) [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Trypanosoma cruzi [TaxId: 353153]
d1e3ta_ : (SER35) (VAL59) [view usage] : c.31.1.4 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Transhydrogenase domain III (dIII) |Transhydrogenase domain III (dIII) |Rhodospirillum rubrum [TaxId: 1085]
d2o8aa_ : (GLN99) (ALA128) [view usage] : d.159.1.3 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Protein serine/threonine phosphatase |Protein phosphatase-1 (PP-1) |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2h59a_ : (LYS4) (GLY29) [view usage] : c.31.1.5 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Sir2 family of transcriptional regulators |NAD-dependent deacetylase NpdA |Thermotoga maritima [TaxId: 2336]
d4joqb_ : (LYS252) (LEU287) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Rhodobacter sphaeroides [TaxId: 349102]
d4ilgb_ : (ASN1836) (ARG1859) [view usage] : c.55.3.14 |Ribonuclease H-like motif |Ribonuclease H-like |Prp8 beta-finger domain-like |Pre-mRNA-splicing factor 8, Prp8 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1dc3a2 : (TRP193) (LEU218) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Escherichia coli [TaxId: 562]
d4kxqa_ : (ILE243) (GLY269) [view usage] : c.31.1.0 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1vkib_ : (THR107) (GLU129) [view usage] : d.116.1.1 |YbaK/ProRS associated domain |YbaK/ProRS associated domain |YbaK/ProRS associated domain |Hypothetical protein Atu3699 |Agrobacterium tumefaciens, strain C58 [TaxId: 358]
d3vv4b_ : (GLU69) (GLN98) [view usage] : d.110.2.0 |Profilin-like |GAF domain-like |automated matches |automated matches |Thermosynechococcus elongatus [TaxId: 197221]
d3i9v33 : (SER487) (ASP514) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d3vv4a_ : (TRP71) (LEU99) [view usage] : d.110.2.0 |Profilin-like |GAF domain-like |automated matches |automated matches |Thermosynechococcus elongatus [TaxId: 197221]
d1m2na_ : (GLU3) (GLY28) [view usage] : c.31.1.5 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Sir2 family of transcriptional regulators |AF1676, Sir2 homolog (Sir2-AF1?) |Archaeoglobus fulgidus [TaxId: 2234]
d4ba4a_ : (LYS167) (GLY192) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Chromobacterium violaceum [TaxId: 536]
d1ywgo2 : (ASP198) (LEU224) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d1dbta_ : (LEU22) (GLU42) [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) |Bacillus subtilis [TaxId: 1423]
d4fogd_ : (ILE112) (MET141) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d1icib_ : (ASP2) (GLY28) [view usage] : c.31.1.5 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Sir2 family of transcriptional regulators |AF1676, Sir2 homolog (Sir2-AF1?) |Archaeoglobus fulgidus [TaxId: 2234]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.67, c.81, d.159, c.108, d.117, c.93, c.37, c.55, c.86, d.81, c.31, c.78, d.116, c.97, d.110, c.43, c.73, d.287, d.15,
e.19, b.36